Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91789332

Identifier: 91789332

GI number: 91789332

Start: 3680334

End: 3680612

Strand: Direct

Name: 91789332

Synonym: Bpro_3478

Alternate gene names: NA

Gene position: 3680334-3680612 (Clockwise)

Preceding gene: 91789331

Following gene: 91789335

Centisome position: 70.77

GC content: 59.86

Gene sequence:

>279_bases
ATGACCGCGCAAGACCAGCTCAACACTTTGCACACCGCGCTGCAGCAACTGCGGGCCGACACCCTGGGTGTTGCCGCTTT
TTCGCAGTTTGCGGCGCAACAGCAAACGCTGGCAGCCGCACTGCCGCCACGTTTTTCCGAGGTGCTTGGGCAACTGCTCA
ACCGGCTGGAGTCCAGCGCCCTGTTCACCGAAGAAAGCTGCTCCTTCAGCCAGCAGGATCTGCTGGACAGCCTGCAGCTG
TGGATTGACAAGGCGCAATGGCAGCTTCAAAAAAGCTGA

Upstream 100 bases:

>100_bases
TACAACCTATTGGACCTTCACACCTAGCGCTGAAGGGACACCGGCTGAAGGGACACCGGCCATCCAGGCCTCCACAGGAC
CACGTTTCTACAATAACGCC

Downstream 100 bases:

>100_bases
AGCTCTTCAGGCGCTTCAACCGCTTCAGCATCAGACGTGCCGCTTGACGGCTTCGGGGCGCTTGACCGGCACCGGCAGGG
CATCGGCCCGCTCGTGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MTAQDQLNTLHTALQQLRADTLGVAAFSQFAAQQQTLAAALPPRFSEVLGQLLNRLESSALFTEESCSFSQQDLLDSLQL
WIDKAQWQLQKS

Sequences:

>Translated_92_residues
MTAQDQLNTLHTALQQLRADTLGVAAFSQFAAQQQTLAAALPPRFSEVLGQLLNRLESSALFTEESCSFSQQDLLDSLQL
WIDKAQWQLQKS
>Mature_91_residues
TAQDQLNTLHTALQQLRADTLGVAAFSQFAAQQQTLAAALPPRFSEVLGQLLNRLESSALFTEESCSFSQQDLLDSLQLW
IDKAQWQLQKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10252; Mature: 10120

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQDQLNTLHTALQQLRADTLGVAAFSQFAAQQQTLAAALPPRFSEVLGQLLNRLESSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LFTEESCSFSQQDLLDSLQLWIDKAQWQLQKS
HCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TAQDQLNTLHTALQQLRADTLGVAAFSQFAAQQQTLAAALPPRFSEVLGQLLNRLESSA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LFTEESCSFSQQDLLDSLQLWIDKAQWQLQKS
HCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA