Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789338

Identifier: 91789338

GI number: 91789338

Start: 3684259

End: 3685677

Strand: Direct

Name: 91789338

Synonym: Bpro_3484

Alternate gene names: NA

Gene position: 3684259-3685677 (Clockwise)

Preceding gene: 91789337

Following gene: 91789339

Centisome position: 70.85

GC content: 64.2

Gene sequence:

>1419_bases
ATGAAAACGATTTTTCGATTGAGCGCCCTGGCCACGGCAGGCCTTGTGCTGGCAGGCTGCGCATCGGTCAACGTTGACCA
GGTCGTGCGTGACACCAATGACACAACCAACACCTTTACCCAAGGCAAGCTGGAGCTCAGCCGTACCGAGCAGCAGGGGC
AAGCCAGAGCCAAGCTGAGCAGTGAACTGCTGGCCAAGCCTTTAACGATGGACGATGCCGTACAGCTGGCTTTGTCCAAC
AGCCCGGCCGTGCAGACCTTGTTGGCGCAAAGCTGGGCCGACATGGCCCAGGCCAACCAGGCGGGCCGGATTGCCAACCC
GCTCTTCACGTTTGAACGGATGCGCTTTGGCGATGAGCTTGAGCTGGGTCGTCTGCTGTCATTTGGCCTGCTGGATATCC
TGACGCTGCCGCGGCGGCAGGCCATTTCGCGCAGCCAGGGCAGGCAGGCCAAGGTGCAGCTCAGTGCCAATGTGGTCGAG
CAGGTCACGCAGGTACGCCAGGCCTGGGTGCGAGCCGTGGCCGCGCAGCAGACGCTGCAATACGCAGGCCAGGTCAACAG
CACCGCGCAGGCGAGTGCAGAACTTGCCCGGCGCATGCAGCAGGTGGGCAACTTCACCAAGCTGCAGCGGGCGCGCCAGC
AGGTGTTCTATGCGGACGCTACCGCACAGCTGGCGTCAAGCCAGCATGCGGCCACCGCCGCCCGCGAAGAGCTGACGCGC
CAGCTGGGCCTGACCGACGCGCAAGCCGGGCAATTAAAGCTGCCTGAACGCCTTCCCGACCTGCCGAAAGAACCGCGCCA
GGCAGCCGTGGTGAGCGCCAACGCCACGCAGCAGCGCCTGGACGTGCAAATGGCACGTAACCAGCTCGACGTGGCGGGGC
AATCCCAAGGCTTGAACTTGATCACCAGCCTTGTTGACGTGGAGCTGGGCATTCGCCGCGACACGGTGTTTGACAACGCG
GCCGGCACGAGCACGCCACGCAGAGGTTACGAGCTGGGCATTCGCCTGCCAATCTTTGATTGGGGCTCCGCGCAGCGTGC
CGCGATGAACGCGCAGTCGCTGGCCGCCGCCAACCGCTATGAAAGCACGGTGCGCAACGCCTCGTCACAGCTGCGGGAGA
GTTATTCGGCTTACCGCACAGCCTATGACGTGGCCCGGCATTACCGCGACGAGATTGTGCCGCTGCGCAAGACCATGGCC
GACGAAAACGTACTGCGCTACAACGGCATGCTGATAGGCGTGTTCGAGCTGCTGGCCGACAACCGCGAGCAGATCTCCAG
CGTCATCGCCGCGATCAACGCCTATCAGCAGTTCTGGCTCGCCGATGCTGCGCTTGCCGCGTCCATGACCGGCAAGCCAA
CCGCCACGCTGATGGCAGCGCCCACGTCAGGTGGCGGCGGCGACGGGGCCGGTCACTGA

Upstream 100 bases:

>100_bases
AGGCCAGTCAGCCCGAGTCCGGGGCCAGGCCGCCAGCGGCTGATGTCGCGACCAAGCCCGGCCCTGGCGCAGTGCCTGCC
AAACCGTGACAGGAAACGCC

Downstream 100 bases:

>100_bases
TGACCCGCCGCACAGACCAATCAATGGAATCGACATGACAAACAGAAGAAATTTTTTGACCGGCGCGGGCGCACTGACCT
CCGCCGTGGCCGCAGCAGCA

Product: putative copper resistance-like protein lipoprotein

Products: NA

Alternate protein names: Copper lerance Protein; Copper Resistance-Related Lipoprotein; Outer Membrane Efflux Protein Involved In Copper Resistance; Metal Ion Efflux Outer Membrane Protein; Outer Membrane Protein; Copper Resistance-Related Protein; TypeIsecretion System Outer Membrane Chanel Lipoprotein; Copper Resistance Protein; Outer Membrane Protein-Like Protein; Efflux Protein; Outer Membrane Efflux Protein Involved

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MKTIFRLSALATAGLVLAGCASVNVDQVVRDTNDTTNTFTQGKLELSRTEQQGQARAKLSSELLAKPLTMDDAVQLALSN
SPAVQTLLAQSWADMAQANQAGRIANPLFTFERMRFGDELELGRLLSFGLLDILTLPRRQAISRSQGRQAKVQLSANVVE
QVTQVRQAWVRAVAAQQTLQYAGQVNSTAQASAELARRMQQVGNFTKLQRARQQVFYADATAQLASSQHAATAAREELTR
QLGLTDAQAGQLKLPERLPDLPKEPRQAAVVSANATQQRLDVQMARNQLDVAGQSQGLNLITSLVDVELGIRRDTVFDNA
AGTSTPRRGYELGIRLPIFDWGSAQRAAMNAQSLAAANRYESTVRNASSQLRESYSAYRTAYDVARHYRDEIVPLRKTMA
DENVLRYNGMLIGVFELLADNREQISSVIAAINAYQQFWLADAALAASMTGKPTATLMAAPTSGGGGDGAGH

Sequences:

>Translated_472_residues
MKTIFRLSALATAGLVLAGCASVNVDQVVRDTNDTTNTFTQGKLELSRTEQQGQARAKLSSELLAKPLTMDDAVQLALSN
SPAVQTLLAQSWADMAQANQAGRIANPLFTFERMRFGDELELGRLLSFGLLDILTLPRRQAISRSQGRQAKVQLSANVVE
QVTQVRQAWVRAVAAQQTLQYAGQVNSTAQASAELARRMQQVGNFTKLQRARQQVFYADATAQLASSQHAATAAREELTR
QLGLTDAQAGQLKLPERLPDLPKEPRQAAVVSANATQQRLDVQMARNQLDVAGQSQGLNLITSLVDVELGIRRDTVFDNA
AGTSTPRRGYELGIRLPIFDWGSAQRAAMNAQSLAAANRYESTVRNASSQLRESYSAYRTAYDVARHYRDEIVPLRKTMA
DENVLRYNGMLIGVFELLADNREQISSVIAAINAYQQFWLADAALAASMTGKPTATLMAAPTSGGGGDGAGH
>Mature_472_residues
MKTIFRLSALATAGLVLAGCASVNVDQVVRDTNDTTNTFTQGKLELSRTEQQGQARAKLSSELLAKPLTMDDAVQLALSN
SPAVQTLLAQSWADMAQANQAGRIANPLFTFERMRFGDELELGRLLSFGLLDILTLPRRQAISRSQGRQAKVQLSANVVE
QVTQVRQAWVRAVAAQQTLQYAGQVNSTAQASAELARRMQQVGNFTKLQRARQQVFYADATAQLASSQHAATAAREELTR
QLGLTDAQAGQLKLPERLPDLPKEPRQAAVVSANATQQRLDVQMARNQLDVAGQSQGLNLITSLVDVELGIRRDTVFDNA
AGTSTPRRGYELGIRLPIFDWGSAQRAAMNAQSLAAANRYESTVRNASSQLRESYSAYRTAYDVARHYRDEIVPLRKTMA
DENVLRYNGMLIGVFELLADNREQISSVIAAINAYQQFWLADAALAASMTGKPTATLMAAPTSGGGGDGAGH

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51252; Mature: 51252

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIFRLSALATAGLVLAGCASVNVDQVVRDTNDTTNTFTQGKLELSRTEQQGQARAKLS
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
SELLAKPLTMDDAVQLALSNSPAVQTLLAQSWADMAQANQAGRIANPLFTFERMRFGDEL
HHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCH
ELGRLLSFGLLDILTLPRRQAISRSQGRQAKVQLSANVVEQVTQVRQAWVRAVAAQQTLQ
HHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAGQVNSTAQASAELARRMQQVGNFTKLQRARQQVFYADATAQLASSQHAATAAREELTR
HHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGLTDAQAGQLKLPERLPDLPKEPRQAAVVSANATQQRLDVQMARNQLDVAGQSQGLNL
HHCCCCCCCCCCCCHHHCCCCCCCCCHHEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHH
ITSLVDVELGIRRDTVFDNAAGTSTPRRGYELGIRLPIFDWGSAQRAAMNAQSLAAANRY
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHH
ESTVRNASSQLRESYSAYRTAYDVARHYRDEIVPLRKTMADENVLRYNGMLIGVFELLAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCC
NREQISSVIAAINAYQQFWLADAALAASMTGKPTATLMAAPTSGGGGDGAGH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKTIFRLSALATAGLVLAGCASVNVDQVVRDTNDTTNTFTQGKLELSRTEQQGQARAKLS
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
SELLAKPLTMDDAVQLALSNSPAVQTLLAQSWADMAQANQAGRIANPLFTFERMRFGDEL
HHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCH
ELGRLLSFGLLDILTLPRRQAISRSQGRQAKVQLSANVVEQVTQVRQAWVRAVAAQQTLQ
HHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAGQVNSTAQASAELARRMQQVGNFTKLQRARQQVFYADATAQLASSQHAATAAREELTR
HHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGLTDAQAGQLKLPERLPDLPKEPRQAAVVSANATQQRLDVQMARNQLDVAGQSQGLNL
HHCCCCCCCCCCCCHHHCCCCCCCCCHHEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHH
ITSLVDVELGIRRDTVFDNAAGTSTPRRGYELGIRLPIFDWGSAQRAAMNAQSLAAANRY
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHH
ESTVRNASSQLRESYSAYRTAYDVARHYRDEIVPLRKTMADENVLRYNGMLIGVFELLAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCC
NREQISSVIAAINAYQQFWLADAALAASMTGKPTATLMAAPTSGGGGDGAGH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA