| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is gltK [H]
Identifier: 91789744
GI number: 91789744
Start: 4096764
End: 4097432
Strand: Reverse
Name: gltK [H]
Synonym: Bpro_3902
Alternate gene names: 91789744
Gene position: 4097432-4096764 (Counterclockwise)
Preceding gene: 91789745
Following gene: 91789743
Centisome position: 78.79
GC content: 57.25
Gene sequence:
>669_bases ATGCTTGGACTCGACCTGAGTTTCCTGAACTGGGACATCATTTCCAGGTTCGTCAAGAACGGTTTCATCTTCAGCATCCA GCTGACGGCGATCGCCACCCTGGGCGGCATTATTTTCGGCACCATTTTGGCGCTGATGCGTCTGTCCGGCCGCAAATTCC TGATGCTTCCGGCCACCTTTTACGTCAACGGCATGCGCTCCGTACCGCTGGTGATGGTGATCCTGTGGTTTTACCTGCTG GTGCCCACGCTGATAGGGCGGCCGATCGGGGCCGAGCTCTCGGCCATCATCACCTTCGTTGCGTTTGAAGCGGCTTATTT CAGCGAGATCATGCGGGCCGGCATCCAGTCCATTTCGCGCGGCCAGGTCCACGCCGGCCAGGCGCTGGGCATGACCTACG GCCAGAACATGCGCCTGGTGGTGCTGCCGCAGGCCTTTCGCAACATGGTGCCGATTTTGCTGACGCAGACCATCATCTTG TTTCAGGACACCTCGCTGGTTTACGCCATCGGTGCCTATGATTTGCTCAAAGGCCTGACAACCGCCGGCAAGATTTACGG CAGGCCCGAAGAGGCCTACCTGCTGGCCGCCGTGGTTTATTTCGTGATGTGTTTTGGCTTGTCGTATGTCGTCAAGCAGC TGCAAAACAAGATTGCCATTGTTCGATAG
Upstream 100 bases:
>100_bases GTGTCGGCCTTTACCGTCAACCGGATCATGGCTTTCATTGAAAAGAAAGTGCAGATTCCGGGCTACATCGTGGCCGGCAC CGCAGGTGGAGGACACTGAC
Downstream 100 bases:
>100_bases CAGTTCGATAACAGTTTGTTAAGGCTCCCCGGAGAATAAGATGATTCAACTCAAAGAAGTTTCCAAATGGTACGGTGCCG TGCAGGTGCTCAACAACTGC
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MLGLDLSFLNWDIISRFVKNGFIFSIQLTAIATLGGIIFGTILALMRLSGRKFLMLPATFYVNGMRSVPLVMVILWFYLL VPTLIGRPIGAELSAIITFVAFEAAYFSEIMRAGIQSISRGQVHAGQALGMTYGQNMRLVVLPQAFRNMVPILLTQTIIL FQDTSLVYAIGAYDLLKGLTTAGKIYGRPEEAYLLAAVVYFVMCFGLSYVVKQLQNKIAIVR
Sequences:
>Translated_222_residues MLGLDLSFLNWDIISRFVKNGFIFSIQLTAIATLGGIIFGTILALMRLSGRKFLMLPATFYVNGMRSVPLVMVILWFYLL VPTLIGRPIGAELSAIITFVAFEAAYFSEIMRAGIQSISRGQVHAGQALGMTYGQNMRLVVLPQAFRNMVPILLTQTIIL FQDTSLVYAIGAYDLLKGLTTAGKIYGRPEEAYLLAAVVYFVMCFGLSYVVKQLQNKIAIVR >Mature_222_residues MLGLDLSFLNWDIISRFVKNGFIFSIQLTAIATLGGIIFGTILALMRLSGRKFLMLPATFYVNGMRSVPLVMVILWFYLL VPTLIGRPIGAELSAIITFVAFEAAYFSEIMRAGIQSISRGQVHAGQALGMTYGQNMRLVVLPQAFRNMVPILLTQTIIL FQDTSLVYAIGAYDLLKGLTTAGKIYGRPEEAYLLAAVVYFVMCFGLSYVVKQLQNKIAIVR
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=210, Percent_Identity=48.0952380952381, Blast_Score=187, Evalue=6e-49, Organism=Escherichia coli, GI87082239, Length=202, Percent_Identity=29.7029702970297, Blast_Score=107, Evalue=5e-25, Organism=Escherichia coli, GI1788226, Length=205, Percent_Identity=34.6341463414634, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1786874, Length=189, Percent_Identity=31.7460317460317, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1787030, Length=205, Percent_Identity=28.2926829268293, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787087, Length=123, Percent_Identity=30.0813008130081, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI48994930, Length=133, Percent_Identity=30.8270676691729, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788645, Length=195, Percent_Identity=25.1282051282051, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1788646, Length=198, Percent_Identity=27.7777777777778, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24593; Mature: 24593
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGLDLSFLNWDIISRFVKNGFIFSIQLTAIATLGGIIFGTILALMRLSGRKFLMLPATF CCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHH YVNGMRSVPLVMVILWFYLLVPTLIGRPIGAELSAIITFVAFEAAYFSEIMRAGIQSISR HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GQVHAGQALGMTYGQNMRLVVLPQAFRNMVPILLTQTIILFQDTSLVYAIGAYDLLKGLT CCCCCCCHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHEEECCCCEEEHHHHHHHHHHH TAGKIYGRPEEAYLLAAVVYFVMCFGLSYVVKQLQNKIAIVR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLGLDLSFLNWDIISRFVKNGFIFSIQLTAIATLGGIIFGTILALMRLSGRKFLMLPATF CCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHH YVNGMRSVPLVMVILWFYLLVPTLIGRPIGAELSAIITFVAFEAAYFSEIMRAGIQSISR HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GQVHAGQALGMTYGQNMRLVVLPQAFRNMVPILLTQTIILFQDTSLVYAIGAYDLLKGLT CCCCCCCHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHEEECCCCEEEHHHHHHHHHHH TAGKIYGRPEEAYLLAAVVYFVMCFGLSYVVKQLQNKIAIVR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]