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The map label for this gene is kipR [H]

Identifier: 91789788

GI number: 91789788

Start: 4138047

End: 4138913

Strand: Direct

Name: kipR [H]

Synonym: Bpro_3948

Alternate gene names: 91789788

Gene position: 4138047-4138913 (Clockwise)

Preceding gene: 91789770

Following gene: 91789790

Centisome position: 79.57

GC content: 67.13

Gene sequence:

>867_bases
ATGGATGAAATTCATTCCGATGAAAGAGATGCCATGAAAGAGAATCCAAAAGAGGACGACAGCGCCTCGAGCAGCGTGCA
GCGCGCTTTTGCCATCCTGCGGGCCCTGGCCGCCACCCAGGCCAAGGGCGGGCGCATCACGCACATTGCCAAGGCCACGG
GGCTGACACAGGCCACCACCCACCGCCTGCTGCAAAGCCTGGTGGCCGAGCGCGTCGTGGAGCAGGACGCCGCGTCCAAG
CTCTACCGGCTGAGCATTGATTTTTTTGCGCTGGCCGCACAGGCCGGCAACTCGATGGACTTGCGCGCGCTGTGCCGCCC
ATCCATGCTGCGGCTGTGCGCCAGCCTGGGCGACACCATCTTTTTGCTGGTGCGCAGCGGCTTTGACGCGGTGTGCCTGG
ACCGCAGCGAAGGCCCCTTCCCGATCCGCTCCTTCACCGGCGACATCGGCGGCCGGGTGGCGCTGGGCATGGGCCAGGGC
AGCCTGGCCATCCTGGCCTTTTTGCCGGAGTCCGAACGCGAAGAGGTGATTCGCTACAACCTGCCGCGCATGCGCGAGTA
CGGCGTGTATGACGAGGTCTACCTGCGCACCGAAATCGAGCGGGTGCGCCAGACGGGCTATGCCGGGCGCAACACCGGCT
TGCTCGACGGCATGGCCGGCGTGGGTGTGCCGGTGCTGGACCGTGAAGGCCGCGCCGTGGCGGCGCTCAGCGTCGGCACG
ATCTCGTCGCGGCTCAGCCCTGACCGCCTGCCGACGGTGGTGGAATTGCTCAAGCGCGAGGCCACGGCCATCGGCGCGCA
GCTCAACCCTTTTGACAGCACGCTGCGCCGCCCGGCGCAAAGCCTGGCGCCTACAGACGGCGCCTGA

Upstream 100 bases:

>100_bases
ACGTTCATGCTAGGGCATCTCATAAAAAATCGTCAATAGGTTATTCCGTATATAGAGATATTTATTTAATTTATTCCGTT
TAATGGAATTTCTATAAGAT

Downstream 100 bases:

>100_bases
GCCGCTTTAAGGCGCCGCCTGTTCGCGCAGCCATTCGCGCAGCTGCAGCAGGGGCCGCCAGCTGGCCTTTTGCGTGGGCC
ACACCAGATAGTAGGCAAAG

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: Kip operon repressor protein [H]

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MDEIHSDERDAMKENPKEDDSASSSVQRAFAILRALAATQAKGGRITHIAKATGLTQATTHRLLQSLVAERVVEQDAASK
LYRLSIDFFALAAQAGNSMDLRALCRPSMLRLCASLGDTIFLLVRSGFDAVCLDRSEGPFPIRSFTGDIGGRVALGMGQG
SLAILAFLPESEREEVIRYNLPRMREYGVYDEVYLRTEIERVRQTGYAGRNTGLLDGMAGVGVPVLDREGRAVAALSVGT
ISSRLSPDRLPTVVELLKREATAIGAQLNPFDSTLRRPAQSLAPTDGA

Sequences:

>Translated_288_residues
MDEIHSDERDAMKENPKEDDSASSSVQRAFAILRALAATQAKGGRITHIAKATGLTQATTHRLLQSLVAERVVEQDAASK
LYRLSIDFFALAAQAGNSMDLRALCRPSMLRLCASLGDTIFLLVRSGFDAVCLDRSEGPFPIRSFTGDIGGRVALGMGQG
SLAILAFLPESEREEVIRYNLPRMREYGVYDEVYLRTEIERVRQTGYAGRNTGLLDGMAGVGVPVLDREGRAVAALSVGT
ISSRLSPDRLPTVVELLKREATAIGAQLNPFDSTLRRPAQSLAPTDGA
>Mature_288_residues
MDEIHSDERDAMKENPKEDDSASSSVQRAFAILRALAATQAKGGRITHIAKATGLTQATTHRLLQSLVAERVVEQDAASK
LYRLSIDFFALAAQAGNSMDLRALCRPSMLRLCASLGDTIFLLVRSGFDAVCLDRSEGPFPIRSFTGDIGGRVALGMGQG
SLAILAFLPESEREEVIRYNLPRMREYGVYDEVYLRTEIERVRQTGYAGRNTGLLDGMAGVGVPVLDREGRAVAALSVGT
ISSRLSPDRLPTVVELLKREATAIGAQLNPFDSTLRRPAQSLAPTDGA

Specific function: Transcriptional repressor of the kip gene-containing operon [H]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1788131, Length=257, Percent_Identity=28.0155642023346, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1786468, Length=241, Percent_Identity=27.3858921161826, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1786715, Length=255, Percent_Identity=27.4509803921569, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1789999, Length=269, Percent_Identity=25.6505576208178, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI87082359, Length=229, Percent_Identity=23.1441048034935, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 31166; Mature: 31166

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEIHSDERDAMKENPKEDDSASSSVQRAFAILRALAATQAKGGRITHIAKATGLTQATT
CCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCHHHHH
HRLLQSLVAERVVEQDAASKLYRLSIDFFALAAQAGNSMDLRALCRPSMLRLCASLGDTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHCHHE
FLLVRSGFDAVCLDRSEGPFPIRSFTGDIGGRVALGMGQGSLAILAFLPESEREEVIRYN
EHHHHCCCCEEEEECCCCCCCHHHHCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHC
LPRMREYGVYDEVYLRTEIERVRQTGYAGRNTGLLDGMAGVGVPVLDREGRAVAALSVGT
CCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCEECCCCCEEEEEEHHH
ISSRLSPDRLPTVVELLKREATAIGAQLNPFDSTLRRPAQSLAPTDGA
HHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDEIHSDERDAMKENPKEDDSASSSVQRAFAILRALAATQAKGGRITHIAKATGLTQATT
CCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCHHHHH
HRLLQSLVAERVVEQDAASKLYRLSIDFFALAAQAGNSMDLRALCRPSMLRLCASLGDTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHCHHE
FLLVRSGFDAVCLDRSEGPFPIRSFTGDIGGRVALGMGQGSLAILAFLPESEREEVIRYN
EHHHHCCCCEEEEECCCCCCCHHHHCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHC
LPRMREYGVYDEVYLRTEIERVRQTGYAGRNTGLLDGMAGVGVPVLDREGRAVAALSVGT
CCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCEECCCCCEEEEEEHHH
ISSRLSPDRLPTVVELLKREATAIGAQLNPFDSTLRRPAQSLAPTDGA
HHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]