| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789212
Identifier: 91789212
GI number: 91789212
Start: 3552177
End: 3553040
Strand: Reverse
Name: 91789212
Synonym: Bpro_3356
Alternate gene names: NA
Gene position: 3553040-3552177 (Counterclockwise)
Preceding gene: 91789213
Following gene: 91789211
Centisome position: 68.32
GC content: 56.37
Gene sequence:
>864_bases ATGGCGCGAAGAAAAAAGACAAGCCCGTTGGAGGACTGGCTGGATTTGGTAGCCATGCTGCCGTGGTGGGTTGGTGTGGC GCTCGCCTTGGGCAGCTATGTTTTCTTGCATCAGATGGCCAAACCCACGCCCATACAAAACCTTCAACCAGGACAGATGG CAGCCGTGGCCGTTGGCTCCGTGATCACGGGTCTGGCATCAATCGGGCAGTTCTTCGTCCCGATCGTTTGCCTATTGGGC GCGCTGGGCTCTTTTTTAAGGCGACAACGACGGCAAACGCTTGCTGCAAATGTCTCCCAAAGCAAATCTGCCGATGCTCT TGACGAAATGTCGTGGCGTGAGTTCGAAATGCTTGTTGGTGAGGCGTTTCGTCTTCAAGGCTACCGAGTCGTTGAGATGG GTGGATCAGGGCCTGATGGCGGAATTGATCTTGTGCTGAGCAAAGGAACAGAAAAATTCCTGGTTCAATGCAAGCAGTGG AAGGCATTCAAAGTCAGCGTGACAGTGGTGCGCGAGCTTTACGGCGTGATGGCTGCCAAAGGCGCGGCCGGGGGCTTTGT TGTGACTTCTGGCATGTTCACTGAAGATGCAACGGCATTCGCTGCGGGCCGAAATATCACACTCATCGATGGCTCGCGTT TGCTTGGCTTGCTTGCGCAAGCCAAGGCGGCACGGCGCACTGTCAACGAGCCACCGCGGCGAGCGTTTGATGCGCCTGTG CCGTTACCTAGCGCGACACTCGCGTGTCCTGCTTGCGGTGCAGCCATGAAAAAGCGGGTTGCGAAGCGCGGGGGTAACGC AGGTGGGGAGTTTTGGGGTTGTACTCAATATCCGGTATGTAAGGGCACCCGGAATGTCGGTTGA
Upstream 100 bases:
>100_bases AACCGCGAACGCAGCTTGAATCCGCTGGAGTGGAGTGCCGTTTTCTGGACGGCTGGTGCGGGTAAGTCTTAGTTTTTAAA CATAAAAGGAGAGGGAGCAA
Downstream 100 bases:
>100_bases ACTCACCTTGACTCGCCGTTGACTGGAGTCTGACTCCGATTTCCGGCCCATTCTTCCCCAGTTACTCCGGTGCGTGCTGT TCGGGCGCTCCACTTTGTAG
Product: restriction endonuclease
Products: NA
Alternate protein names: Endonuclease; Transmembrane Protein; DNA Restriction; DNA poisomerase I Restriction Endonuclease; DNA poisomerase IRestriction Endonuclease; Restriction Endonuclease-Like Protein; Endonuclease Type II Restriction; Restriction Endonuclease Family Protein; DNA poisomerase Type IA Zn Finger Domain Protein; Mrr Restriction Protein-Related; Mrr Restriction System Protein; Restriction Endonuclease Mrr_cat Domain Protein
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MARRKKTSPLEDWLDLVAMLPWWVGVALALGSYVFLHQMAKPTPIQNLQPGQMAAVAVGSVITGLASIGQFFVPIVCLLG ALGSFLRRQRRQTLAANVSQSKSADALDEMSWREFEMLVGEAFRLQGYRVVEMGGSGPDGGIDLVLSKGTEKFLVQCKQW KAFKVSVTVVRELYGVMAAKGAAGGFVVTSGMFTEDATAFAAGRNITLIDGSRLLGLLAQAKAARRTVNEPPRRAFDAPV PLPSATLACPACGAAMKKRVAKRGGNAGGEFWGCTQYPVCKGTRNVG
Sequences:
>Translated_287_residues MARRKKTSPLEDWLDLVAMLPWWVGVALALGSYVFLHQMAKPTPIQNLQPGQMAAVAVGSVITGLASIGQFFVPIVCLLG ALGSFLRRQRRQTLAANVSQSKSADALDEMSWREFEMLVGEAFRLQGYRVVEMGGSGPDGGIDLVLSKGTEKFLVQCKQW KAFKVSVTVVRELYGVMAAKGAAGGFVVTSGMFTEDATAFAAGRNITLIDGSRLLGLLAQAKAARRTVNEPPRRAFDAPV PLPSATLACPACGAAMKKRVAKRGGNAGGEFWGCTQYPVCKGTRNVG >Mature_286_residues ARRKKTSPLEDWLDLVAMLPWWVGVALALGSYVFLHQMAKPTPIQNLQPGQMAAVAVGSVITGLASIGQFFVPIVCLLGA LGSFLRRQRRQTLAANVSQSKSADALDEMSWREFEMLVGEAFRLQGYRVVEMGGSGPDGGIDLVLSKGTEKFLVQCKQWK AFKVSVTVVRELYGVMAAKGAAGGFVVTSGMFTEDATAFAAGRNITLIDGSRLLGLLAQAKAARRTVNEPPRRAFDAPVP LPSATLACPACGAAMKKRVAKRGGNAGGEFWGCTQYPVCKGTRNVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30640; Mature: 30509
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRKKTSPLEDWLDLVAMLPWWVGVALALGSYVFLHQMAKPTPIQNLQPGQMAAVAVGS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH VITGLASIGQFFVPIVCLLGALGSFLRRQRRQTLAANVSQSKSADALDEMSWREFEMLVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH EAFRLQGYRVVEMGGSGPDGGIDLVLSKGTEKFLVQCKQWKAFKVSVTVVRELYGVMAAK HHHHHCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHC GAAGGFVVTSGMFTEDATAFAAGRNITLIDGSRLLGLLAQAKAARRTVNEPPRRAFDAPV CCCCCEEEECCCCCCCHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHCCCCC PLPSATLACPACGAAMKKRVAKRGGNAGGEFWGCTQYPVCKGTRNVG CCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARRKKTSPLEDWLDLVAMLPWWVGVALALGSYVFLHQMAKPTPIQNLQPGQMAAVAVGS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH VITGLASIGQFFVPIVCLLGALGSFLRRQRRQTLAANVSQSKSADALDEMSWREFEMLVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH EAFRLQGYRVVEMGGSGPDGGIDLVLSKGTEKFLVQCKQWKAFKVSVTVVRELYGVMAAK HHHHHCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHC GAAGGFVVTSGMFTEDATAFAAGRNITLIDGSRLLGLLAQAKAARRTVNEPPRRAFDAPV CCCCCEEEECCCCCCCHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHCCCCC PLPSATLACPACGAAMKKRVAKRGGNAGGEFWGCTQYPVCKGTRNVG CCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA