| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789213
Identifier: 91789213
GI number: 91789213
Start: 3553069
End: 3553626
Strand: Reverse
Name: 91789213
Synonym: Bpro_3357
Alternate gene names: NA
Gene position: 3553626-3553069 (Counterclockwise)
Preceding gene: 91789214
Following gene: 91789212
Centisome position: 68.34
GC content: 57.17
Gene sequence:
>558_bases ATGAACGAACCACTGGGCAAGTGGACCAAGATCACTTTGGCCGTGTTTTTGTGTGTAGTGGCGTTGGTGCTCCTGGGCAA CCAGGACCGCATGCATATCTACAGCACCTACTTTCGCGAGACATCGCCGCAAGTGCAGATGCGGCTTGGTGAACTTTCCG GCGACATGGACGAGGCGGCGATTCGAAAACATTTCGATGGTGTTCCCTTCAAATGCCACAACGAGCCACTGGCCACGACA GGCTTGGGGGACAGGCTTTGCTACACAAACATCGACAAAGCCGACGGCTTGCCTGCATTCACGTTAGTCATCTTCTTCAA GAAAGGCCATTTGAGCCACGCCGTGGTGCAAGTGCCGTGGTGGGTCCATGGCTCCTGGCGCGACCAGCTGGGAGCGCAAT ATGGAAAGGCCAACCGTGCTGGCGTCGTGTCACGCCTTGGTGGCCCGGTTTTGCGCTGGCCCATGCCCAACGGTCATCTG GAATACAACCGCGAACGCAGCTTGAATCCGCTGGAGTGGAGTGCCGTTTTCTGGACGGCTGGTGCGGGTAAGTCTTAG
Upstream 100 bases:
>100_bases GTTAACCTGGAGCCTGACTCCAATTCCTCCCCAGGAACGCGCTAAGCTCAGGACAAAGACGCGCACGACCACCGATGCGC CAACAAGGGGAGGGGAAGCA
Downstream 100 bases:
>100_bases TTTTTAAACATAAAAGGAGAGGGAGCAAATGGCGCGAAGAAAAAAGACAAGCCCGTTGGAGGACTGGCTGGATTTGGTAG CCATGCTGCCGTGGTGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MNEPLGKWTKITLAVFLCVVALVLLGNQDRMHIYSTYFRETSPQVQMRLGELSGDMDEAAIRKHFDGVPFKCHNEPLATT GLGDRLCYTNIDKADGLPAFTLVIFFKKGHLSHAVVQVPWWVHGSWRDQLGAQYGKANRAGVVSRLGGPVLRWPMPNGHL EYNRERSLNPLEWSAVFWTAGAGKS
Sequences:
>Translated_185_residues MNEPLGKWTKITLAVFLCVVALVLLGNQDRMHIYSTYFRETSPQVQMRLGELSGDMDEAAIRKHFDGVPFKCHNEPLATT GLGDRLCYTNIDKADGLPAFTLVIFFKKGHLSHAVVQVPWWVHGSWRDQLGAQYGKANRAGVVSRLGGPVLRWPMPNGHL EYNRERSLNPLEWSAVFWTAGAGKS >Mature_185_residues MNEPLGKWTKITLAVFLCVVALVLLGNQDRMHIYSTYFRETSPQVQMRLGELSGDMDEAAIRKHFDGVPFKCHNEPLATT GLGDRLCYTNIDKADGLPAFTLVIFFKKGHLSHAVVQVPWWVHGSWRDQLGAQYGKANRAGVVSRLGGPVLRWPMPNGHL EYNRERSLNPLEWSAVFWTAGAGKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20750; Mature: 20750
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEPLGKWTKITLAVFLCVVALVLLGNQDRMHIYSTYFRETSPQVQMRLGELSGDMDEAA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCHHHHHHHHHCCCHHHHH IRKHFDGVPFKCHNEPLATTGLGDRLCYTNIDKADGLPAFTLVIFFKKGHLSHAVVQVPW HHHHCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEECE WVHGSWRDQLGAQYGKANRAGVVSRLGGPVLRWPMPNGHLEYNRERSLNPLEWSAVFWTA EECCCHHHHHHHHHCCCCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEC GAGKS CCCCC >Mature Secondary Structure MNEPLGKWTKITLAVFLCVVALVLLGNQDRMHIYSTYFRETSPQVQMRLGELSGDMDEAA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCHHHHHHHHHCCCHHHHH IRKHFDGVPFKCHNEPLATTGLGDRLCYTNIDKADGLPAFTLVIFFKKGHLSHAVVQVPW HHHHCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEECE WVHGSWRDQLGAQYGKANRAGVVSRLGGPVLRWPMPNGHLEYNRERSLNPLEWSAVFWTA EECCCHHHHHHHHHCCCCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEC GAGKS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA