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The map label for this gene is sdhC [H]

Identifier: 91789451

GI number: 91789451

Start: 3802462

End: 3802908

Strand: Direct

Name: sdhC [H]

Synonym: Bpro_3600

Alternate gene names: 91789451

Gene position: 3802462-3802908 (Clockwise)

Preceding gene: 91789450

Following gene: 91789452

Centisome position: 73.12

GC content: 59.51

Gene sequence:

>447_bases
ATGTCCGAATCAGCGACAACCGTAGCGAAGAAGCGGCCCGAGTTCCGCAACATCAACGCCTTTACCGACCTCCCCAGCTA
CCGCCTGCCCCTCGCCGGCCTTGTCTCCATCCTCCACCGCATCAGCGGGGCCATCATGTTTTTGCTGATGCCCTTCATCA
TCTGGATGTTCGACACCTCGATATCGTCGGAAATCTCCTTCTCCAGATTCAAGTCCGCATTCAACGCGGGCATGCTCGGC
CTGCCGGGCTTCCTCTGGAAGCTCGTCGCGCTGGCACTGATTTGGGCCTACCTGCACCATTTCATCGCAGGGCTTCGCCA
CTTGTGGATGGACACCAGCCATGCGGCCGTCAGCAAGGAATTCGGCAAGTCATCAGCCGCCGTCACGCTGGCCGTGAGCA
TTGGCCTCACGCTCGTGCTCGGCGCCAAGCTGTTTGGCCTTTACTAA

Upstream 100 bases:

>100_bases
GGCACCCGGCCCAAGATTCATGCTGCATTGCAATAGAATTTCGGGTTGAGCAGCTTTTGATGGTTACAAAGCAGTTACTC
AAAAATATAGAAAGCCAAGT

Downstream 100 bases:

>100_bases
CTAGAGGGATCTCACCATGTCTGTCAATTACGGCTCCAAGCGCATTGTTGTCGGCGCTCACTATGGCCTGCGCGACTGGC
TGGCCCAGCGCGTGACCGCG

Product: succinate dehydrogenase subunit C

Products: fumarate; reduced acceptor

Alternate protein names: Cytochrome b-556 [H]

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MSESATTVAKKRPEFRNINAFTDLPSYRLPLAGLVSILHRISGAIMFLLMPFIIWMFDTSISSEISFSRFKSAFNAGMLG
LPGFLWKLVALALIWAYLHHFIAGLRHLWMDTSHAAVSKEFGKSSAAVTLAVSIGLTLVLGAKLFGLY

Sequences:

>Translated_148_residues
MSESATTVAKKRPEFRNINAFTDLPSYRLPLAGLVSILHRISGAIMFLLMPFIIWMFDTSISSEISFSRFKSAFNAGMLG
LPGFLWKLVALALIWAYLHHFIAGLRHLWMDTSHAAVSKEFGKSSAAVTLAVSIGLTLVLGAKLFGLY
>Mature_147_residues
SESATTVAKKRPEFRNINAFTDLPSYRLPLAGLVSILHRISGAIMFLLMPFIIWMFDTSISSEISFSRFKSAFNAGMLGL
PGFLWKLVALALIWAYLHHFIAGLRHLWMDTSHAAVSKEFGKSSAAVTLAVSIGLTLVLGAKLFGLY

Specific function: Membrane-anchoring subunit of succinate dehydrogenase (SDH) [H]

COG id: COG2009

COG function: function code C; Succinate dehydrogenase/fumarate reductase, cytochrome b subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b560 family [H]

Homologues:

Organism=Escherichia coli, GI1786940, Length=136, Percent_Identity=30.1470588235294, Blast_Score=71, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018495
- InterPro:   IPR014314
- InterPro:   IPR014361
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: 1.3.99.1

Molecular weight: Translated: 16324; Mature: 16192

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESATTVAKKRPEFRNINAFTDLPSYRLPLAGLVSILHRISGAIMFLLMPFIIWMFDTS
CCCCHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ISSEISFSRFKSAFNAGMLGLPGFLWKLVALALIWAYLHHFIAGLRHLWMDTSHAAVSKE
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
FGKSSAAVTLAVSIGLTLVLGAKLFGLY
HCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SESATTVAKKRPEFRNINAFTDLPSYRLPLAGLVSILHRISGAIMFLLMPFIIWMFDTS
CCCHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ISSEISFSRFKSAFNAGMLGLPGFLWKLVALALIWAYLHHFIAGLRHLWMDTSHAAVSKE
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
FGKSSAAVTLAVSIGLTLVLGAKLFGLY
HCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]