| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789429
Identifier: 91789429
GI number: 91789429
Start: 3775576
End: 3776586
Strand: Direct
Name: 91789429
Synonym: Bpro_3575
Alternate gene names: NA
Gene position: 3775576-3776586 (Clockwise)
Preceding gene: 91789427
Following gene: 91789430
Centisome position: 72.6
GC content: 65.58
Gene sequence:
>1011_bases ATGAAAATTTCCACCCTTCCCGCCGGGGTCAGGCGCCGCGAACTGCTCATCGGCGCCGCCGCTACGGGCGTCGGGGCACT GGCACTCATGAACCCCTTGCGCGCACAGGCGCAGGCCTATCCCGACCGGCCGATCACCTTCATCTGCCCCTGGCCGGCCG GCGGCACGGCGGACCAGTCCATGCGCGCACTGTGCCAGATCGCCGCGCGCGTGCTGGGCCAGTCCATCGCGGTTGAAAAC AAGGCCGGCGCCTCCGGCATGATTGGCACCAAGGCCATGGCCTCTGCCAGGCCCGACGGCTACACCATCGGCCAGATACC GATTTCCGTCACGCGTTTCTCGCAGCTCGGCACACTGCAACTGGACCCGCTCAAGGATTTCACCTACCTGGCGCGCACCT CGGGCCAGACCTTCGGCATTGCCGCCCCGGCCGACTCGCGCTTCAAGTCGCTGCAGGAAGTCGTGGCTTTTGCCAAAGCC AACCCCGGCAAGCTGACCTATGCCCATGCGGGCATCGGCGGCGCCACGCACGTCGGCATGGAGGAGTTCGCCCTGGCGGC GGGCGTCCAGTTCAACCATGTGCCCTACAAGGGGGGTGCCGAAGCGCTGCAGGTGGTGCTCGGCGGCCATGTCGACCTGC TGGCCGACTCCAGTTCCTGGGCACCGCATGTCGAGGCCGGCAAGCTCAAGCTGCTGGCCACCTGGGGCGAACGGCGCACC GCACGCTTCAAGGATGCGCCCACGCTCAGGGAACTGGGCTACAACGTGGTGGTGGATGCGCCCAACGGCATCGGCGCCCC GAAAGGCATGGACCCGGCCATCACCCAGAAACTGCGCGAAGCGTTTCGCGTGGCCGTGGCCAGCCCCGAGTTCAAACAGG TCGCCGACAAGATCGATGCACCGGTGCTTTACCTGGACGGCCCGGACTACGAGAAGTATGTGGCCAGCGTCTACCAGAAA GAAACCGTGCTCATTGAAAAGCTCAAGCTCAGGGAATTGATGAAGAGCTGA
Upstream 100 bases:
>100_bases AATCGCTGCATAAGACGCGGCATAAGACGCGGCATAAGACGCGGCCATAAGACGCTGCATAAGAATTTCATCCGTATCCA TCCACCCGAGGCAGACAAAC
Downstream 100 bases:
>100_bases GCGCCACCCGCGTTGCCTTTCCCAACTCAGCCCACCCCTTCCAGACCTTTCCAGACCTTCCCAGTCCAGCCATGCCTTCC CCCACCGCCAGTCCGCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF7 [H]
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MKISTLPAGVRRRELLIGAAATGVGALALMNPLRAQAQAYPDRPITFICPWPAGGTADQSMRALCQIAARVLGQSIAVEN KAGASGMIGTKAMASARPDGYTIGQIPISVTRFSQLGTLQLDPLKDFTYLARTSGQTFGIAAPADSRFKSLQEVVAFAKA NPGKLTYAHAGIGGATHVGMEEFALAAGVQFNHVPYKGGAEALQVVLGGHVDLLADSSSWAPHVEAGKLKLLATWGERRT ARFKDAPTLRELGYNVVVDAPNGIGAPKGMDPAITQKLREAFRVAVASPEFKQVADKIDAPVLYLDGPDYEKYVASVYQK ETVLIEKLKLRELMKS
Sequences:
>Translated_336_residues MKISTLPAGVRRRELLIGAAATGVGALALMNPLRAQAQAYPDRPITFICPWPAGGTADQSMRALCQIAARVLGQSIAVEN KAGASGMIGTKAMASARPDGYTIGQIPISVTRFSQLGTLQLDPLKDFTYLARTSGQTFGIAAPADSRFKSLQEVVAFAKA NPGKLTYAHAGIGGATHVGMEEFALAAGVQFNHVPYKGGAEALQVVLGGHVDLLADSSSWAPHVEAGKLKLLATWGERRT ARFKDAPTLRELGYNVVVDAPNGIGAPKGMDPAITQKLREAFRVAVASPEFKQVADKIDAPVLYLDGPDYEKYVASVYQK ETVLIEKLKLRELMKS >Mature_336_residues MKISTLPAGVRRRELLIGAAATGVGALALMNPLRAQAQAYPDRPITFICPWPAGGTADQSMRALCQIAARVLGQSIAVEN KAGASGMIGTKAMASARPDGYTIGQIPISVTRFSQLGTLQLDPLKDFTYLARTSGQTFGIAAPADSRFKSLQEVVAFAKA NPGKLTYAHAGIGGATHVGMEEFALAAGVQFNHVPYKGGAEALQVVLGGHVDLLADSSSWAPHVEAGKLKLLATWGERRT ARFKDAPTLRELGYNVVVDAPNGIGAPKGMDPAITQKLREAFRVAVASPEFKQVADKIDAPVLYLDGPDYEKYVASVYQK ETVLIEKLKLRELMKS
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 - InterPro: IPR006311 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35760; Mature: 35760
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISTLPAGVRRRELLIGAAATGVGALALMNPLRAQAQAYPDRPITFICPWPAGGTADQS CCCCCCCCCCHHHHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHH MRALCQIAARVLGQSIAVENKAGASGMIGTKAMASARPDGYTIGQIPISVTRFSQLGTLQ HHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHCCCCCCEEEECCCEEEEHHHHCCCEE LDPLKDFTYLARTSGQTFGIAAPADSRFKSLQEVVAFAKANPGKLTYAHAGIGGATHVGM ECCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHCCH EEFALAAGVQFNHVPYKGGAEALQVVLGGHVDLLADSSSWAPHVEAGKLKLLATWGERRT HHHHHHCCCEECCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCC ARFKDAPTLRELGYNVVVDAPNGIGAPKGMDPAITQKLREAFRVAVASPEFKQVADKIDA CCCCCCCCHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC PVLYLDGPDYEKYVASVYQKETVLIEKLKLRELMKS CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKISTLPAGVRRRELLIGAAATGVGALALMNPLRAQAQAYPDRPITFICPWPAGGTADQS CCCCCCCCCCHHHHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHH MRALCQIAARVLGQSIAVENKAGASGMIGTKAMASARPDGYTIGQIPISVTRFSQLGTLQ HHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHCCCCCCEEEECCCEEEEHHHHCCCEE LDPLKDFTYLARTSGQTFGIAAPADSRFKSLQEVVAFAKANPGKLTYAHAGIGGATHVGM ECCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHCCH EEFALAAGVQFNHVPYKGGAEALQVVLGGHVDLLADSSSWAPHVEAGKLKLLATWGERRT HHHHHHCCCEECCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCC ARFKDAPTLRELGYNVVVDAPNGIGAPKGMDPAITQKLREAFRVAVASPEFKQVADKIDA CCCCCCCCHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC PVLYLDGPDYEKYVASVYQKETVLIEKLKLRELMKS CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7851418 [H]