Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is chaC [H]

Identifier: 91789407

GI number: 91789407

Start: 3753353

End: 3753901

Strand: Direct

Name: chaC [H]

Synonym: Bpro_3553

Alternate gene names: 91789407

Gene position: 3753353-3753901 (Clockwise)

Preceding gene: 91789403

Following gene: 91789408

Centisome position: 72.18

GC content: 63.21

Gene sequence:

>549_bases
ATGCTGGAAACCGTGATACGCGAATGGGGTGGCCACACCGACCTCTGGATCTTTGCCTACGCGTCGCTGATCTGGCGGCC
CGAATTCGAATTTTCGGAAGAGCGTTTTGCCACCATCCATGGCTACCACCGGGCGCTAAAAATGTGGAGCAACCTGAACC
GCGGCACACCCGAGTGCCCGGGCCTGGTATTTGGGCTGCTGCACGGTGGCAGCTGCAAGGGCGTGGCGTTTCGCATCCCG
CGGGCGGGCGTGGCCGCAGCCCTGCCCGCCCTGTGGGAGAGGGAAATGCCCAATGGCGTCTACGACCCGAAATGGTTGCG
TTGCCAGACCGCACTGGGCGACGTGCGGGCCCTGGCCTTCACGCTGTCCAAGCGCAGCCCCAGCCACACCGGCGTGCTCC
ACGAAGACACCTACCGGCAAATTTTTTCAGACTCCTGCGGGCGCTACGGCACAACCCGCGACTACGCCCAATTGACGTAC
GACAAACTGCGCACCCTGGGCATTCACGACCACGCCCTCGGAAAACTGTTGCAGCTGGCCTGCAGCTGA

Upstream 100 bases:

>100_bases
CCGTCGCAAAAACTCGGACCATTGTAAAGTGTGGGTCGTGGCAGACTCCGCAAAATCAATCAGCTTTCCGCCCCCTTCCC
CCTCACGCAATCCGGCTCAC

Downstream 100 bases:

>100_bases
AAACCCGGTGGGCCGGCCCAGGGGGGGGAATGCGCCCTCTCGGGAGCAGCGCAGTACACGAAGCGACAACCAGGGGGCTA
ACGAGCGCAGCGAAGGGCCG

Product: ChaC-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MLETVIREWGGHTDLWIFAYASLIWRPEFEFSEERFATIHGYHRALKMWSNLNRGTPECPGLVFGLLHGGSCKGVAFRIP
RAGVAAALPALWEREMPNGVYDPKWLRCQTALGDVRALAFTLSKRSPSHTGVLHEDTYRQIFSDSCGRYGTTRDYAQLTY
DKLRTLGIHDHALGKLLQLACS

Sequences:

>Translated_182_residues
MLETVIREWGGHTDLWIFAYASLIWRPEFEFSEERFATIHGYHRALKMWSNLNRGTPECPGLVFGLLHGGSCKGVAFRIP
RAGVAAALPALWEREMPNGVYDPKWLRCQTALGDVRALAFTLSKRSPSHTGVLHEDTYRQIFSDSCGRYGTTRDYAQLTY
DKLRTLGIHDHALGKLLQLACS
>Mature_182_residues
MLETVIREWGGHTDLWIFAYASLIWRPEFEFSEERFATIHGYHRALKMWSNLNRGTPECPGLVFGLLHGGSCKGVAFRIP
RAGVAAALPALWEREMPNGVYDPKWLRCQTALGDVRALAFTLSKRSPSHTGVLHEDTYRQIFSDSCGRYGTTRDYAQLTY
DKLRTLGIHDHALGKLLQLACS

Specific function: Unknown

COG id: COG3703

COG function: function code P; Uncharacterized protein involved in cation transport

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chaC family [H]

Homologues:

Organism=Homo sapiens, GI218563698, Length=135, Percent_Identity=35.5555555555556, Blast_Score=71, Evalue=4e-13,
Organism=Escherichia coli, GI145693119, Length=166, Percent_Identity=35.5421686746988, Blast_Score=104, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013024
- InterPro:   IPR006840 [H]

Pfam domain/function: PF04752 ChaC [H]

EC number: NA

Molecular weight: Translated: 20584; Mature: 20584

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLETVIREWGGHTDLWIFAYASLIWRPEFEFSEERFATIHGYHRALKMWSNLNRGTPECP
CHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GLVFGLLHGGSCKGVAFRIPRAGVAAALPALWEREMPNGVYDPKWLRCQTALGDVRALAF
HHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
TLSKRSPSHTGVLHEDTYRQIFSDSCGRYGTTRDYAQLTYDKLRTLGIHDHALGKLLQLA
HHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
CS
CC
>Mature Secondary Structure
MLETVIREWGGHTDLWIFAYASLIWRPEFEFSEERFATIHGYHRALKMWSNLNRGTPECP
CHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GLVFGLLHGGSCKGVAFRIPRAGVAAALPALWEREMPNGVYDPKWLRCQTALGDVRALAF
HHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
TLSKRSPSHTGVLHEDTYRQIFSDSCGRYGTTRDYAQLTYDKLRTLGIHDHALGKLLQLA
HHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
CS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]