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The map label for this gene is yagI [H]

Identifier: 91789197

GI number: 91789197

Start: 3537995

End: 3538828

Strand: Reverse

Name: yagI [H]

Synonym: Bpro_3341

Alternate gene names: 91789197

Gene position: 3538828-3537995 (Counterclockwise)

Preceding gene: 91789198

Following gene: 91789192

Centisome position: 68.05

GC content: 64.75

Gene sequence:

>834_bases
ATGCCCGCTTCCCGACCACCTTCCGCTGTAACCAAGCCTGCCCTGGCCCAAGTGGCGGGCACGGCGTCGTTTTCGAAGTT
CATGCACGTGCTGCAGCTGGTGGCTGATTCGACCGAGCCGCTCAACGTCGCTGCGCTGATGCGGGCCAGCGGTTATCCGC
GCCCGACGGTGCATCGAATTGTTGCCGCCCTGCTGGCCGAGCGGCTGCTGGTCGAGAACACGCGCAGCGCGTCCCTTGCG
TTGGGCCCGCGGCTGATCCAGCTGGCCAGCCGCAGCTGGGGCCGTTCAGAACTCCGGCTGGCGGCGGTGGACGAACTCAA
GCGCCTGCGCGATATCACAGGGGAAACCGTCCACCTGGCGGTGCCCAACGGCACCACCATGGTGTACATCGAAAAGCTGG
AAAGTCCGAGCGCGGTGCGCATGGCCTCGCGCATAGGCACCAGCGTGTCGCTGCATTCCACGGCCGTCGGCAAGGCCTAC
ATGGCCGCACTGGACGCTGCCACGCTGAACCCATTGCTCGAGAATTTACCCATGCCGCGCTATACACCCAGCACGGTGAC
CGAGTTGGCGGATCTGCAGGCGCAACTGCGGGTTACGCGGGAGCGGGGCTGGTCGGTGGACAGCGAAGAAAACGAAGCCG
GTATTTTTTGTTTCGGCGCGGCCATCCTGGGCAGTCGCGGCGTGCCGGTGGCGGCGATCAGCGTCAGCACGCTGATCTTT
CGGCAGAAGGACAACCCCGAGCAGGCTTATGTGGCGCCACTGCTGGAGGCATGCCGTGCGATTTCGGCGCGGATTGCGGA
GACGCCAGAGCTTTCTGCTGCGGATATTTTGTAG

Upstream 100 bases:

>100_bases
CGGTCGACGGGGGCTACCTGGTGTCCTGATGAATTGCGGGCCGGGCCAGCAGGGATAATCCTTTTTTGCTCATCAGCCCT
CACCGCACATCGCCCTGCCC

Downstream 100 bases:

>100_bases
GGCGGCTTTTTGGGTTGGGGTAGTTGGTTTTGTTGAGGGGTGCTGGCCGGGGGTAGCCCGGCGGCTACTCACTTTTCTTT
TGCTTCGCCAAAAGAAAAGT

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MPASRPPSAVTKPALAQVAGTASFSKFMHVLQLVADSTEPLNVAALMRASGYPRPTVHRIVAALLAERLLVENTRSASLA
LGPRLIQLASRSWGRSELRLAAVDELKRLRDITGETVHLAVPNGTTMVYIEKLESPSAVRMASRIGTSVSLHSTAVGKAY
MAALDAATLNPLLENLPMPRYTPSTVTELADLQAQLRVTRERGWSVDSEENEAGIFCFGAAILGSRGVPVAAISVSTLIF
RQKDNPEQAYVAPLLEACRAISARIAETPELSAADIL

Sequences:

>Translated_277_residues
MPASRPPSAVTKPALAQVAGTASFSKFMHVLQLVADSTEPLNVAALMRASGYPRPTVHRIVAALLAERLLVENTRSASLA
LGPRLIQLASRSWGRSELRLAAVDELKRLRDITGETVHLAVPNGTTMVYIEKLESPSAVRMASRIGTSVSLHSTAVGKAY
MAALDAATLNPLLENLPMPRYTPSTVTELADLQAQLRVTRERGWSVDSEENEAGIFCFGAAILGSRGVPVAAISVSTLIF
RQKDNPEQAYVAPLLEACRAISARIAETPELSAADIL
>Mature_276_residues
PASRPPSAVTKPALAQVAGTASFSKFMHVLQLVADSTEPLNVAALMRASGYPRPTVHRIVAALLAERLLVENTRSASLAL
GPRLIQLASRSWGRSELRLAAVDELKRLRDITGETVHLAVPNGTTMVYIEKLESPSAVRMASRIGTSVSLHSTAVGKAYM
AALDAATLNPLLENLPMPRYTPSTVTELADLQAQLRVTRERGWSVDSEENEAGIFCFGAAILGSRGVPVAAISVSTLIFR
QKDNPEQAYVAPLLEACRAISARIAETPELSAADIL

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1786468, Length=240, Percent_Identity=31.6666666666667, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1788131, Length=245, Percent_Identity=30.2040816326531, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI87082359, Length=262, Percent_Identity=28.2442748091603, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1788581, Length=213, Percent_Identity=29.1079812206573, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1786715, Length=217, Percent_Identity=27.6497695852535, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1790752, Length=192, Percent_Identity=27.0833333333333, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1789999, Length=256, Percent_Identity=26.171875, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 29619; Mature: 29488

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASRPPSAVTKPALAQVAGTASFSKFMHVLQLVADSTEPLNVAALMRASGYPRPTVHRI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHH
VAALLAERLLVENTRSASLALGPRLIQLASRSWGRSELRLAAVDELKRLRDITGETVHLA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
VPNGTTMVYIEKLESPSAVRMASRIGTSVSLHSTAVGKAYMAALDAATLNPLLENLPMPR
CCCCCEEEEEEECCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YTPSTVTELADLQAQLRVTRERGWSVDSEENEAGIFCFGAAILGSRGVPVAAISVSTLIF
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHCCCCCCEEHHHHHHHEE
RQKDNPEQAYVAPLLEACRAISARIAETPELSAADIL
ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCC
>Mature Secondary Structure 
PASRPPSAVTKPALAQVAGTASFSKFMHVLQLVADSTEPLNVAALMRASGYPRPTVHRI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHH
VAALLAERLLVENTRSASLALGPRLIQLASRSWGRSELRLAAVDELKRLRDITGETVHLA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
VPNGTTMVYIEKLESPSAVRMASRIGTSVSLHSTAVGKAYMAALDAATLNPLLENLPMPR
CCCCCEEEEEEECCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YTPSTVTELADLQAQLRVTRERGWSVDSEENEAGIFCFGAAILGSRGVPVAAISVSTLIF
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHCCCCCCEEHHHHHHHEE
RQKDNPEQAYVAPLLEACRAISARIAETPELSAADIL
ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]