| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789494
Identifier: 91789494
GI number: 91789494
Start: 3845227
End: 3845625
Strand: Reverse
Name: 91789494
Synonym: Bpro_3644
Alternate gene names: NA
Gene position: 3845625-3845227 (Counterclockwise)
Preceding gene: 91789495
Following gene: 91789493
Centisome position: 73.95
GC content: 63.66
Gene sequence:
>399_bases ATGGCGCTGCTCCTTGCCGCTGTATGCGGTACGGGCGTCCTCGCATGGGGCGGTTGGAAAAAAGTTCCGTGTGGCAAGCT GGCATGGGACGGCGAATTCTGGCGCTGGGAAAGCCTGGCCTACCAGGCGGGCGTTGCCGGGTATGAACTCTCGGTGGTGG CTGATTTCCAGCACTTGCTGCTGCTCCGGCTTCAGAATCCGGCGCGCGCCGGACTCTGGCTTTGGGCGGAGCAAAGGGCA TTGCCAGAGCGCTGGCTGGACTTGCGCCGGGCGGTGTATTCCCCGCACAAGCCGGCAGGCGCTTCCCGCTCATTGGACGG GATGCCTGCAGAGCCGTTGCCGGCTGTGGCAGTATCGGGCCATGAGTTTCCTGTTGATGCCACACGGATGAAGCCATGA
Upstream 100 bases:
>100_bases GCGTTCGCGTTTCCACGGCTGGCTATTGCTGGGTTTGTGGCTGGCGGGTTTGCTGCCGGTATTGGTTTGGGTTTACCTTG CCCGTCAACTGGATTGGCGG
Downstream 100 bases:
>100_bases CTGCGGACGGGACACCCCTGCCATCCGAAAAAGCGGCTGATAGCGACGCCATGCTGGTCGAGCGCGCCGTGGCCGGGGAC CAAAAGGCCTTTGAGCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MALLLAAVCGTGVLAWGGWKKVPCGKLAWDGEFWRWESLAYQAGVAGYELSVVADFQHLLLLRLQNPARAGLWLWAEQRA LPERWLDLRRAVYSPHKPAGASRSLDGMPAEPLPAVAVSGHEFPVDATRMKP
Sequences:
>Translated_132_residues MALLLAAVCGTGVLAWGGWKKVPCGKLAWDGEFWRWESLAYQAGVAGYELSVVADFQHLLLLRLQNPARAGLWLWAEQRA LPERWLDLRRAVYSPHKPAGASRSLDGMPAEPLPAVAVSGHEFPVDATRMKP >Mature_131_residues ALLLAAVCGTGVLAWGGWKKVPCGKLAWDGEFWRWESLAYQAGVAGYELSVVADFQHLLLLRLQNPARAGLWLWAEQRAL PERWLDLRRAVYSPHKPAGASRSLDGMPAEPLPAVAVSGHEFPVDATRMKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14546; Mature: 14415
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLLAAVCGTGVLAWGGWKKVPCGKLAWDGEFWRWESLAYQAGVAGYELSVVADFQHLL CHHHHHHHHCCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCEEEEEHHHHHHHH LLRLQNPARAGLWLWAEQRALPERWLDLRRAVYSPHKPAGASRSLDGMPAEPLPAVAVSG HHHCCCCCCCCEEEEEHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECC HEFPVDATRMKP CCCCCCCCCCCC >Mature Secondary Structure ALLLAAVCGTGVLAWGGWKKVPCGKLAWDGEFWRWESLAYQAGVAGYELSVVADFQHLL HHHHHHHHCCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCEEEEEHHHHHHHH LLRLQNPARAGLWLWAEQRALPERWLDLRRAVYSPHKPAGASRSLDGMPAEPLPAVAVSG HHHCCCCCCCCEEEEEHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECC HEFPVDATRMKP CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA