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The map label for this gene is pobB [H]

Identifier: 91789241

GI number: 91789241

Start: 3578557

End: 3579546

Strand: Reverse

Name: pobB [H]

Synonym: Bpro_3385

Alternate gene names: 91789241

Gene position: 3579546-3578557 (Counterclockwise)

Preceding gene: 91789242

Following gene: 91789240

Centisome position: 68.83

GC content: 66.16

Gene sequence:

>990_bases
ATGAAAAGTACCCAGACCTGGCAACCCGCCACCGTTGCCGCCGTCCGCGACGCCACGCCCACCGTGCGCGAATTCGAAAT
CCGTCCGGCAGAGGGCTCCGCTGCGCCGTGGCAGGCCGGCTCGCATTTGCAGCTGCAGGTGCTGGTCAACGGCAAGGTGC
AGACCCGCTCCTATTCGCTGGTGGGCCTGCCCGATGGCGTGAGCTATCGCATTGCCGTCAAACGCATGGACGACGGCCGG
GGCGGCTCGCTGGCCATGTGGCGGCTGGCCGTGGGTGACCGGCTGCAGATCAGCGATCCGCAAAACCATTTTCAGCTGGA
CCTGTCGGCGCCGCACTATCTGATCGTGGCCGGCGGCATAGGCATCACGCCGCTGGTGATGATGGCCCAGCAGCTTCAGG
GGCAGTGCCAGAAGTCGGGCGCCACGCTGCGCATGCTCTACGGTGCGCGCACGCAAGAGGAACTGGCGTTTTTGCCGCTG
CTGCGCGAGGCGTTGGGCGATGCCCTGCAGACCTTCGTGGCCGGGCGCGGCGAAAGCATGGACCTGGCCGCCGCCATTGG
CGCCTTGCCCGCGGGCGGGCAGCTGTATACCTGCGGCCCGGTGTCCATGCTGGAGGCCGTCAGGAAAAGCTGGGCCCAGG
CCGGTCGCCCGCTGGCCGACCTTCGCTTTGAAACCTTTGGCAGCAGCGGCCGTTTTGCTGCCCAGGCCTTCAGGGTGCGG
GTGCCGCGCCATCAGGTCGACATCATGGTGCCGGCCGACACCACGCTGCTGGACGCTCTGGAGAGCGCCGGCGTGGAAAG
CATTTTTGATTGCCGCCGCGGCGAGTGCGGCCTGTGCGCGATGGATGTCCTCGCGCTGGACGGCGAGATCGATCACCGCG
ATGTGTTTTTGAGCGAGCACGAAAAGCAGCAGAACACGCGCATCTGTACCTGCGTATCACGGGTGGTCGGCTCGCTGACC
CTGGATTCTTCCTATAGACCAGAGGCCTGA

Upstream 100 bases:

>100_bases
GCCAGGGCTCGGCCATGCCGGCCTCGATGAAAGCCATGAAGCTGATCCGCCGGCGCGGCTGACCACCTCTGACCACTTCT
GACCACCTGATTCCCAGAAC

Downstream 100 bases:

>100_bases
GGGCCCTAACACTGCACTCCCGATACCGTTTTCGAATCCGCTTTTATCCCGTTTTGATCCCGTTCGATTGAGTTCGCATT
AATTACCAGGAGACATCCAT

Product: oxidoreductase FAD-binding subunit

Products: NA

Alternate protein names: 4-carboxydiphenyl ether; phenoxybenzoate dioxygenase subunit beta [H]

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MKSTQTWQPATVAAVRDATPTVREFEIRPAEGSAAPWQAGSHLQLQVLVNGKVQTRSYSLVGLPDGVSYRIAVKRMDDGR
GGSLAMWRLAVGDRLQISDPQNHFQLDLSAPHYLIVAGGIGITPLVMMAQQLQGQCQKSGATLRMLYGARTQEELAFLPL
LREALGDALQTFVAGRGESMDLAAAIGALPAGGQLYTCGPVSMLEAVRKSWAQAGRPLADLRFETFGSSGRFAAQAFRVR
VPRHQVDIMVPADTTLLDALESAGVESIFDCRRGECGLCAMDVLALDGEIDHRDVFLSEHEKQQNTRICTCVSRVVGSLT
LDSSYRPEA

Sequences:

>Translated_329_residues
MKSTQTWQPATVAAVRDATPTVREFEIRPAEGSAAPWQAGSHLQLQVLVNGKVQTRSYSLVGLPDGVSYRIAVKRMDDGR
GGSLAMWRLAVGDRLQISDPQNHFQLDLSAPHYLIVAGGIGITPLVMMAQQLQGQCQKSGATLRMLYGARTQEELAFLPL
LREALGDALQTFVAGRGESMDLAAAIGALPAGGQLYTCGPVSMLEAVRKSWAQAGRPLADLRFETFGSSGRFAAQAFRVR
VPRHQVDIMVPADTTLLDALESAGVESIFDCRRGECGLCAMDVLALDGEIDHRDVFLSEHEKQQNTRICTCVSRVVGSLT
LDSSYRPEA
>Mature_329_residues
MKSTQTWQPATVAAVRDATPTVREFEIRPAEGSAAPWQAGSHLQLQVLVNGKVQTRSYSLVGLPDGVSYRIAVKRMDDGR
GGSLAMWRLAVGDRLQISDPQNHFQLDLSAPHYLIVAGGIGITPLVMMAQQLQGQCQKSGATLRMLYGARTQEELAFLPL
LREALGDALQTFVAGRGESMDLAAAIGALPAGGQLYTCGPVSMLEAVRKSWAQAGRPLADLRFETFGSSGRFAAQAFRVR
VPRHQVDIMVPADTTLLDALESAGVESIFDCRRGECGLCAMDVLALDGEIDHRDVFLSEHEKQQNTRICTCVSRVVGSLT
LDSSYRPEA

Specific function: Degrades exclusively diarylether compounds having carboxyl groups in the 3- or 4-position. Yields a hemiacetal that spontaneously hydrolyzes to phenol and protocatechuate [H]

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788104, Length=319, Percent_Identity=33.2288401253918, Blast_Score=151, Evalue=5e-38,
Organism=Escherichia coli, GI1787098, Length=262, Percent_Identity=29.7709923664122, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1787658, Length=317, Percent_Identity=26.1829652996845, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788903, Length=234, Percent_Identity=30.3418803418803, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35615; Mature: 35615

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTQTWQPATVAAVRDATPTVREFEIRPAEGSAAPWQAGSHLQLQVLVNGKVQTRSYSL
CCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCEEEEEEEEE
VGLPDGVSYRIAVKRMDDGRGGSLAMWRLAVGDRLQISDPQNHFQLDLSAPHYLIVAGGI
EECCCCCEEEEEEEEECCCCCCCEEEEEEECCCEEEECCCCCCEEEEECCCEEEEEECCC
GITPLVMMAQQLQGQCQKSGATLRMLYGARTQEELAFLPLLREALGDALQTFVAGRGESM
CHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DLAAAIGALPAGGQLYTCGPVSMLEAVRKSWAQAGRPLADLRFETFGSSGRFAAQAFRVR
HHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHCCHHHCCCCCCHHHHHHEEE
VPRHQVDIMVPADTTLLDALESAGVESIFDCRRGECGLCAMDVLALDGEIDHRDVFLSEH
CCCCEEEEEECCCHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHH
EKQQNTRICTCVSRVVGSLTLDSSYRPEA
HHHHCHHHHHHHHHHHCCEEECCCCCCCC
>Mature Secondary Structure
MKSTQTWQPATVAAVRDATPTVREFEIRPAEGSAAPWQAGSHLQLQVLVNGKVQTRSYSL
CCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCEEEEEEEEE
VGLPDGVSYRIAVKRMDDGRGGSLAMWRLAVGDRLQISDPQNHFQLDLSAPHYLIVAGGI
EECCCCCEEEEEEEEECCCCCCCEEEEEEECCCEEEECCCCCCEEEEECCCEEEEEECCC
GITPLVMMAQQLQGQCQKSGATLRMLYGARTQEELAFLPLLREALGDALQTFVAGRGESM
CHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DLAAAIGALPAGGQLYTCGPVSMLEAVRKSWAQAGRPLADLRFETFGSSGRFAAQAFRVR
HHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHCCHHHCCCCCCHHHHHHEEE
VPRHQVDIMVPADTTLLDALESAGVESIFDCRRGECGLCAMDVLALDGEIDHRDVFLSEH
CCCCEEEEEECCCHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHH
EKQQNTRICTCVSRVVGSLTLDSSYRPEA
HHHHCHHHHHHHHHHHCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FMN. [C]

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7710319 [H]