| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789275
Identifier: 91789275
GI number: 91789275
Start: 3617449
End: 3618411
Strand: Direct
Name: 91789275
Synonym: Bpro_3420
Alternate gene names: NA
Gene position: 3617449-3618411 (Clockwise)
Preceding gene: 91789274
Following gene: 91789276
Centisome position: 69.56
GC content: 63.66
Gene sequence:
>963_bases ATGAGAAAACTGTTATCTGCCCTAATGATGGGTCTGCTAGCTACGGCAAGCGTGCATGCTCAAACCTGGCCCACCAAGAG CGTGTCGCTGGTGGTGCCCTTCCCGGCCGGCGGCTCGACCGACACCGTCGCCCGCGCCATCGGTCCCAAGCTCACGCAGA GCCTGGGACAGCCCTTTGTCATCGACAACAAGGCCGGCGCAACCGGCACCATTGGCGCGACGCTGGTCAAGCGCGCGACG CCCGACGGCTACACCTTCCTCGTGACCTCGCTCGGCCCGCTGGTCATTGCACCGCACCTGATCAAGGGCATGCAATACGA CGCACTGAAAGACTTTGACCCCATCGCCGTCGCCGTCCAGGCGCCCAACGTGCTGGTGGTGCCGGCCAACTCGCCCTACA AGACCGTCGGCGCACTGGTGGCCTACAACAAGATAAATCCCGGCAAGATGTCTTTTGCCTCCTCCGGCAACGGGTCGAGC GATCACCTCACGGCCGAGCTGTTCTGGCAGCTGACGGGCACCAGCGGCTCGCACATTCCCTACAAGGGCGGCGCACCGGC CATCACCGACCTGCTCGGCGGGCAGGTTGACGCCTCGTTCCAGAACATCAATGCCGTGGTGCAGCACATCAGGTCCGGCA AGCTGAAAGCCCTGGCCATCACCTCGCAAAAGCGCTCCGCCGTCCTGCCCGACGTCCCCACGTTCGGCGAGGTCGGTGTG AAGGGCCTGGAGGTGTACTCCTGGCAAGCCGTGGTGGCGCCCAAGGGCCTGCCCGCCGACGTGCGCAACAAGGCACATGC CGCCGTCATTGCCGCGCTCAATGACCCGCAGGTCAGGCAGCAATTCGTGTCCGTCGGCTTTGAAATCGTCGGCAACACGC CGGCCCAGTTCGCCGCCTTCCAGCAGCAGGAGTTTGCGCGCTGGAAGAAAGTCATAGACACTGGAAAAATTACCGCCGAT TGA
Upstream 100 bases:
>100_bases GCCGCTGTCGGACCTCAAGCCCGCCGAGATGGAACAGCTCGGCCAGTTGATCGCCAAACTCGGCGCCCAGTAAAGCGCCA CCATCCCAGGAGACATCTTC
Downstream 100 bases:
>100_bases GGCCGATTGAGGCTGATTCAACGATTCAAGATTCAAAGCGATTGAGACCCCTTCCATGTCCAACATGCCCGACACCTCCA CACCCCTGATCACCGAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MRKLLSALMMGLLATASVHAQTWPTKSVSLVVPFPAGGSTDTVARAIGPKLTQSLGQPFVIDNKAGATGTIGATLVKRAT PDGYTFLVTSLGPLVIAPHLIKGMQYDALKDFDPIAVAVQAPNVLVVPANSPYKTVGALVAYNKINPGKMSFASSGNGSS DHLTAELFWQLTGTSGSHIPYKGGAPAITDLLGGQVDASFQNINAVVQHIRSGKLKALAITSQKRSAVLPDVPTFGEVGV KGLEVYSWQAVVAPKGLPADVRNKAHAAVIAALNDPQVRQQFVSVGFEIVGNTPAQFAAFQQQEFARWKKVIDTGKITAD
Sequences:
>Translated_320_residues MRKLLSALMMGLLATASVHAQTWPTKSVSLVVPFPAGGSTDTVARAIGPKLTQSLGQPFVIDNKAGATGTIGATLVKRAT PDGYTFLVTSLGPLVIAPHLIKGMQYDALKDFDPIAVAVQAPNVLVVPANSPYKTVGALVAYNKINPGKMSFASSGNGSS DHLTAELFWQLTGTSGSHIPYKGGAPAITDLLGGQVDASFQNINAVVQHIRSGKLKALAITSQKRSAVLPDVPTFGEVGV KGLEVYSWQAVVAPKGLPADVRNKAHAAVIAALNDPQVRQQFVSVGFEIVGNTPAQFAAFQQQEFARWKKVIDTGKITAD >Mature_320_residues MRKLLSALMMGLLATASVHAQTWPTKSVSLVVPFPAGGSTDTVARAIGPKLTQSLGQPFVIDNKAGATGTIGATLVKRAT PDGYTFLVTSLGPLVIAPHLIKGMQYDALKDFDPIAVAVQAPNVLVVPANSPYKTVGALVAYNKINPGKMSFASSGNGSS DHLTAELFWQLTGTSGSHIPYKGGAPAITDLLGGQVDASFQNINAVVQHIRSGKLKALAITSQKRSAVLPDVPTFGEVGV KGLEVYSWQAVVAPKGLPADVRNKAHAAVIAALNDPQVRQQFVSVGFEIVGNTPAQFAAFQQQEFARWKKVIDTGKITAD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33564; Mature: 33564
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLLSALMMGLLATASVHAQTWPTKSVSLVVPFPAGGSTDTVARAIGPKLTQSLGQPFV CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHCHHHHHHCCCCEE IDNKAGATGTIGATLVKRATPDGYTFLVTSLGPLVIAPHLIKGMQYDALKDFDPIAVAVQ EECCCCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCHHHCCCCCEEEEEE APNVLVVPANSPYKTVGALVAYNKINPGKMSFASSGNGSSDHLTAELFWQLTGTSGSHIP CCCEEEEECCCCHHHHHHEEEECCCCCCCEEECCCCCCCCCCEEEEEEEEEECCCCCCCC YKGGAPAITDLLGGQVDASFQNINAVVQHIRSGKLKALAITSQKRSAVLPDVPTFGEVGV CCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHCCC KGLEVYSWQAVVAPKGLPADVRNKAHAAVIAALNDPQVRQQFVSVGFEIVGNTPAQFAAF CEEEEEEEEEEECCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHCCEEECCCHHHHHHH QQQEFARWKKVIDTGKITAD HHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRKLLSALMMGLLATASVHAQTWPTKSVSLVVPFPAGGSTDTVARAIGPKLTQSLGQPFV CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHCHHHHHHCCCCEE IDNKAGATGTIGATLVKRATPDGYTFLVTSLGPLVIAPHLIKGMQYDALKDFDPIAVAVQ EECCCCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCHHHCCCCCEEEEEE APNVLVVPANSPYKTVGALVAYNKINPGKMSFASSGNGSSDHLTAELFWQLTGTSGSHIP CCCEEEEECCCCHHHHHHEEEECCCCCCCEEECCCCCCCCCCEEEEEEEEEECCCCCCCC YKGGAPAITDLLGGQVDASFQNINAVVQHIRSGKLKALAITSQKRSAVLPDVPTFGEVGV CCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHCCC KGLEVYSWQAVVAPKGLPADVRNKAHAAVIAALNDPQVRQQFVSVGFEIVGNTPAQFAAF CEEEEEEEEEEECCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHCCEEECCCHHHHHHH QQQEFARWKKVIDTGKITAD HHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]