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The map label for this gene is cspA [C]

Identifier: 91789211

GI number: 91789211

Start: 3551411

End: 3551992

Strand: Reverse

Name: cspA [C]

Synonym: Bpro_3355

Alternate gene names: 91789211

Gene position: 3551992-3551411 (Counterclockwise)

Preceding gene: 91789212

Following gene: 91789209

Centisome position: 68.3

GC content: 55.33

Gene sequence:

>582_bases
GTGAGTAAATTGACCATGCGGTTTGATGGAACCCTCAAGAAGTGGAACGCTGAACGCGGTCTCGGCTTCATCGTTGCTGA
CCAAGGTGGGCAAGAGATCTTTGTTCATATCTCTGCTTTTCCGCGCGATGGCCGCTTGCCTGCCGTAGGTGAACCACTTT
CATTTGAAGTGGAACCCGACCGCGATGGAAAGAAGTGCGCCGTGCGGATACACCGGCGCGGGGCTTCCCAGCCAACAGCA
GCATATGCGGCCAGATCCAATGTGAGGCGATCTTCGAACGCTCCTTACAAGTCAGGCATTGGCGGCAGCTTGATCGCCAT
GGTCATCGTGGCGGCGTTGGGCTGGTACGGATACACCCAATACGCCAACCGGGTGGCGCAGAGCCAAGAGGCTCCTCAAA
GTGGTTTCGTGATGCCTGCGCCTGGTGGCTTTCAATGCGATGGCCGAAAATATTGCTCACAAATGACTTCGTGCAAAGAA
GCGAAGCTATTCCTGAGGAGTTGCCCAGGCGTTGAAATGGATGGCAATCATGATGGCGTGCCGTGTGAACAGCAGTGGTG
CACCAGTCCTTTCGCCAATTGA

Upstream 100 bases:

>100_bases
GCGCTCCACTTTGTAGGCAACGGCGGCGGGAGCACCTTCGCCTCTAGAATCTCGCGAACAAATACAAATAGAACTTAGCC
AGTGGTTAAGTGAAACGGGA

Downstream 100 bases:

>100_bases
ATGGGGTGAACCTCTTTTGCTAGCCATTTAGGCCTCTAGCCTTCGTGGGATCTATGCCAGAAGCTACAAAAAAATTCAGC
TTGCCGCCTTCACCGACTGC

Product: cold-shock DNA-binding protein family protein

Products: NA

Alternate protein names: Cold Shock Domain-Contain Protein; Cold-Shock Protein; Excalibur Domain Protein; Cold Shock Domain Family Protein; Cold Shock Domain-Containing Protein; Cold Shock Family Protein

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSKLTMRFDGTLKKWNAERGLGFIVADQGGQEIFVHISAFPRDGRLPAVGEPLSFEVEPDRDGKKCAVRIHRRGASQPTA
AYAARSNVRRSSNAPYKSGIGGSLIAMVIVAALGWYGYTQYANRVAQSQEAPQSGFVMPAPGGFQCDGRKYCSQMTSCKE
AKLFLRSCPGVEMDGNHDGVPCEQQWCTSPFAN

Sequences:

>Translated_193_residues
MSKLTMRFDGTLKKWNAERGLGFIVADQGGQEIFVHISAFPRDGRLPAVGEPLSFEVEPDRDGKKCAVRIHRRGASQPTA
AYAARSNVRRSSNAPYKSGIGGSLIAMVIVAALGWYGYTQYANRVAQSQEAPQSGFVMPAPGGFQCDGRKYCSQMTSCKE
AKLFLRSCPGVEMDGNHDGVPCEQQWCTSPFAN
>Mature_192_residues
SKLTMRFDGTLKKWNAERGLGFIVADQGGQEIFVHISAFPRDGRLPAVGEPLSFEVEPDRDGKKCAVRIHRRGASQPTAA
YAARSNVRRSSNAPYKSGIGGSLIAMVIVAALGWYGYTQYANRVAQSQEAPQSGFVMPAPGGFQCDGRKYCSQMTSCKEA
KLFLRSCPGVEMDGNHDGVPCEQQWCTSPFAN

Specific function: Binds To And Stimulates The Transcription Of The CCAAT- Containing, Cold-Shock-Inducible Promoters Of The H-Ns And Gyra Proteins. Binds Also To The Inverted Repeat 5'-ATTGG-3'. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21016; Mature: 20885

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLTMRFDGTLKKWNAERGLGFIVADQGGQEIFVHISAFPRDGRLPAVGEPLSFEVEPD
CCCEEEEECCCHHHCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCC
RDGKKCAVRIHRRGASQPTAAYAARSNVRRSSNAPYKSGIGGSLIAMVIVAALGWYGYTQ
CCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
YANRVAQSQEAPQSGFVMPAPGGFQCDGRKYCSQMTSCKEAKLFLRSCPGVEMDGNHDGV
HHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PCEQQWCTSPFAN
CCCHHHCCCCCCC
>Mature Secondary Structure 
SKLTMRFDGTLKKWNAERGLGFIVADQGGQEIFVHISAFPRDGRLPAVGEPLSFEVEPD
CCEEEEECCCHHHCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCC
RDGKKCAVRIHRRGASQPTAAYAARSNVRRSSNAPYKSGIGGSLIAMVIVAALGWYGYTQ
CCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
YANRVAQSQEAPQSGFVMPAPGGFQCDGRKYCSQMTSCKEAKLFLRSCPGVEMDGNHDGV
HHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PCEQQWCTSPFAN
CCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA