Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789507

Identifier: 91789507

GI number: 91789507

Start: 3855415

End: 3855780

Strand: Reverse

Name: 91789507

Synonym: Bpro_3657

Alternate gene names: NA

Gene position: 3855780-3855415 (Counterclockwise)

Preceding gene: 91789508

Following gene: 91789506

Centisome position: 74.15

GC content: 59.56

Gene sequence:

>366_bases
ATGGATGAGCTGTTACCCCTGTGCAATGCCAGCGACCTGGTCGAAGGCGGGGAGGCAGTGCCCTTCGATATCGACTATGC
CGGTCTGACCTGCCGGGCTTTTGCCATTCGCTTCGAGGGCCTGCCGCATGCTTACCTGAACCGCTGCACGCATGTGGCCA
TGGAACTCGACTGGCAGCCCAACCAGGTGTTTGACGACAGCGGACAATGGCTGCTGTGCGCCAGCCATGGTGCGGCTTAC
CGGCCTGATACCGGCCAGTGCGCAGGCGGCCCCTGCCAGGGCGGGTTGATCAAAATCACGCTTTCGGAAAATGACGGGGT
TGTTTATTGGCATTCCGCTTACAACCTCAGACCGGTACAGTTCTAA

Upstream 100 bases:

>100_bases
CCTGGCGCCGCGCCACGTGGCCCATTCGGTGCAGGACCTCCATGACTGGCTGCTGGCCAATGGCTAGTAATGGCTAGTAC
TAGCGACTGAAGGGCTTCCT

Downstream 100 bases:

>100_bases
TACTTCTCTAAACTAGCGACCATGAACGAATCCAACCGCCCCGACAATCCGAACGACACCTCTCCTGATCTCCTGCGGGA
GTCGGATTTCAGGCCGAACC

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: Rieske Domain-Containing Protein; Rieske Region; Ferredoxin; Rieske Protein; Rieske; Rieske 2Fe-2S Family Protein; Rieske Iron-Sulfur Domain Protein; Ferredoxin Protein; Nitrite Reductase Ferredoxin Subunit; Rieske Iron-Sulfur Domain-Containing Protein

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MDELLPLCNASDLVEGGEAVPFDIDYAGLTCRAFAIRFEGLPHAYLNRCTHVAMELDWQPNQVFDDSGQWLLCASHGAAY
RPDTGQCAGGPCQGGLIKITLSENDGVVYWHSAYNLRPVQF

Sequences:

>Translated_121_residues
MDELLPLCNASDLVEGGEAVPFDIDYAGLTCRAFAIRFEGLPHAYLNRCTHVAMELDWQPNQVFDDSGQWLLCASHGAAY
RPDTGQCAGGPCQGGLIKITLSENDGVVYWHSAYNLRPVQF
>Mature_121_residues
MDELLPLCNASDLVEGGEAVPFDIDYAGLTCRAFAIRFEGLPHAYLNRCTHVAMELDWQPNQVFDDSGQWLLCASHGAAY
RPDTGQCAGGPCQGGLIKITLSENDGVVYWHSAYNLRPVQF

Specific function: Unknown

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13292; Mature: 13292

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDELLPLCNASDLVEGGEAVPFDIDYAGLTCRAFAIRFEGLPHAYLNRCTHVAMELDWQP
CCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCCHHHHHHHEEEEEEECCCC
NQVFDDSGQWLLCASHGAAYRPDTGQCAGGPCQGGLIKITLSENDGVVYWHSAYNLRPVQ
CEEECCCCCEEEEECCCCEECCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEC
F
C
>Mature Secondary Structure
MDELLPLCNASDLVEGGEAVPFDIDYAGLTCRAFAIRFEGLPHAYLNRCTHVAMELDWQP
CCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCCHHHHHHHEEEEEEECCCC
NQVFDDSGQWLLCASHGAAYRPDTGQCAGGPCQGGLIKITLSENDGVVYWHSAYNLRPVQ
CEEECCCCCEEEEECCCCEECCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEC
F
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA