Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789393

Identifier: 91789393

GI number: 91789393

Start: 3740218

End: 3740658

Strand: Reverse

Name: 91789393

Synonym: Bpro_3539

Alternate gene names: NA

Gene position: 3740658-3740218 (Counterclockwise)

Preceding gene: 91789395

Following gene: 91789392

Centisome position: 71.93

GC content: 57.14

Gene sequence:

>441_bases
ATGAAAGACGTTGCACAAATCCTCAAGTCGAAGGCAGATCACAAGGTCTACACCGTTTCACCGTTGGCGCCGGTGCTGGA
TGCCGTCAAGTTGATGGCGGAGAAGAACCTCGGTGCGCTCCTGGTGTTGGACGGCGAAGAGTTCGTGGGCATCATCAGCG
AACGCGATTGCACGCGGAAAATGCTCCTGGCGGACCGCTTGCCCAGGGAAACGCCGGTGCGCGACATCATGAGTTCACCG
GTGCAGTACGTGGGCCCCCGCCATACCAACGAGGAATGCATGGCGCTGATGACAGACAAGCGCCTTCGCCACTTACCCGT
CATAGACAACGGCAAGCTCATCGGCCTGGTTTCCATCGGTGATCTGGTCAAGGACATCATTTCCGAGCAGGGTTTCATCA
TCCAGCAGCTCGAACACTACATTGCGGGCGTAAAAGGCTGA

Upstream 100 bases:

>100_bases
ACTGGGTCACCGTGGCGGATGCGCTGCGGGTGATCGGCGTGAGCGCTTTGTTCGGGTCGGGAAGCAGCTCATCCGCACTG
CAGACCACGAAGGAATAACC

Downstream 100 bases:

>100_bases
CGGATCATCCGGCGACGGGCGAGTAGTGCTCCGGGCCCCAGGGCCTGCCTTTTCAGGACCCGGGCAATCGGGATCGCGCA
ATGGGGCCGTCCGCATGAAC

Product: signal-transduction protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MKDVAQILKSKADHKVYTVSPLAPVLDAVKLMAEKNLGALLVLDGEEFVGIISERDCTRKMLLADRLPRETPVRDIMSSP
VQYVGPRHTNEECMALMTDKRLRHLPVIDNGKLIGLVSIGDLVKDIISEQGFIIQQLEHYIAGVKG

Sequences:

>Translated_146_residues
MKDVAQILKSKADHKVYTVSPLAPVLDAVKLMAEKNLGALLVLDGEEFVGIISERDCTRKMLLADRLPRETPVRDIMSSP
VQYVGPRHTNEECMALMTDKRLRHLPVIDNGKLIGLVSIGDLVKDIISEQGFIIQQLEHYIAGVKG
>Mature_146_residues
MKDVAQILKSKADHKVYTVSPLAPVLDAVKLMAEKNLGALLVLDGEEFVGIISERDCTRKMLLADRLPRETPVRDIMSSP
VQYVGPRHTNEECMALMTDKRLRHLPVIDNGKLIGLVSIGDLVKDIISEQGFIIQQLEHYIAGVKG

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 16202; Mature: 16202

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDVAQILKSKADHKVYTVSPLAPVLDAVKLMAEKNLGALLVLDGEEFVGIISERDCTRK
CHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCHHHHH
MLLADRLPRETPVRDIMSSPVQYVGPRHTNEECMALMTDKRLRHLPVIDNGKLIGLVSIG
HHHHHHCCCCCCHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEHHH
DLVKDIISEQGFIIQQLEHYIAGVKG
HHHHHHHHCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKDVAQILKSKADHKVYTVSPLAPVLDAVKLMAEKNLGALLVLDGEEFVGIISERDCTRK
CHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCHHHHH
MLLADRLPRETPVRDIMSSPVQYVGPRHTNEECMALMTDKRLRHLPVIDNGKLIGLVSIG
HHHHHHCCCCCCHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEHHH
DLVKDIISEQGFIIQQLEHYIAGVKG
HHHHHHHHCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA