| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is acsA [H]
Identifier: 91789214
GI number: 91789214
Start: 3553874
End: 3555940
Strand: Reverse
Name: acsA [H]
Synonym: Bpro_3358
Alternate gene names: 91789214
Gene position: 3555940-3553874 (Counterclockwise)
Preceding gene: 91789219
Following gene: 91789213
Centisome position: 68.38
GC content: 63.47
Gene sequence:
>2067_bases ATGTCAAAAGACAAGTTGCCGCGCCACGCCACCGAGCAGCAGAGTGCCGATATCTCCGAGATCTCCGAGGCCCAGATCGC GGTGCATTGGCCGGAGGAGGGCTACTTCTCGCCGTCCAACCCCTTCATCGCGCAGGCCAATTTGACGGACGCGGGCATCT TCGCGCGTTTTGCCCTCGACAAGTTTCCCGAGTGCTTCAAGGAGTTCGCGGACCTGCTGGACTGGTACAAGTACTGGGAG ACGACGCTCGACACCAGCAATCCCCCGTTCTGGCGCTGGTTCGTCGGCGGCAAGATCAACGCTTGCTACAACTGCGTGGA CCGCCACCTTGGCCAGCACAAGAACAAGACGGCGATCCATTTTGTGCCCGAGCCGGAGGACGAGGCGCCACAGCACCTCA CCTACCAGGAGCTTTTCGTGCGCGTCAACGAGTTCGCGGCCTTGTTGCGTGACTTCTGCGGCCTGAAGGCGGGCGACCGG GTGACCTTGCATATGCCGATGGTGGCGGAGCTGCCCATCACCATGCTTGCCTGCGCGCGGCTCGGCGTGATTCACTCGCA GGTGTTCAGCGGATTCAGCGGCAAGGCCTGCGCCGACCGCGTCGCGGATTCCGAGAGCCGCGTGTTGATCACCATGGACG CCTATCACCGCGCCGGCAATCTGCTGGACCATAAGGAGAAAGCCGACATCGCGGTCATGGAGGCCGCCAGCCACGGCCAA CAGGTCGACAAGGTGCTGATCTGGCAGCGCTACCCGGGCAAAAACTCCAGCCCCACGAAGCTCGTGGAAGGACGCGACTT CGTCATCAACGACGTCCTCAAGCAGTTCCGTGGCAAGCGTGTCGAGCCCGTGCAGATGCCGGCAGAGGCGCCGCTTTTCC TGATGTACACGAGCGGCACGACGGGGCGGCCCAAAGGCTGCCAGCACGGCATCGGCGGCTACCTCGCCTACGTCACCTGG ACATCGAAGTTCATCCAGGACATCCACCCCGAGGACGTGTACTGGTGCATGGCCGACATCGGCTGGATCACAGGCCATTC CTACATCGTCTACGGCCCGCTGGCGCTCGCCGCTTCTTCGGTGGTGTACGAAGGTGTGCCAACCTATCCGGACGCCGGAC GGCCCTGGCGTATCGCTGAAAACCTCGACGTCAATATCTTCCACACGTCGCCCACCGCGATCCGCGCGCTACGGCGCGAC GGACCCGACGAGCCCGCCAAGTACAACCACCACTTCAAACACATGACGACCGTGGGCGAGCCGATCGAGCCCGAAGTCTG GAAGTGGTACCACCGCATGGTCGGCAAGGGCGAAGCAGTGATCGTGGACACCTGGTGGCAGACCGAAAACGGCGGATTCC TTTGCAGCACGGTGCCGGCGATCCACAAGATGAAGCCCGGCAGCACGGGCCCCGCGATTCCAGGCATTCATCCGGTGATC TACGACGACGAGGGCAAGGAGCTTGTGAGCGGTTCGGGCAAGGCGGGCAACATCTGCATCCGCAACCCCTGGCCCGGTGG TTTCCAGACCATCTGGAAAGACCCCGAGCGCTACGTGCGCCAGTACTACGCGCGCTATTGCGCAGATCCCAAGAGCAAAG ACTGGCGCGACTGGCCCTACATGGCGGGTGATGGCGCGGTGCAGGCGGCCGACGGTTACTACCGGATCCTCGGCCGCATC GACGACGTGATCAACGTCGCCGGCCATCGCCTGGGCACCAAGGAAATCGAATCGGCCGCGCTGCTCGTGCCCGAGGTCGT CGAAGCGGCCGTGGTTCCAGTCGCCGACCCGATCAAGGGCAAGGTGCCCGACCTCTATGTTGCGTTGAAGCCGGGACTGG CGCCTTCCGAGGAGATCGCGAACAGGGTCTCGGCATCGGTCGTGTCCGAGATCGGCGCCATCGCGCGGCCTCGCCGAGTG ATTGTCGTTCCCGATATGCCCAAGACCCGCTCGGGAAAGATCATGCGCCGCGTGCTCGCGGCGATCTCGAATCACCTGGA TCCTGGCGACGTGTCCACCCTCGCCAATCCGGAGGTCGTCGACAAGATCAAGGAGCTGGCCAAGTAG
Upstream 100 bases:
>100_bases ATTATTGCGACAAACGCAGTTCGCTCGTTGCGCTTGACGGCGGCACCAAGGCGCGCCGAGTGCCTGCATCGGAGTCACGG AAAATCAAGGAGGAACGGTC
Downstream 100 bases:
>100_bases CGCCAATGCGCGCACGACGCGGGATCCCCGCGAGCTCTCGCGCAGCCAGGGGCGGGGTTGCCACGCCCTTGCGCAAAGCT GACTTTTGCCATGAGGGTCA
Product: AMP-dependent synthetase and ligase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acyl-activating enzyme [H]
Number of amino acids: Translated: 688; Mature: 687
Protein sequence:
>688_residues MSKDKLPRHATEQQSADISEISEAQIAVHWPEEGYFSPSNPFIAQANLTDAGIFARFALDKFPECFKEFADLLDWYKYWE TTLDTSNPPFWRWFVGGKINACYNCVDRHLGQHKNKTAIHFVPEPEDEAPQHLTYQELFVRVNEFAALLRDFCGLKAGDR VTLHMPMVAELPITMLACARLGVIHSQVFSGFSGKACADRVADSESRVLITMDAYHRAGNLLDHKEKADIAVMEAASHGQ QVDKVLIWQRYPGKNSSPTKLVEGRDFVINDVLKQFRGKRVEPVQMPAEAPLFLMYTSGTTGRPKGCQHGIGGYLAYVTW TSKFIQDIHPEDVYWCMADIGWITGHSYIVYGPLALAASSVVYEGVPTYPDAGRPWRIAENLDVNIFHTSPTAIRALRRD GPDEPAKYNHHFKHMTTVGEPIEPEVWKWYHRMVGKGEAVIVDTWWQTENGGFLCSTVPAIHKMKPGSTGPAIPGIHPVI YDDEGKELVSGSGKAGNICIRNPWPGGFQTIWKDPERYVRQYYARYCADPKSKDWRDWPYMAGDGAVQAADGYYRILGRI DDVINVAGHRLGTKEIESAALLVPEVVEAAVVPVADPIKGKVPDLYVALKPGLAPSEEIANRVSASVVSEIGAIARPRRV IVVPDMPKTRSGKIMRRVLAAISNHLDPGDVSTLANPEVVDKIKELAK
Sequences:
>Translated_688_residues MSKDKLPRHATEQQSADISEISEAQIAVHWPEEGYFSPSNPFIAQANLTDAGIFARFALDKFPECFKEFADLLDWYKYWE TTLDTSNPPFWRWFVGGKINACYNCVDRHLGQHKNKTAIHFVPEPEDEAPQHLTYQELFVRVNEFAALLRDFCGLKAGDR VTLHMPMVAELPITMLACARLGVIHSQVFSGFSGKACADRVADSESRVLITMDAYHRAGNLLDHKEKADIAVMEAASHGQ QVDKVLIWQRYPGKNSSPTKLVEGRDFVINDVLKQFRGKRVEPVQMPAEAPLFLMYTSGTTGRPKGCQHGIGGYLAYVTW TSKFIQDIHPEDVYWCMADIGWITGHSYIVYGPLALAASSVVYEGVPTYPDAGRPWRIAENLDVNIFHTSPTAIRALRRD GPDEPAKYNHHFKHMTTVGEPIEPEVWKWYHRMVGKGEAVIVDTWWQTENGGFLCSTVPAIHKMKPGSTGPAIPGIHPVI YDDEGKELVSGSGKAGNICIRNPWPGGFQTIWKDPERYVRQYYARYCADPKSKDWRDWPYMAGDGAVQAADGYYRILGRI DDVINVAGHRLGTKEIESAALLVPEVVEAAVVPVADPIKGKVPDLYVALKPGLAPSEEIANRVSASVVSEIGAIARPRRV IVVPDMPKTRSGKIMRRVLAAISNHLDPGDVSTLANPEVVDKIKELAK >Mature_687_residues SKDKLPRHATEQQSADISEISEAQIAVHWPEEGYFSPSNPFIAQANLTDAGIFARFALDKFPECFKEFADLLDWYKYWET TLDTSNPPFWRWFVGGKINACYNCVDRHLGQHKNKTAIHFVPEPEDEAPQHLTYQELFVRVNEFAALLRDFCGLKAGDRV TLHMPMVAELPITMLACARLGVIHSQVFSGFSGKACADRVADSESRVLITMDAYHRAGNLLDHKEKADIAVMEAASHGQQ VDKVLIWQRYPGKNSSPTKLVEGRDFVINDVLKQFRGKRVEPVQMPAEAPLFLMYTSGTTGRPKGCQHGIGGYLAYVTWT SKFIQDIHPEDVYWCMADIGWITGHSYIVYGPLALAASSVVYEGVPTYPDAGRPWRIAENLDVNIFHTSPTAIRALRRDG PDEPAKYNHHFKHMTTVGEPIEPEVWKWYHRMVGKGEAVIVDTWWQTENGGFLCSTVPAIHKMKPGSTGPAIPGIHPVIY DDEGKELVSGSGKAGNICIRNPWPGGFQTIWKDPERYVRQYYARYCADPKSKDWRDWPYMAGDGAVQAADGYYRILGRID DVINVAGHRLGTKEIESAALLVPEVVEAAVVPVADPIKGKVPDLYVALKPGLAPSEEIANRVSASVVSEIGAIARPRRVI VVPDMPKTRSGKIMRRVLAAISNHLDPGDVSTLANPEVVDKIKELAK
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI8923896, Length=622, Percent_Identity=40.8360128617363, Blast_Score=449, Evalue=1e-126, Organism=Homo sapiens, GI253970489, Length=634, Percent_Identity=40.6940063091483, Blast_Score=445, Evalue=1e-125, Organism=Homo sapiens, GI28416953, Length=600, Percent_Identity=38.3333333333333, Blast_Score=404, Evalue=1e-112, Organism=Homo sapiens, GI13375727, Length=637, Percent_Identity=34.850863422292, Blast_Score=354, Evalue=2e-97, Organism=Homo sapiens, GI42544132, Length=535, Percent_Identity=26.5420560747664, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI38505220, Length=538, Percent_Identity=26.7657992565056, Blast_Score=149, Evalue=8e-36, Organism=Homo sapiens, GI115511026, Length=534, Percent_Identity=26.2172284644195, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI122937307, Length=530, Percent_Identity=26.6037735849057, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI58082049, Length=537, Percent_Identity=25.8845437616387, Blast_Score=139, Evalue=7e-33, Organism=Homo sapiens, GI31982927, Length=601, Percent_Identity=21.9633943427621, Blast_Score=135, Evalue=2e-31, Organism=Homo sapiens, GI157311624, Length=537, Percent_Identity=24.9534450651769, Blast_Score=129, Evalue=9e-30, Organism=Homo sapiens, GI157311622, Length=537, Percent_Identity=24.9534450651769, Blast_Score=129, Evalue=9e-30, Organism=Escherichia coli, GI1790505, Length=631, Percent_Identity=41.5213946117274, Blast_Score=469, Evalue=1e-133, Organism=Escherichia coli, GI1786529, Length=643, Percent_Identity=36.2363919129082, Blast_Score=367, Evalue=1e-102, Organism=Caenorhabditis elegans, GI71982997, Length=604, Percent_Identity=39.4039735099338, Blast_Score=402, Evalue=1e-112, Organism=Caenorhabditis elegans, GI71983001, Length=604, Percent_Identity=39.4039735099338, Blast_Score=402, Evalue=1e-112, Organism=Caenorhabditis elegans, GI17569507, Length=692, Percent_Identity=22.6878612716763, Blast_Score=125, Evalue=8e-29, Organism=Saccharomyces cerevisiae, GI6323182, Length=607, Percent_Identity=41.0214168039539, Blast_Score=439, Evalue=1e-123, Organism=Saccharomyces cerevisiae, GI6319264, Length=641, Percent_Identity=40.0936037441498, Blast_Score=427, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6319699, Length=402, Percent_Identity=24.3781094527363, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24667955, Length=674, Percent_Identity=36.646884272997, Blast_Score=429, Evalue=1e-120, Organism=Drosophila melanogaster, GI62472339, Length=566, Percent_Identity=39.3992932862191, Blast_Score=409, Evalue=1e-114, Organism=Drosophila melanogaster, GI24667959, Length=528, Percent_Identity=39.3939393939394, Blast_Score=382, Evalue=1e-106, Organism=Drosophila melanogaster, GI21355225, Length=618, Percent_Identity=34.6278317152104, Blast_Score=332, Evalue=8e-91, Organism=Drosophila melanogaster, GI24581924, Length=538, Percent_Identity=22.6765799256506, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24648260, Length=380, Percent_Identity=22.6315789473684, Blast_Score=71, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.1 [H]
Molecular weight: Translated: 76671; Mature: 76540
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDKLPRHATEQQSADISEISEAQIAVHWPEEGYFSPSNPFIAQANLTDAGIFARFALD CCCCCCCCCCCHHHCCCHHHHCCCEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHH KFPECFKEFADLLDWYKYWETTLDTSNPPFWRWFVGGKINACYNCVDRHLGQHKNKTAIH HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCEEE FVPEPEDEAPQHLTYQELFVRVNEFAALLRDFCGLKAGDRVTLHMPMVAELPITMLACAR ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH LGVIHSQVFSGFSGKACADRVADSESRVLITMDAYHRAGNLLDHKEKADIAVMEAASHGQ HHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEECHHHCCCCCCCCCCCCEEEEHHHHHHH QVDKVLIWQRYPGKNSSPTKLVEGRDFVINDVLKQFRGKRVEPVQMPAEAPLFLMYTSGT HHHHEEEEEECCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC TGRPKGCQHGIGGYLAYVTWTSKFIQDIHPEDVYWCMADIGWITGHSYIVYGPLALAASS CCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHH VVYEGVPTYPDAGRPWRIAENLDVNIFHTSPTAIRALRRDGPDEPAKYNHHFKHMTTVGE HHHCCCCCCCCCCCCEEEECCCEEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCC PIEPEVWKWYHRMVGKGEAVIVDTWWQTENGGFLCSTVPAIHKMKPGSTGPAIPGIHPVI CCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEECCHHHHHCCCCCCCCCCCCCCCEE YDDEGKELVSGSGKAGNICIRNPWPGGFQTIWKDPERYVRQYYARYCADPKSKDWRDWPY ECCCCCHHHCCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCE MAGDGAVQAADGYYRILGRIDDVINVAGHRLGTKEIESAALLVPEVVEAAVVPVADPIKG ECCCCCEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC KVPDLYVALKPGLAPSEEIANRVSASVVSEIGAIARPRRVIVVPDMPKTRSGKIMRRVLA CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH AISNHLDPGDVSTLANPEVVDKIKELAK HHHCCCCCCCHHHCCCHHHHHHHHHHCC >Mature Secondary Structure SKDKLPRHATEQQSADISEISEAQIAVHWPEEGYFSPSNPFIAQANLTDAGIFARFALD CCCCCCCCCCHHHCCCHHHHCCCEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHH KFPECFKEFADLLDWYKYWETTLDTSNPPFWRWFVGGKINACYNCVDRHLGQHKNKTAIH HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCEEE FVPEPEDEAPQHLTYQELFVRVNEFAALLRDFCGLKAGDRVTLHMPMVAELPITMLACAR ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH LGVIHSQVFSGFSGKACADRVADSESRVLITMDAYHRAGNLLDHKEKADIAVMEAASHGQ HHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEECHHHCCCCCCCCCCCCEEEEHHHHHHH QVDKVLIWQRYPGKNSSPTKLVEGRDFVINDVLKQFRGKRVEPVQMPAEAPLFLMYTSGT HHHHEEEEEECCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC TGRPKGCQHGIGGYLAYVTWTSKFIQDIHPEDVYWCMADIGWITGHSYIVYGPLALAASS CCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHH VVYEGVPTYPDAGRPWRIAENLDVNIFHTSPTAIRALRRDGPDEPAKYNHHFKHMTTVGE HHHCCCCCCCCCCCCEEEECCCEEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCC PIEPEVWKWYHRMVGKGEAVIVDTWWQTENGGFLCSTVPAIHKMKPGSTGPAIPGIHPVI CCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEECCHHHHHCCCCCCCCCCCCCCCEE YDDEGKELVSGSGKAGNICIRNPWPGGFQTIWKDPERYVRQYYARYCADPKSKDWRDWPY ECCCCCHHHCCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCE MAGDGAVQAADGYYRILGRIDDVINVAGHRLGTKEIESAALLVPEVVEAAVVPVADPIKG ECCCCCEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC KVPDLYVALKPGLAPSEEIANRVSASVVSEIGAIARPRRVIVVPDMPKTRSGKIMRRVLA CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH AISNHLDPGDVSTLANPEVVDKIKELAK HHHCCCCCCCHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14500908 [H]