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The map label for this gene is sdhD [H]

Identifier: 91789452

GI number: 91789452

Start: 3802925

End: 3803290

Strand: Direct

Name: sdhD [H]

Synonym: Bpro_3601

Alternate gene names: 91789452

Gene position: 3802925-3803290 (Clockwise)

Preceding gene: 91789451

Following gene: 91789453

Centisome position: 73.13

GC content: 62.3

Gene sequence:

>366_bases
ATGTCTGTCAATTACGGCTCCAAGCGCATTGTTGTCGGCGCTCACTATGGCCTGCGCGACTGGCTGGCCCAGCGCGTGAC
CGCGGCCCTGATGGCCCTGTTCACCCTGCTGGTACTGGCCCAGATCCTTTTCAGCAAAGGCCCCATCGGCTACGACAAAT
GGGCCGGCATTTTCTCATCGCAGTGGATGAAGGTGCTGACCTTCACCATCATCATCGCCCTGCTCTGGCACGTGTGGGTC
GGCATGCGCGATATCTGGATGGACTACATCAAGCCGGTCGGGCTGCGCCTGGGCCTGCAGGTGTTCACCATGGTCTGGCT
GGTGGCGTGCGCCGGCTGGGGCATCCAGGTCCTGTGGCGCCTGTGA

Upstream 100 bases:

>100_bases
GGCAAGTCATCAGCCGCCGTCACGCTGGCCGTGAGCATTGGCCTCACGCTCGTGCTCGGCGCCAAGCTGTTTGGCCTTTA
CTAACTAGAGGGATCTCACC

Downstream 100 bases:

>100_bases
GGCCCGTTTAAAGCACCGCTGACCGCCCCCGACTAAAAAGATTCCCAAATAAACATGACCGCTACCTCCAAACTCCCCAA
GCGTAAATTTGACGTTGTGA

Product: succinate dehydrogenase subunit D

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MSVNYGSKRIVVGAHYGLRDWLAQRVTAALMALFTLLVLAQILFSKGPIGYDKWAGIFSSQWMKVLTFTIIIALLWHVWV
GMRDIWMDYIKPVGLRLGLQVFTMVWLVACAGWGIQVLWRL

Sequences:

>Translated_121_residues
MSVNYGSKRIVVGAHYGLRDWLAQRVTAALMALFTLLVLAQILFSKGPIGYDKWAGIFSSQWMKVLTFTIIIALLWHVWV
GMRDIWMDYIKPVGLRLGLQVFTMVWLVACAGWGIQVLWRL
>Mature_120_residues
SVNYGSKRIVVGAHYGLRDWLAQRVTAALMALFTLLVLAQILFSKGPIGYDKWAGIFSSQWMKVLTFTIIIALLWHVWVG
MRDIWMDYIKPVGLRLGLQVFTMVWLVACAGWGIQVLWRL

Specific function: Membrane-anchoring subunit of succinate dehydrogenase (SDH) [H]

COG id: COG2142

COG function: function code C; Succinate dehydrogenase, hydrophobic anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786941, Length=103, Percent_Identity=33.9805825242718, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014312
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: 1.3.99.1

Molecular weight: Translated: 13858; Mature: 13727

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVNYGSKRIVVGAHYGLRDWLAQRVTAALMALFTLLVLAQILFSKGPIGYDKWAGIFSS
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
QWMKVLTFTIIIALLWHVWVGMRDIWMDYIKPVGLRLGLQVFTMVWLVACAGWGIQVLWR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
L
C
>Mature Secondary Structure 
SVNYGSKRIVVGAHYGLRDWLAQRVTAALMALFTLLVLAQILFSKGPIGYDKWAGIFSS
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
QWMKVLTFTIIIALLWHVWVGMRDIWMDYIKPVGLRLGLQVFTMVWLVACAGWGIQVLWR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7698664; 12704232 [H]