| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789492
Identifier: 91789492
GI number: 91789492
Start: 3843820
End: 3844419
Strand: Reverse
Name: 91789492
Synonym: Bpro_3642
Alternate gene names: NA
Gene position: 3844419-3843820 (Counterclockwise)
Preceding gene: 91789493
Following gene: 91789491
Centisome position: 73.93
GC content: 65.67
Gene sequence:
>600_bases ATGTCTGCCCTGGCCGATGGCCAGCTGGGTGGTGAGGACTTTGCCGCCGCACTTCAGGCCTGCCAGCACGACGAATCTGC GTTTGCCAGCTGGGCCGCCTACCATGTGATCGGCGAGGTGTTGCGGTCCCCTGAGCCCGTGGTGCACGGGGCGGACCTGG CCTTTCTGGGGCGGCTGAACCAGCGCCTTTCGCAAGAGCCACAAGAGCCGTTGCTTCGGGCGCGCCACCAGCCTGTTCCC CCTGATTCAGCGGCGCAAGCCAGGGGAAAAACTGGTGCGAACGTGGTCCACCACCGCGGCGCGGCATCCAATGACAGCAT GCTGCCCTGGAAGTGGGTGGCCGGCGTTGCTTCCCTGGCAGCCATTTCCGCCATCGCGTGGAACGCCTCGGGCCTGCTGA TGCCTGATGCACCGCAGCTTGCCCAAGGCCCGGCTCAGCAGGTGCTGGTGGCTTCACCGCAGGGTCCGATAGTGCGCGAT GCCCGGCTGGAGGAGCTGCTGGCCGCACACAAGCAGTTGGGTGGTGCATCCGCCTTGCAGGTGCCGTCGGGGTTTTTGCG AAACGCCACCTTTGAAACGCCTCAGAATGCAGGGCGTTGA
Upstream 100 bases:
>100_bases ATGAATAACGCCCTGTCTTTCAGCCTTTAAAGCCTTTAATAAACCGGCAGGCCCACTGCCCATGAACATCATGAAACCGT CTATGCAAACCAGTGAACTC
Downstream 100 bases:
>100_bases ATGAGCTTTTGCTGCGGCAGAGCCTTCAAAACAACCATGAATTTCAAGACTTATCGCCTTGTGGCCTTTTTTGTTTGGCC ACTCGCCGCTATGAATTATG
Product: anti sigma-E protein RseA
Products: NA
Alternate protein names: Anti Sigma-E Protein Rsea
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MSALADGQLGGEDFAAALQACQHDESAFASWAAYHVIGEVLRSPEPVVHGADLAFLGRLNQRLSQEPQEPLLRARHQPVP PDSAAQARGKTGANVVHHRGAASNDSMLPWKWVAGVASLAAISAIAWNASGLLMPDAPQLAQGPAQQVLVASPQGPIVRD ARLEELLAAHKQLGGASALQVPSGFLRNATFETPQNAGR
Sequences:
>Translated_199_residues MSALADGQLGGEDFAAALQACQHDESAFASWAAYHVIGEVLRSPEPVVHGADLAFLGRLNQRLSQEPQEPLLRARHQPVP PDSAAQARGKTGANVVHHRGAASNDSMLPWKWVAGVASLAAISAIAWNASGLLMPDAPQLAQGPAQQVLVASPQGPIVRD ARLEELLAAHKQLGGASALQVPSGFLRNATFETPQNAGR >Mature_198_residues SALADGQLGGEDFAAALQACQHDESAFASWAAYHVIGEVLRSPEPVVHGADLAFLGRLNQRLSQEPQEPLLRARHQPVPP DSAAQARGKTGANVVHHRGAASNDSMLPWKWVAGVASLAAISAIAWNASGLLMPDAPQLAQGPAQQVLVASPQGPIVRDA RLEELLAAHKQLGGASALQVPSGFLRNATFETPQNAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20849; Mature: 20717
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALADGQLGGEDFAAALQACQHDESAFASWAAYHVIGEVLRSPEPVVHGADLAFLGRLN CCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH QRLSQEPQEPLLRARHQPVPPDSAAQARGKTGANVVHHRGAASNDSMLPWKWVAGVASLA HHHHCCHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHH AISAIAWNASGLLMPDAPQLAQGPAQQVLVASPQGPIVRDARLEELLAAHKQLGGASALQ HHHHHHCCCCCCCCCCCCHHHCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHH VPSGFLRNATFETPQNAGR CCCHHHHCCCCCCCCCCCC >Mature Secondary Structure SALADGQLGGEDFAAALQACQHDESAFASWAAYHVIGEVLRSPEPVVHGADLAFLGRLN CCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH QRLSQEPQEPLLRARHQPVPPDSAAQARGKTGANVVHHRGAASNDSMLPWKWVAGVASLA HHHHCCHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHH AISAIAWNASGLLMPDAPQLAQGPAQQVLVASPQGPIVRDARLEELLAAHKQLGGASALQ HHHHHHCCCCCCCCCCCCHHHCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHH VPSGFLRNATFETPQNAGR CCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA