| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is gltJ [H]
Identifier: 91789745
GI number: 91789745
Start: 4097434
End: 4098156
Strand: Reverse
Name: gltJ [H]
Synonym: Bpro_3903
Alternate gene names: 91789745
Gene position: 4098156-4097434 (Counterclockwise)
Preceding gene: 91789746
Following gene: 91789744
Centisome position: 78.81
GC content: 58.78
Gene sequence:
>723_bases ATGACCTGGGATTGGCAAGTATTTTTGAATGACGATGGGAGCGGGCGCACTTACCTGCAGTGGATGATGGACGCCTGGGG CTGGACGCTGTCCGTCGCTGGCTGTTCCTGGGTCGTTGCCATCGTGATGGGCGGCATCATGGGCACGCTCAGAACCCTGC CCAACAGCCCCTGGCTGGTCCGGCTGGCCAATGTCTGGGTTGAAGTCTTTCGCAACGTTCCGTTGCTGGTTCAAATTTTC ATCTGGTATTTCGTCATACCCAAGATGTTTCCGGCGATGAGAGACCTGCCAGGCTTTGTGCTGGTCGTGTTTGCGCTGGG GTTTTTCACCTCGGCACGCATTGCCGAGCAAGTCAGGGCCGGTGTCCAGGCGCTGCCGCGAGGCCAGCGCTACGCCGGCA TGGCCATGGGTTTCACGACGGCCCAGACCTACCGCTATGTGATTTTGCCGATGGCGATTCGCATCATCATCCCGCCGCTG ACCAGCGAGTCGATGAACCTGCTGAAAAACTCGTCGGTGGCTTTTGCCGTGTCGATTGCCGAGCTGACGATGTTTGCGAT GCAGGCGCAGGAGGAAACGTCACGGGGCGTCGAGATTTATCTGGCCGTGACGGCGCTGTACGCCGTGTCGGCCTTTACCG TCAACCGGATCATGGCTTTCATTGAAAAGAAAGTGCAGATTCCGGGCTACATCGTGGCCGGCACCGCAGGTGGAGGACAC TGA
Upstream 100 bases:
>100_bases TTAAAACCAACCCCGCCTGCGACTTTTCTGGCGGGGTTTGTTGTTTGCTCCAGAGTAAAACAACGCGATAAAAACAAAAC TTATTTTTGGCGGAGTCACC
Downstream 100 bases:
>100_bases CATGCTTGGACTCGACCTGAGTTTCCTGAACTGGGACATCATTTCCAGGTTCGTCAAGAACGGTTTCATCTTCAGCATCC AGCTGACGGCGATCGCCACC
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MTWDWQVFLNDDGSGRTYLQWMMDAWGWTLSVAGCSWVVAIVMGGIMGTLRTLPNSPWLVRLANVWVEVFRNVPLLVQIF IWYFVIPKMFPAMRDLPGFVLVVFALGFFTSARIAEQVRAGVQALPRGQRYAGMAMGFTTAQTYRYVILPMAIRIIIPPL TSESMNLLKNSSVAFAVSIAELTMFAMQAQEETSRGVEIYLAVTALYAVSAFTVNRIMAFIEKKVQIPGYIVAGTAGGGH
Sequences:
>Translated_240_residues MTWDWQVFLNDDGSGRTYLQWMMDAWGWTLSVAGCSWVVAIVMGGIMGTLRTLPNSPWLVRLANVWVEVFRNVPLLVQIF IWYFVIPKMFPAMRDLPGFVLVVFALGFFTSARIAEQVRAGVQALPRGQRYAGMAMGFTTAQTYRYVILPMAIRIIIPPL TSESMNLLKNSSVAFAVSIAELTMFAMQAQEETSRGVEIYLAVTALYAVSAFTVNRIMAFIEKKVQIPGYIVAGTAGGGH >Mature_239_residues TWDWQVFLNDDGSGRTYLQWMMDAWGWTLSVAGCSWVVAIVMGGIMGTLRTLPNSPWLVRLANVWVEVFRNVPLLVQIFI WYFVIPKMFPAMRDLPGFVLVVFALGFFTSARIAEQVRAGVQALPRGQRYAGMAMGFTTAQTYRYVILPMAIRIIIPPLT SESMNLLKNSSVAFAVSIAELTMFAMQAQEETSRGVEIYLAVTALYAVSAFTVNRIMAFIEKKVQIPGYIVAGTAGGGH
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=240, Percent_Identity=39.5833333333333, Blast_Score=189, Evalue=1e-49, Organism=Escherichia coli, GI1787030, Length=206, Percent_Identity=32.0388349514563, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI1788226, Length=212, Percent_Identity=30.188679245283, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI48994930, Length=133, Percent_Identity=36.0902255639098, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1786873, Length=211, Percent_Identity=25.1184834123223, Blast_Score=87, Evalue=8e-19, Organism=Escherichia coli, GI87082239, Length=183, Percent_Identity=26.775956284153, Blast_Score=77, Evalue=8e-16, Organism=Escherichia coli, GI1787086, Length=215, Percent_Identity=25.1162790697674, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1788645, Length=163, Percent_Identity=26.3803680981595, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26695; Mature: 26564
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWDWQVFLNDDGSGRTYLQWMMDAWGWTLSVAGCSWVVAIVMGGIMGTLRTLPNSPWLV CCEEEEEEECCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHH RLANVWVEVFRNVPLLVQIFIWYFVIPKMFPAMRDLPGFVLVVFALGFFTSARIAEQVRA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH GVQALPRGQRYAGMAMGFTTAQTYRYVILPMAIRIIIPPLTSESMNLLKNSSVAFAVSIA HHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCEEEHHHH ELTMFAMQAQEETSRGVEIYLAVTALYAVSAFTVNRIMAFIEKKVQIPGYIVAGTAGGGH HHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC >Mature Secondary Structure TWDWQVFLNDDGSGRTYLQWMMDAWGWTLSVAGCSWVVAIVMGGIMGTLRTLPNSPWLV CEEEEEEECCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHH RLANVWVEVFRNVPLLVQIFIWYFVIPKMFPAMRDLPGFVLVVFALGFFTSARIAEQVRA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH GVQALPRGQRYAGMAMGFTTAQTYRYVILPMAIRIIIPPLTSESMNLLKNSSVAFAVSIA HHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCEEEHHHH ELTMFAMQAQEETSRGVEIYLAVTALYAVSAFTVNRIMAFIEKKVQIPGYIVAGTAGGGH HHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]