| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is chaC [H]
Identifier: 91789407
GI number: 91789407
Start: 3753353
End: 3753901
Strand: Direct
Name: chaC [H]
Synonym: Bpro_3553
Alternate gene names: 91789407
Gene position: 3753353-3753901 (Clockwise)
Preceding gene: 91789403
Following gene: 91789408
Centisome position: 72.18
GC content: 63.21
Gene sequence:
>549_bases ATGCTGGAAACCGTGATACGCGAATGGGGTGGCCACACCGACCTCTGGATCTTTGCCTACGCGTCGCTGATCTGGCGGCC CGAATTCGAATTTTCGGAAGAGCGTTTTGCCACCATCCATGGCTACCACCGGGCGCTAAAAATGTGGAGCAACCTGAACC GCGGCACACCCGAGTGCCCGGGCCTGGTATTTGGGCTGCTGCACGGTGGCAGCTGCAAGGGCGTGGCGTTTCGCATCCCG CGGGCGGGCGTGGCCGCAGCCCTGCCCGCCCTGTGGGAGAGGGAAATGCCCAATGGCGTCTACGACCCGAAATGGTTGCG TTGCCAGACCGCACTGGGCGACGTGCGGGCCCTGGCCTTCACGCTGTCCAAGCGCAGCCCCAGCCACACCGGCGTGCTCC ACGAAGACACCTACCGGCAAATTTTTTCAGACTCCTGCGGGCGCTACGGCACAACCCGCGACTACGCCCAATTGACGTAC GACAAACTGCGCACCCTGGGCATTCACGACCACGCCCTCGGAAAACTGTTGCAGCTGGCCTGCAGCTGA
Upstream 100 bases:
>100_bases CCGTCGCAAAAACTCGGACCATTGTAAAGTGTGGGTCGTGGCAGACTCCGCAAAATCAATCAGCTTTCCGCCCCCTTCCC CCTCACGCAATCCGGCTCAC
Downstream 100 bases:
>100_bases AAACCCGGTGGGCCGGCCCAGGGGGGGGAATGCGCCCTCTCGGGAGCAGCGCAGTACACGAAGCGACAACCAGGGGGCTA ACGAGCGCAGCGAAGGGCCG
Product: ChaC-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MLETVIREWGGHTDLWIFAYASLIWRPEFEFSEERFATIHGYHRALKMWSNLNRGTPECPGLVFGLLHGGSCKGVAFRIP RAGVAAALPALWEREMPNGVYDPKWLRCQTALGDVRALAFTLSKRSPSHTGVLHEDTYRQIFSDSCGRYGTTRDYAQLTY DKLRTLGIHDHALGKLLQLACS
Sequences:
>Translated_182_residues MLETVIREWGGHTDLWIFAYASLIWRPEFEFSEERFATIHGYHRALKMWSNLNRGTPECPGLVFGLLHGGSCKGVAFRIP RAGVAAALPALWEREMPNGVYDPKWLRCQTALGDVRALAFTLSKRSPSHTGVLHEDTYRQIFSDSCGRYGTTRDYAQLTY DKLRTLGIHDHALGKLLQLACS >Mature_182_residues MLETVIREWGGHTDLWIFAYASLIWRPEFEFSEERFATIHGYHRALKMWSNLNRGTPECPGLVFGLLHGGSCKGVAFRIP RAGVAAALPALWEREMPNGVYDPKWLRCQTALGDVRALAFTLSKRSPSHTGVLHEDTYRQIFSDSCGRYGTTRDYAQLTY DKLRTLGIHDHALGKLLQLACS
Specific function: Unknown
COG id: COG3703
COG function: function code P; Uncharacterized protein involved in cation transport
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chaC family [H]
Homologues:
Organism=Homo sapiens, GI218563698, Length=135, Percent_Identity=35.5555555555556, Blast_Score=71, Evalue=4e-13, Organism=Escherichia coli, GI145693119, Length=166, Percent_Identity=35.5421686746988, Blast_Score=104, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013024 - InterPro: IPR006840 [H]
Pfam domain/function: PF04752 ChaC [H]
EC number: NA
Molecular weight: Translated: 20584; Mature: 20584
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLETVIREWGGHTDLWIFAYASLIWRPEFEFSEERFATIHGYHRALKMWSNLNRGTPECP CHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC GLVFGLLHGGSCKGVAFRIPRAGVAAALPALWEREMPNGVYDPKWLRCQTALGDVRALAF HHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH TLSKRSPSHTGVLHEDTYRQIFSDSCGRYGTTRDYAQLTYDKLRTLGIHDHALGKLLQLA HHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH CS CC >Mature Secondary Structure MLETVIREWGGHTDLWIFAYASLIWRPEFEFSEERFATIHGYHRALKMWSNLNRGTPECP CHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC GLVFGLLHGGSCKGVAFRIPRAGVAAALPALWEREMPNGVYDPKWLRCQTALGDVRALAF HHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH TLSKRSPSHTGVLHEDTYRQIFSDSCGRYGTTRDYAQLTYDKLRTLGIHDHALGKLLQLA HHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH CS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]