| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ywrD [H]
Identifier: 91789720
GI number: 91789720
Start: 4069259
End: 4070917
Strand: Reverse
Name: ywrD [H]
Synonym: Bpro_3878
Alternate gene names: 91789720
Gene position: 4070917-4069259 (Counterclockwise)
Preceding gene: 91789721
Following gene: 91789719
Centisome position: 78.28
GC content: 63.59
Gene sequence:
>1659_bases GTGCCAGACATTGCCACCATCCTGTTTCAAACCCTTGATAATCCCGTGATGGACTTCAACTTCAGCAACCCCTACACCTC GACCCGTATTCCCCTGTTTGCGCGCAATGTGGTTTCCACGTCCCATCCGCTGGGCGCGCAGGCCGGCCTGCGCATGCTGC TCAAGGGGGGCAATGCGGTGGATGCAGCCATTGCGGCCGCCGCCGCCATGGCCATCGTGGAGCCGGTCAGCAATGGTCTG GGGAGCGATTCTTTCTGCATCCTGTGGGACGGCAAGGACATGCATGGCCTGAACGCCTCGGGCCGCGCGCCGCAGAGCTG GACGCCCGAGTACTTCAAGCGCAAATACGGTGACAGCGCCACCACGCCACCCAAGCGCGGGATGGATTCAGTCAGCGTGC CCGGCGCCGTGGCGAGCTGGGTTGCCCTGAGTGAGCGTTTTGGTAAGCTGCCGTTCGCCGACCTGATGGAGCCTGCCATT GAAATCGCCGAGCGCGGCTATCTTCTGTCGCCGGTGGTGCAGCAGAAGTGGGCGGCCGCTACGGCCGAGTTGCAGTCGCA GCCCGGTTTTGCCGGTGCCTTCCTGCCCTGGGGCCGGGCGCCCAAGGTGGGCGAGCTGTTCCAGTTCAAGGCGGCGGCCA AAGCCCTGCGGGCCATCGCCCAGACCCGGGGCGCCGCGTATTACGGCGGCGAGATCGCCCACGCCATTGAAAAATTCTCC GCGCAAAACGGGGGCAGCATCACGGCGAAAGATTTTGAAGCCTACCAGCCTGAATGGATCCAGCCCATCACCAAGGACTA CCGCGGCTACACCCTGCACGAGATTCCCCCCAACGGGCAAGGCATTGCGGCCCTGATTGCGCTGGGCATCCTGGACAAGT TCGACGTCGCCGGCCTGCCCGTCGATGGTGTGGATTCGCAGCATCTGCAGATTGAAGCCATGAAGCTGGCATTTGCCGAC GTGTACCGGTATGTGGCCGAGCCGTCGTCAATGGAGGTGACGGCCGCGCAAATGCTCGATGACGCCTACCTGGCATCCCG TGCCAAACTCATCGACATGAAAAAGGCACAGGACTTTGGCGCTGGCAATCCGGTCAAGGGCGGCACGATTTACCTCACCG CCGCCGACGAAGACGGCATGATGGTGAGCTTCATCCAGAGCAACTACATGGGCTTTGGCTCGGGCTGTGTCGAGCCTGAA TTTGGCATCAGCCTGCAAAACCGCGGCCATGGCTTCAGCGTGCAGGCCGGCGTCAACCAGGTTGCACCCGGCAAGCGGCC CTTTCACACCATCATCCCGGCCTTCCTCAGCAAGGACGGCCAGCCCGTGATGAGCTTCGGCGTGATGGGCGCCAACATGC AGCCGCAGGGCCACCTGCAGACACTGGTGCGCATGCTGGACTATAGGCAGAGCCCGCAGGTGGCCTGCGATGCACCGCGC TGGCGCTACAACGAGGGCCTTGAAATCAACGTCGAAGCCGCGATGAACCCAGCGACCGTCCAGGGGCTGGCCGGGCGCGG CCACCGCATGGAGGTCATCAACGACTCCTACCAGGACTTCGGCGCCGGCCAGTTCATCTGGCGCGCCGGCAACCCCAAAG TGGAAGGCTATGTGTCGGCGAGCGACGCCCGTCGCGATGGCCAGGCCGTGGGTTTCTAA
Upstream 100 bases:
>100_bases TGCCGCCTCCGGGCGCTTTTTTTTTTCAGACTGATGATTCACTGTCTCGGCAACTTCGCACGCCTATCCCTGAAGGCACT CTTTCGTGGGCACGTGAGGT
Downstream 100 bases:
>100_bases AAGCGCATCTTGAGCGATATTTCAGAGTCAACAGCGCCTGCAAGCCAGGAAGCACAAGAACATAAAGCTGCAAAAAACAT AGCATCCGGCCTGTTGCTCG
Product: gamma-glutamyltransferase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 552; Mature: 551
Protein sequence:
>552_residues MPDIATILFQTLDNPVMDFNFSNPYTSTRIPLFARNVVSTSHPLGAQAGLRMLLKGGNAVDAAIAAAAAMAIVEPVSNGL GSDSFCILWDGKDMHGLNASGRAPQSWTPEYFKRKYGDSATTPPKRGMDSVSVPGAVASWVALSERFGKLPFADLMEPAI EIAERGYLLSPVVQQKWAAATAELQSQPGFAGAFLPWGRAPKVGELFQFKAAAKALRAIAQTRGAAYYGGEIAHAIEKFS AQNGGSITAKDFEAYQPEWIQPITKDYRGYTLHEIPPNGQGIAALIALGILDKFDVAGLPVDGVDSQHLQIEAMKLAFAD VYRYVAEPSSMEVTAAQMLDDAYLASRAKLIDMKKAQDFGAGNPVKGGTIYLTAADEDGMMVSFIQSNYMGFGSGCVEPE FGISLQNRGHGFSVQAGVNQVAPGKRPFHTIIPAFLSKDGQPVMSFGVMGANMQPQGHLQTLVRMLDYRQSPQVACDAPR WRYNEGLEINVEAAMNPATVQGLAGRGHRMEVINDSYQDFGAGQFIWRAGNPKVEGYVSASDARRDGQAVGF
Sequences:
>Translated_552_residues MPDIATILFQTLDNPVMDFNFSNPYTSTRIPLFARNVVSTSHPLGAQAGLRMLLKGGNAVDAAIAAAAAMAIVEPVSNGL GSDSFCILWDGKDMHGLNASGRAPQSWTPEYFKRKYGDSATTPPKRGMDSVSVPGAVASWVALSERFGKLPFADLMEPAI EIAERGYLLSPVVQQKWAAATAELQSQPGFAGAFLPWGRAPKVGELFQFKAAAKALRAIAQTRGAAYYGGEIAHAIEKFS AQNGGSITAKDFEAYQPEWIQPITKDYRGYTLHEIPPNGQGIAALIALGILDKFDVAGLPVDGVDSQHLQIEAMKLAFAD VYRYVAEPSSMEVTAAQMLDDAYLASRAKLIDMKKAQDFGAGNPVKGGTIYLTAADEDGMMVSFIQSNYMGFGSGCVEPE FGISLQNRGHGFSVQAGVNQVAPGKRPFHTIIPAFLSKDGQPVMSFGVMGANMQPQGHLQTLVRMLDYRQSPQVACDAPR WRYNEGLEINVEAAMNPATVQGLAGRGHRMEVINDSYQDFGAGQFIWRAGNPKVEGYVSASDARRDGQAVGF >Mature_551_residues PDIATILFQTLDNPVMDFNFSNPYTSTRIPLFARNVVSTSHPLGAQAGLRMLLKGGNAVDAAIAAAAAMAIVEPVSNGLG SDSFCILWDGKDMHGLNASGRAPQSWTPEYFKRKYGDSATTPPKRGMDSVSVPGAVASWVALSERFGKLPFADLMEPAIE IAERGYLLSPVVQQKWAAATAELQSQPGFAGAFLPWGRAPKVGELFQFKAAAKALRAIAQTRGAAYYGGEIAHAIEKFSA QNGGSITAKDFEAYQPEWIQPITKDYRGYTLHEIPPNGQGIAALIALGILDKFDVAGLPVDGVDSQHLQIEAMKLAFADV YRYVAEPSSMEVTAAQMLDDAYLASRAKLIDMKKAQDFGAGNPVKGGTIYLTAADEDGMMVSFIQSNYMGFGSGCVEPEF GISLQNRGHGFSVQAGVNQVAPGKRPFHTIIPAFLSKDGQPVMSFGVMGANMQPQGHLQTLVRMLDYRQSPQVACDAPRW RYNEGLEINVEAAMNPATVQGLAGRGHRMEVINDSYQDFGAGQFIWRAGNPKVEGYVSASDARRDGQAVGF
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=552, Percent_Identity=24.6376811594203, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI73915090, Length=552, Percent_Identity=24.6376811594203, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI73915096, Length=552, Percent_Identity=24.6376811594203, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI73915094, Length=552, Percent_Identity=24.6376811594203, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI109148539, Length=572, Percent_Identity=26.2237762237762, Blast_Score=116, Evalue=7e-26, Organism=Homo sapiens, GI113429324, Length=540, Percent_Identity=24.2592592592593, Blast_Score=112, Evalue=9e-25, Organism=Homo sapiens, GI113429326, Length=541, Percent_Identity=24.2144177449168, Blast_Score=109, Evalue=6e-24, Organism=Homo sapiens, GI153266901, Length=549, Percent_Identity=22.7686703096539, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI153266885, Length=548, Percent_Identity=22.8102189781022, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI153266907, Length=545, Percent_Identity=21.8348623853211, Blast_Score=80, Evalue=6e-15, Organism=Escherichia coli, GI1789856, Length=497, Percent_Identity=28.169014084507, Blast_Score=191, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17506189, Length=527, Percent_Identity=24.0986717267552, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17542894, Length=477, Percent_Identity=25.9958071278826, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI212646519, Length=494, Percent_Identity=23.4817813765182, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI72000294, Length=494, Percent_Identity=23.2793522267206, Blast_Score=105, Evalue=6e-23, Organism=Caenorhabditis elegans, GI193208245, Length=489, Percent_Identity=23.3128834355828, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI193208247, Length=489, Percent_Identity=23.3128834355828, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24642670, Length=568, Percent_Identity=26.056338028169, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24642666, Length=568, Percent_Identity=26.056338028169, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI161077878, Length=568, Percent_Identity=26.056338028169, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI45551474, Length=568, Percent_Identity=26.056338028169, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI161077880, Length=568, Percent_Identity=26.056338028169, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI18859893, Length=496, Percent_Identity=24.7983870967742, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI18859741, Length=509, Percent_Identity=25.147347740668, Blast_Score=106, Evalue=5e-23, Organism=Drosophila melanogaster, GI161077496, Length=502, Percent_Identity=23.5059760956175, Blast_Score=97, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 59379; Mature: 59248
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDIATILFQTLDNPVMDFNFSNPYTSTRIPLFARNVVSTSHPLGAQAGLRMLLKGGNAV CCHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCHH DAAIAAAAAMAIVEPVSNGLGSDSFCILWDGKDMHGLNASGRAPQSWTPEYFKRKYGDSA HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC TTPPKRGMDSVSVPGAVASWVALSERFGKLPFADLMEPAIEIAERGYLLSPVVQQKWAAA CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEECHHHHHHHHHH TAELQSQPGFAGAFLPWGRAPKVGELFQFKAAAKALRAIAQTRGAAYYGGEIAHAIEKFS HHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHH AQNGGSITAKDFEAYQPEWIQPITKDYRGYTLHEIPPNGQGIAALIALGILDKFDVAGLP CCCCCEEEECCHHCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCC VDGVDSQHLQIEAMKLAFADVYRYVAEPSSMEVTAAQMLDDAYLASRAKLIDMKKAQDFG CCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC AGNPVKGGTIYLTAADEDGMMVSFIQSNYMGFGSGCVEPEFGISLQNRGHGFSVQAGVNQ CCCCCCCCEEEEEEECCCCCEEEEEHHCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCC VAPGKRPFHTIIPAFLSKDGQPVMSFGVMGANMQPQGHLQTLVRMLDYRQSPQVACDAPR CCCCCCCHHHHHHHHHCCCCCHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCCCEECCCC WRYNEGLEINVEAAMNPATVQGLAGRGHRMEVINDSYQDFGAGQFIWRAGNPKVEGYVSA CCCCCCCEEEEEECCCCHHHHHHCCCCCEEEECCCCHHHCCCCEEEEECCCCCEEEEEEC SDARRDGQAVGF CCCCCCCCCCCC >Mature Secondary Structure PDIATILFQTLDNPVMDFNFSNPYTSTRIPLFARNVVSTSHPLGAQAGLRMLLKGGNAV CHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCHH DAAIAAAAAMAIVEPVSNGLGSDSFCILWDGKDMHGLNASGRAPQSWTPEYFKRKYGDSA HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC TTPPKRGMDSVSVPGAVASWVALSERFGKLPFADLMEPAIEIAERGYLLSPVVQQKWAAA CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEECHHHHHHHHHH TAELQSQPGFAGAFLPWGRAPKVGELFQFKAAAKALRAIAQTRGAAYYGGEIAHAIEKFS HHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHH AQNGGSITAKDFEAYQPEWIQPITKDYRGYTLHEIPPNGQGIAALIALGILDKFDVAGLP CCCCCEEEECCHHCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCC VDGVDSQHLQIEAMKLAFADVYRYVAEPSSMEVTAAQMLDDAYLASRAKLIDMKKAQDFG CCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC AGNPVKGGTIYLTAADEDGMMVSFIQSNYMGFGSGCVEPEFGISLQNRGHGFSVQAGVNQ CCCCCCCCEEEEEEECCCCCEEEEEHHCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCC VAPGKRPFHTIIPAFLSKDGQPVMSFGVMGANMQPQGHLQTLVRMLDYRQSPQVACDAPR CCCCCCCHHHHHHHHHCCCCCHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCCCEECCCC WRYNEGLEINVEAAMNPATVQGLAGRGHRMEVINDSYQDFGAGQFIWRAGNPKVEGYVSA CCCCCCCEEEEEECCCCHHHHHHCCCCCEEEECCCCHHHCCCCEEEEECCCCCEEEEEEC SDARRDGQAVGF CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]