Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is copA [H]

Identifier: 91789350

GI number: 91789350

Start: 3696966

End: 3697241

Strand: Reverse

Name: copA [H]

Synonym: Bpro_3496

Alternate gene names: 91789350

Gene position: 3697241-3696966 (Counterclockwise)

Preceding gene: 91789368

Following gene: 91789349

Centisome position: 71.1

GC content: 62.68

Gene sequence:

>276_bases
ATGAGCAGCACCGCCACCCTCGCGCCCACCGCAATCGGTGGCTTGGCGGTCCGGTCGTTTCCGATCGAGGGCATGACCTG
TGCATCTTGCGTGTTTAACGAACACTGGGCGCTCAACGATCTGTTCTGGGCGTTCTCCTATAACGTGGTGGCGACTCCCT
TGGTGGCACTGGGGCTGCTGAGCCCGGTCGTTGCCGGCGCGGCCATGGCGTTCAGCAGCGTCAGCGTGGTTGCCAATGCC
TTGACGCTGCGCCACTGGAAAGGAGATCGACCATGA

Upstream 100 bases:

>100_bases
CGACACTGAATTGGAAGCGGCACCCTTGACTTTCCAACAGTGGCAAGGTCGAGACTGAGTCAACGGCCGCGAAAGCGGCT
TTAGCCTACCCAGGAATCCC

Downstream 100 bases:

>100_bases
TGTACAACACCGCACCACGGCAAGAACGGGCCGCCAGCAAGCCGGCAGGATACGGTCGTCACCGAACGCCGGCGCCGATG
AACGCGCAGCGGTTCAACAT

Product: cation transport ATPase-like protein

Products: ADP; Orthophosphate. [C]

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MSSTATLAPTAIGGLAVRSFPIEGMTCASCVFNEHWALNDLFWAFSYNVVATPLVALGLLSPVVAGAAMAFSSVSVVANA
LTLRHWKGDRP

Sequences:

>Translated_91_residues
MSSTATLAPTAIGGLAVRSFPIEGMTCASCVFNEHWALNDLFWAFSYNVVATPLVALGLLSPVVAGAAMAFSSVSVVANA
LTLRHWKGDRP
>Mature_90_residues
SSTATLAPTAIGGLAVRSFPIEGMTCASCVFNEHWALNDLFWAFSYNVVATPLVALGLLSPVVAGAAMAFSSVSVVANAL
TLRHWKGDRP

Specific function: Involved in copper export [H]

COG id: COG2217

COG function: function code P; Cation transport ATPase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HMA domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008250
- InterPro:   IPR006403
- InterPro:   IPR001366
- InterPro:   IPR006416
- InterPro:   IPR001757
- InterPro:   IPR018303
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR017969
- InterPro:   IPR006121
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]

EC number: 3.6.3.4 [C]

Molecular weight: Translated: 9525; Mature: 9394

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTATLAPTAIGGLAVRSFPIEGMTCASCVFNEHWALNDLFWAFSYNVVATPLVALGLL
CCCCCCCCCHHHCCHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHH
SPVVAGAAMAFSSVSVVANALTLRHWKGDRP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SSTATLAPTAIGGLAVRSFPIEGMTCASCVFNEHWALNDLFWAFSYNVVATPLVALGLL
CCCCCCCCHHHCCHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHH
SPVVAGAAMAFSSVSVVANALTLRHWKGDRP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O [C]

Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA