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The map label for this gene is sodC2 [H]

Identifier: 91789408

GI number: 91789408

Start: 3754230

End: 3754745

Strand: Direct

Name: sodC2 [H]

Synonym: Bpro_3554

Alternate gene names: 91789408

Gene position: 3754230-3754745 (Clockwise)

Preceding gene: 91789407

Following gene: 91789413

Centisome position: 72.19

GC content: 64.34

Gene sequence:

>516_bases
ATGAAATCCCGTTTGACACTGCTTGCCAGCGCCCTTGTTCTGACAGCCTGCGCCTCCATGACCAGCGGCCCGCGCGCCGT
GGCCCAGCTCCAAAGTACCACGGGCAACACCGCCACCGGCACCGTCAGCTTTACCAAGAGCGGGGACAAGGTGGTCGTGA
AGGGTGAAGTGCGCGGCCTCAAGCCCAACGCCGAGCACGGCTTTCACGTGCATGAAAAAGGCGACTGCTCCAGTGGCGAC
GGCTTGAGCGCGGGCGGCCATTTCAACCCCGATGGCAAGCCCCATGGAAATCATTCCGACATGGCTCACCATGCCGGCGA
TTTGCCCAGCCTGAAAGCCGATGCCAGCGGCGTCGCGAAATTCAGCTTTGAAACCACCTCCATCGCCGTCGGCAGCGGCC
CCAGCGACGTGACGGGCCGCGGGCTGATTGTTCACCGTGACCCGGACGATTACAAGACCCAACCCACCGGCAACGCCGGC
CCACGGCTGGCTTGCGCTGTGATCGCGCGGGGCTGA

Upstream 100 bases:

>100_bases
AGTGAGCGAACGTGGGGGCCATATTGCCATCCCGGACATTGCCGCTTAAAGTAGGCCCCTGACCTTTCCCCTGACCAACA
ACGAACAACAGGAAAACACC

Downstream 100 bases:

>100_bases
GCTCTTCGGACTGCTTCAGCGCTGGCCGAGCAGCATTTCGGCCCGGCGCAAGTCTTCCAGCGTATCGATGTCGGTGACCG
TGCCGGGGTCAGTGACGTCG

Product: superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKSRLTLLASALVLTACASMTSGPRAVAQLQSTTGNTATGTVSFTKSGDKVVVKGEVRGLKPNAEHGFHVHEKGDCSSGD
GLSAGGHFNPDGKPHGNHSDMAHHAGDLPSLKADASGVAKFSFETTSIAVGSGPSDVTGRGLIVHRDPDDYKTQPTGNAG
PRLACAVIARG

Sequences:

>Translated_171_residues
MKSRLTLLASALVLTACASMTSGPRAVAQLQSTTGNTATGTVSFTKSGDKVVVKGEVRGLKPNAEHGFHVHEKGDCSSGD
GLSAGGHFNPDGKPHGNHSDMAHHAGDLPSLKADASGVAKFSFETTSIAVGSGPSDVTGRGLIVHRDPDDYKTQPTGNAG
PRLACAVIARG
>Mature_171_residues
MKSRLTLLASALVLTACASMTSGPRAVAQLQSTTGNTATGTVSFTKSGDKVVVKGEVRGLKPNAEHGFHVHEKGDCSSGD
GLSAGGHFNPDGKPHGNHSDMAHHAGDLPSLKADASGVAKFSFETTSIAVGSGPSDVTGRGLIVHRDPDDYKTQPTGNAG
PRLACAVIARG

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cu-Zn superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI4826665, Length=141, Percent_Identity=40.4255319148936, Blast_Score=96, Evalue=1e-20,
Organism=Homo sapiens, GI4507149, Length=137, Percent_Identity=43.7956204379562, Blast_Score=90, Evalue=1e-18,
Organism=Escherichia coli, GI1787934, Length=174, Percent_Identity=29.8850574712644, Blast_Score=63, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71981876, Length=176, Percent_Identity=41.4772727272727, Blast_Score=114, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71981879, Length=156, Percent_Identity=44.2307692307692, Blast_Score=110, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17554806, Length=177, Percent_Identity=38.4180790960452, Blast_Score=100, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17537871, Length=176, Percent_Identity=37.5, Blast_Score=91, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6322564, Length=152, Percent_Identity=42.7631578947368, Blast_Score=103, Evalue=1e-23,
Organism=Drosophila melanogaster, GI85725006, Length=179, Percent_Identity=34.0782122905028, Blast_Score=96, Evalue=1e-20,
Organism=Drosophila melanogaster, GI45551081, Length=179, Percent_Identity=34.0782122905028, Blast_Score=96, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24652737, Length=179, Percent_Identity=34.0782122905028, Blast_Score=96, Evalue=1e-20,
Organism=Drosophila melanogaster, GI116007680, Length=180, Percent_Identity=34.4444444444444, Blast_Score=96, Evalue=1e-20,
Organism=Drosophila melanogaster, GI17136496, Length=139, Percent_Identity=42.4460431654676, Blast_Score=84, Evalue=4e-17,
Organism=Drosophila melanogaster, GI281363087, Length=113, Percent_Identity=38.9380530973451, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24652342, Length=113, Percent_Identity=38.9380530973451, Blast_Score=75, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018152
- InterPro:   IPR001424 [H]

Pfam domain/function: PF00080 Sod_Cu [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 17386; Mature: 17386

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00087 SOD_CU_ZN_1 ; PS00332 SOD_CU_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRLTLLASALVLTACASMTSGPRAVAQLQSTTGNTATGTVSFTKSGDKVVVKGEVRGL
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEECCCC
KPNAEHGFHVHEKGDCSSGDGLSAGGHFNPDGKPHGNHSDMAHHAGDLPSLKADASGVAK
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEE
FSFETTSIAVGSGPSDVTGRGLIVHRDPDDYKTQPTGNAGPRLACAVIARG
EEECCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKSRLTLLASALVLTACASMTSGPRAVAQLQSTTGNTATGTVSFTKSGDKVVVKGEVRGL
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEECCCC
KPNAEHGFHVHEKGDCSSGDGLSAGGHFNPDGKPHGNHSDMAHHAGDLPSLKADASGVAK
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEE
FSFETTSIAVGSGPSDVTGRGLIVHRDPDDYKTQPTGNAGPRLACAVIARG
EEECCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]