| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789790
Identifier: 91789790
GI number: 91789790
Start: 4139946
End: 4140977
Strand: Direct
Name: 91789790
Synonym: Bpro_3950
Alternate gene names: NA
Gene position: 4139946-4140977 (Clockwise)
Preceding gene: 91789788
Following gene: 91789791
Centisome position: 79.61
GC content: 68.02
Gene sequence:
>1032_bases ATGACCAACCTCCAGACCCTGCTTGCCAGCTGCCTGCCGCCCGAAGCCGTGCAGCACATCCATGAGCAGATGTACGTTCA TCCTGCCCTGCAGTCCGGCGTGTCCGGCACGGTGACGCGCGCCGAACTGGCCCAGGCCCTGAACATGGCCCTGTTCCATG GGTTGGTGCAGCGGGTGCCGGCGGCGCAAGAGTACATGGCCAGCGATGTGGCCGGGCAACAGCGCCAGGTCGTCTTTGAC CACGGCGCGCTGCGTACCGTGCGCTGGCCCAGTGGCGCCTTGCCTCCGGGCGAAGCGGCCTTCACGCGGCTGCTGCGCCC GCTGGGTTTTACGCTGGAGGGCACCTACCCCTTGCCGCGCCTGAAGATGACCGGCCGCGCCTGGTGCCACCAGGATTTCC CGCAGGAGATCGCGCAGTTCTTTGTGTCCGAACTGCATCCCGAACAATTCACCGTGCCCTTCCAGGCCGCCGTTACGCGG GTGTTGTCCACCTCGCGCGACCCGCTGGGCCCGCAAGATGTGGCGGACCTGGAGCAGCTGGCGCGCGACGGCAAGCTGCC GCTGCAACAGGCGCTGCGGCTGCTGCCGGTGATGCTCCAGTGCTTTGACCGCCAGCATGGCGTGTTTGCGCTGGACGACT ATGAGCTGCTGCTAGCCGAGTCTGCCGAAATGGCCTGGATCGCCACCGAGGGCAACGCCTTCAACCACGCGACCGACCGC GTCGGCGATGTGGATGCGGTGGCCCGGCGCCAGCGCGAACTGGGCCGCCCCATCAAGGACGCGGTCGAAGTCTCGGCCAG TGGCCGCGTGCGCCAGACGGCGTTTCGTGCGGCGACGGTGCAGCGCGAATTCCTCACACCCGCCGGCCAGGTCACGCGCG CCGTGCCGGGTTCGTTTTATGAATTCATCACCCGCGCCGAGCTGCAAGCGAGCCCTGCCGCCAATGACCCGGCGCAAGGC ACCCGCCTCGACCTGGCCTTTGACGCCGGCAATGCCACCGGCATTTTCGGCATGACGGCGGCCCGCGCATGA
Upstream 100 bases:
>100_bases TCCTTTGCGCAGTGGCTGTGATTTCCCGAAAATCCGGCTTCCACCCGTTGAATTTACCCGCTGAAATCATCCGTCTTCAT CCGTCGAAATTACCCACGCA
Downstream 100 bases:
>100_bases GCCGCCGGGCCGCTCCCAAGGCCACTCCCAAGGCGAACACCGGAGCGCTTAGCGCGGAGGTTCACCCATGAGCGCAGCCG CGCGCACGCCGGTCCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MTNLQTLLASCLPPEAVQHIHEQMYVHPALQSGVSGTVTRAELAQALNMALFHGLVQRVPAAQEYMASDVAGQQRQVVFD HGALRTVRWPSGALPPGEAAFTRLLRPLGFTLEGTYPLPRLKMTGRAWCHQDFPQEIAQFFVSELHPEQFTVPFQAAVTR VLSTSRDPLGPQDVADLEQLARDGKLPLQQALRLLPVMLQCFDRQHGVFALDDYELLLAESAEMAWIATEGNAFNHATDR VGDVDAVARRQRELGRPIKDAVEVSASGRVRQTAFRAATVQREFLTPAGQVTRAVPGSFYEFITRAELQASPAANDPAQG TRLDLAFDAGNATGIFGMTAARA
Sequences:
>Translated_343_residues MTNLQTLLASCLPPEAVQHIHEQMYVHPALQSGVSGTVTRAELAQALNMALFHGLVQRVPAAQEYMASDVAGQQRQVVFD HGALRTVRWPSGALPPGEAAFTRLLRPLGFTLEGTYPLPRLKMTGRAWCHQDFPQEIAQFFVSELHPEQFTVPFQAAVTR VLSTSRDPLGPQDVADLEQLARDGKLPLQQALRLLPVMLQCFDRQHGVFALDDYELLLAESAEMAWIATEGNAFNHATDR VGDVDAVARRQRELGRPIKDAVEVSASGRVRQTAFRAATVQREFLTPAGQVTRAVPGSFYEFITRAELQASPAANDPAQG TRLDLAFDAGNATGIFGMTAARA >Mature_342_residues TNLQTLLASCLPPEAVQHIHEQMYVHPALQSGVSGTVTRAELAQALNMALFHGLVQRVPAAQEYMASDVAGQQRQVVFDH GALRTVRWPSGALPPGEAAFTRLLRPLGFTLEGTYPLPRLKMTGRAWCHQDFPQEIAQFFVSELHPEQFTVPFQAAVTRV LSTSRDPLGPQDVADLEQLARDGKLPLQQALRLLPVMLQCFDRQHGVFALDDYELLLAESAEMAWIATEGNAFNHATDRV GDVDAVARRQRELGRPIKDAVEVSASGRVRQTAFRAATVQREFLTPAGQVTRAVPGSFYEFITRAELQASPAANDPAQGT RLDLAFDAGNATGIFGMTAARA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37522; Mature: 37391
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS01159 WW_DOMAIN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLQTLLASCLPPEAVQHIHEQMYVHPALQSGVSGTVTRAELAQALNMALFHGLVQRVP CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC AAQEYMASDVAGQQRQVVFDHGALRTVRWPSGALPPGEAAFTRLLRPLGFTLEGTYPLPR HHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEECCCCCCC LKMTGRAWCHQDFPQEIAQFFVSELHPEQFTVPFQAAVTRVLSTSRDPLGPQDVADLEQL CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH ARDGKLPLQQALRLLPVMLQCFDRQHGVFALDDYELLLAESAEMAWIATEGNAFNHATDR HHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCEEEEEECCCCCCHHHHH VGDVDAVARRQRELGRPIKDAVEVSASGRVRQTAFRAATVQREFLTPAGQVTRAVPGSFY CCCHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHH EFITRAELQASPAANDPAQGTRLDLAFDAGNATGIFGMTAARA HHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCC >Mature Secondary Structure TNLQTLLASCLPPEAVQHIHEQMYVHPALQSGVSGTVTRAELAQALNMALFHGLVQRVP CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC AAQEYMASDVAGQQRQVVFDHGALRTVRWPSGALPPGEAAFTRLLRPLGFTLEGTYPLPR HHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEECCCCCCC LKMTGRAWCHQDFPQEIAQFFVSELHPEQFTVPFQAAVTRVLSTSRDPLGPQDVADLEQL CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH ARDGKLPLQQALRLLPVMLQCFDRQHGVFALDDYELLLAESAEMAWIATEGNAFNHATDR HHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCEEEEEECCCCCCHHHHH VGDVDAVARRQRELGRPIKDAVEVSASGRVRQTAFRAATVQREFLTPAGQVTRAVPGSFY CCCHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHH EFITRAELQASPAANDPAQGTRLDLAFDAGNATGIFGMTAARA HHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA