| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789761
Identifier: 91789761
GI number: 91789761
Start: 4114543
End: 4115226
Strand: Reverse
Name: 91789761
Synonym: Bpro_3920
Alternate gene names: NA
Gene position: 4115226-4114543 (Counterclockwise)
Preceding gene: 91789762
Following gene: 91789760
Centisome position: 79.13
GC content: 66.81
Gene sequence:
>684_bases ATGGACGCAGTCACCCCCTTTCAAGCCGGCGGCAACACGGCCCGGCGCCCGCGCGGCCGGCCGCGCAAGACGCTGGGCGA ACGCGACGACGGCAACCGCCGCATGGAGCTGGTCAGCGCCGCGGCGAAGCTGTTTCGCCGCAAGGGATTTGACGGCGCCA GCACCCGCGACATCGCGGCCGCGGTGGGCATGCACAGCGGCTCGCCCTTTTATCACTTCAAGAGCAAGGGGGCACTGCTT CACGCGGTGATGGAGCAGGGCATGCGTTCGGCCCTGGACCGGCAGACCGCGGCCCTGCAGTCTGCCAGCCAATCAAAGTT CGATGCGTCTTCCTTGCTGCGCGTGCTGATCCGCAACCACTTCGATGTGCTGCTGGGGCCCGGCAGTGACTTCATTCCGG TGATGCTGTACGAGTCACGCTCCCTCACGGCGCGGCAGCGTGCGTCCATCGCCCGGCTGCGAAGCGACTATGAGTCGAAC TGGGAGCCGGTGCTCGAGGCCCTGGCCGAACAGGGCCGGCTCCACGGGCCGGTGACGCTGGCGCGCCTGTTGATCTTCGG TGCGCTGAACTGGTCGGTCCAGTGGTTTGACGCAAAAAAAGACGCGTCGCTGGATGACCTGACCGACGCGGCCCTGGCAC TGTTTCTGCACGCCCCGATGCGGGCCCGAAAAGTCACTGCATGA
Upstream 100 bases:
>100_bases CGGGGCTGTCCGAGGGAAGCGCGACCTCGGCCGTTGCCCTCCTTATTTTTACCAAGCATTTGCTTGTTAAAAATAAGGCG TTTTGGTATGGTGCTGAACC
Downstream 100 bases:
>100_bases CCATCAATACCATGACCCGATCTTCACCCCACCCCAAGCCTTCAGTTTTCGAATTTGAGGAAGAGTTCATCACCGGCCTG ACAAGCATGTTTGAAGAGAA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Regulator TetR/AcrR Families
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MDAVTPFQAGGNTARRPRGRPRKTLGERDDGNRRMELVSAAAKLFRRKGFDGASTRDIAAAVGMHSGSPFYHFKSKGALL HAVMEQGMRSALDRQTAALQSASQSKFDASSLLRVLIRNHFDVLLGPGSDFIPVMLYESRSLTARQRASIARLRSDYESN WEPVLEALAEQGRLHGPVTLARLLIFGALNWSVQWFDAKKDASLDDLTDAALALFLHAPMRARKVTA
Sequences:
>Translated_227_residues MDAVTPFQAGGNTARRPRGRPRKTLGERDDGNRRMELVSAAAKLFRRKGFDGASTRDIAAAVGMHSGSPFYHFKSKGALL HAVMEQGMRSALDRQTAALQSASQSKFDASSLLRVLIRNHFDVLLGPGSDFIPVMLYESRSLTARQRASIARLRSDYESN WEPVLEALAEQGRLHGPVTLARLLIFGALNWSVQWFDAKKDASLDDLTDAALALFLHAPMRARKVTA >Mature_227_residues MDAVTPFQAGGNTARRPRGRPRKTLGERDDGNRRMELVSAAAKLFRRKGFDGASTRDIAAAVGMHSGSPFYHFKSKGALL HAVMEQGMRSALDRQTAALQSASQSKFDASSLLRVLIRNHFDVLLGPGSDFIPVMLYESRSLTARQRASIARLRSDYESN WEPVLEALAEQGRLHGPVTLARLLIFGALNWSVQWFDAKKDASLDDLTDAALALFLHAPMRARKVTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25021; Mature: 25021
Theoretical pI: Translated: 11.01; Mature: 11.01
Prosite motif: PS50977 HTH_TETR_2 ; PS00354 HMGI_Y
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAVTPFQAGGNTARRPRGRPRKTLGERDDGNRRMELVSAAAKLFRRKGFDGASTRDIAA CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH AVGMHSGSPFYHFKSKGALLHAVMEQGMRSALDRQTAALQSASQSKFDASSLLRVLIRNH HHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC FDVLLGPGSDFIPVMLYESRSLTARQRASIARLRSDYESNWEPVLEALAEQGRLHGPVTL CCEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHH ARLLIFGALNWSVQWFDAKKDASLDDLTDAALALFLHAPMRARKVTA HHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHCCCC >Mature Secondary Structure MDAVTPFQAGGNTARRPRGRPRKTLGERDDGNRRMELVSAAAKLFRRKGFDGASTRDIAA CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH AVGMHSGSPFYHFKSKGALLHAVMEQGMRSALDRQTAALQSASQSKFDASSLLRVLIRNH HHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC FDVLLGPGSDFIPVMLYESRSLTARQRASIARLRSDYESNWEPVLEALAEQGRLHGPVTL CCEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHH ARLLIFGALNWSVQWFDAKKDASLDDLTDAALALFLHAPMRARKVTA HHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA