Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789429

Identifier: 91789429

GI number: 91789429

Start: 3775576

End: 3776586

Strand: Direct

Name: 91789429

Synonym: Bpro_3575

Alternate gene names: NA

Gene position: 3775576-3776586 (Clockwise)

Preceding gene: 91789427

Following gene: 91789430

Centisome position: 72.6

GC content: 65.58

Gene sequence:

>1011_bases
ATGAAAATTTCCACCCTTCCCGCCGGGGTCAGGCGCCGCGAACTGCTCATCGGCGCCGCCGCTACGGGCGTCGGGGCACT
GGCACTCATGAACCCCTTGCGCGCACAGGCGCAGGCCTATCCCGACCGGCCGATCACCTTCATCTGCCCCTGGCCGGCCG
GCGGCACGGCGGACCAGTCCATGCGCGCACTGTGCCAGATCGCCGCGCGCGTGCTGGGCCAGTCCATCGCGGTTGAAAAC
AAGGCCGGCGCCTCCGGCATGATTGGCACCAAGGCCATGGCCTCTGCCAGGCCCGACGGCTACACCATCGGCCAGATACC
GATTTCCGTCACGCGTTTCTCGCAGCTCGGCACACTGCAACTGGACCCGCTCAAGGATTTCACCTACCTGGCGCGCACCT
CGGGCCAGACCTTCGGCATTGCCGCCCCGGCCGACTCGCGCTTCAAGTCGCTGCAGGAAGTCGTGGCTTTTGCCAAAGCC
AACCCCGGCAAGCTGACCTATGCCCATGCGGGCATCGGCGGCGCCACGCACGTCGGCATGGAGGAGTTCGCCCTGGCGGC
GGGCGTCCAGTTCAACCATGTGCCCTACAAGGGGGGTGCCGAAGCGCTGCAGGTGGTGCTCGGCGGCCATGTCGACCTGC
TGGCCGACTCCAGTTCCTGGGCACCGCATGTCGAGGCCGGCAAGCTCAAGCTGCTGGCCACCTGGGGCGAACGGCGCACC
GCACGCTTCAAGGATGCGCCCACGCTCAGGGAACTGGGCTACAACGTGGTGGTGGATGCGCCCAACGGCATCGGCGCCCC
GAAAGGCATGGACCCGGCCATCACCCAGAAACTGCGCGAAGCGTTTCGCGTGGCCGTGGCCAGCCCCGAGTTCAAACAGG
TCGCCGACAAGATCGATGCACCGGTGCTTTACCTGGACGGCCCGGACTACGAGAAGTATGTGGCCAGCGTCTACCAGAAA
GAAACCGTGCTCATTGAAAAGCTCAAGCTCAGGGAATTGATGAAGAGCTGA

Upstream 100 bases:

>100_bases
AATCGCTGCATAAGACGCGGCATAAGACGCGGCATAAGACGCGGCCATAAGACGCTGCATAAGAATTTCATCCGTATCCA
TCCACCCGAGGCAGACAAAC

Downstream 100 bases:

>100_bases
GCGCCACCCGCGTTGCCTTTCCCAACTCAGCCCACCCCTTCCAGACCTTTCCAGACCTTCCCAGTCCAGCCATGCCTTCC
CCCACCGCCAGTCCGCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF7 [H]

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKISTLPAGVRRRELLIGAAATGVGALALMNPLRAQAQAYPDRPITFICPWPAGGTADQSMRALCQIAARVLGQSIAVEN
KAGASGMIGTKAMASARPDGYTIGQIPISVTRFSQLGTLQLDPLKDFTYLARTSGQTFGIAAPADSRFKSLQEVVAFAKA
NPGKLTYAHAGIGGATHVGMEEFALAAGVQFNHVPYKGGAEALQVVLGGHVDLLADSSSWAPHVEAGKLKLLATWGERRT
ARFKDAPTLRELGYNVVVDAPNGIGAPKGMDPAITQKLREAFRVAVASPEFKQVADKIDAPVLYLDGPDYEKYVASVYQK
ETVLIEKLKLRELMKS

Sequences:

>Translated_336_residues
MKISTLPAGVRRRELLIGAAATGVGALALMNPLRAQAQAYPDRPITFICPWPAGGTADQSMRALCQIAARVLGQSIAVEN
KAGASGMIGTKAMASARPDGYTIGQIPISVTRFSQLGTLQLDPLKDFTYLARTSGQTFGIAAPADSRFKSLQEVVAFAKA
NPGKLTYAHAGIGGATHVGMEEFALAAGVQFNHVPYKGGAEALQVVLGGHVDLLADSSSWAPHVEAGKLKLLATWGERRT
ARFKDAPTLRELGYNVVVDAPNGIGAPKGMDPAITQKLREAFRVAVASPEFKQVADKIDAPVLYLDGPDYEKYVASVYQK
ETVLIEKLKLRELMKS
>Mature_336_residues
MKISTLPAGVRRRELLIGAAATGVGALALMNPLRAQAQAYPDRPITFICPWPAGGTADQSMRALCQIAARVLGQSIAVEN
KAGASGMIGTKAMASARPDGYTIGQIPISVTRFSQLGTLQLDPLKDFTYLARTSGQTFGIAAPADSRFKSLQEVVAFAKA
NPGKLTYAHAGIGGATHVGMEEFALAAGVQFNHVPYKGGAEALQVVLGGHVDLLADSSSWAPHVEAGKLKLLATWGERRT
ARFKDAPTLRELGYNVVVDAPNGIGAPKGMDPAITQKLREAFRVAVASPEFKQVADKIDAPVLYLDGPDYEKYVASVYQK
ETVLIEKLKLRELMKS

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064
- InterPro:   IPR006311 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 35760; Mature: 35760

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISTLPAGVRRRELLIGAAATGVGALALMNPLRAQAQAYPDRPITFICPWPAGGTADQS
CCCCCCCCCCHHHHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHH
MRALCQIAARVLGQSIAVENKAGASGMIGTKAMASARPDGYTIGQIPISVTRFSQLGTLQ
HHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHCCCCCCEEEECCCEEEEHHHHCCCEE
LDPLKDFTYLARTSGQTFGIAAPADSRFKSLQEVVAFAKANPGKLTYAHAGIGGATHVGM
ECCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHCCH
EEFALAAGVQFNHVPYKGGAEALQVVLGGHVDLLADSSSWAPHVEAGKLKLLATWGERRT
HHHHHHCCCEECCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCC
ARFKDAPTLRELGYNVVVDAPNGIGAPKGMDPAITQKLREAFRVAVASPEFKQVADKIDA
CCCCCCCCHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PVLYLDGPDYEKYVASVYQKETVLIEKLKLRELMKS
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKISTLPAGVRRRELLIGAAATGVGALALMNPLRAQAQAYPDRPITFICPWPAGGTADQS
CCCCCCCCCCHHHHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHH
MRALCQIAARVLGQSIAVENKAGASGMIGTKAMASARPDGYTIGQIPISVTRFSQLGTLQ
HHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHCCCCCCEEEECCCEEEEHHHHCCCEE
LDPLKDFTYLARTSGQTFGIAAPADSRFKSLQEVVAFAKANPGKLTYAHAGIGGATHVGM
ECCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHCCH
EEFALAAGVQFNHVPYKGGAEALQVVLGGHVDLLADSSSWAPHVEAGKLKLLATWGERRT
HHHHHHCCCEECCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCC
ARFKDAPTLRELGYNVVVDAPNGIGAPKGMDPAITQKLREAFRVAVASPEFKQVADKIDA
CCCCCCCCHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PVLYLDGPDYEKYVASVYQKETVLIEKLKLRELMKS
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7851418 [H]