| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789134
Identifier: 91789134
GI number: 91789134
Start: 3465939
End: 3467723
Strand: Reverse
Name: 91789134
Synonym: Bpro_3274
Alternate gene names: NA
Gene position: 3467723-3465939 (Counterclockwise)
Preceding gene: 91789135
Following gene: 91789125
Centisome position: 66.68
GC content: 65.21
Gene sequence:
>1785_bases ATGGCATTTGACCTGGACATTGGCTTCGCAACGCTTGCGGGCCGCAAAGACAGCAACGAGGACTTCTGCGCGGCCATGCT GCCGGAGCCCGGCCGGGAGGGCATGGGGTCCATCGTCGCGATTGCCGACGGTGTGAGCACCGGCGGCATGGGTAAGGAGG CGGCACAAACCACCGTCACCAGCCTGGTACGCGATTACTACGGTACGCCTGAAACCTGGGAAACCACGGTGGCGTTGGAC CGGATCATTGGCGCGCAGAACGCCTGGCTGGCGGGTCTGAACCGGCGCAGGCATCCGGCGATCGGCCTGACCACCCTGAC GGCAGTGGTGTTGCGGGGGCAGTCGTATTCACTGGCCCATGTCGGCGACACCCGCGCGTACCTGCTGCGTGCCGGGCATC TGATGCAGCTCACCAGCGACCATGTGGTCGATCACCCGGATTTCCGGCATCAGCTGCTGCGCTGCGTGGGCGCGGAAGAC CGCCTGGTGGTGGACTACTCCCAGGGTGACCTGCAGGTGGGCGATATTTTCGTGCTGCTGTCGGATGGGGTGCACAACGT ACTGTCGGGCAAGCGGCTCGATGCTCTGGTCCTGCCCGCCAGTATTCCCGGGCGTGCCGGAGACACCGGGGTTGACGCGA AAACCCTCAGCCAGCGGCTGGTCGATGCCGCGATGGCCGCAGGCACGACGGATAACGTCACCGCCCTGGTGGTGCGCGTG CTGGGCTTGCTCGATGCGAACCTGCAGGATGAAAACCGCCAGGCGCTGGCCTTGCCGGTGCCGCGGCGGCTCAAGGTCGG CAGCCTGCTGGATGGCCTGTCCGTGACCGCCGTCGTTGCAGACAACGGCGTCAACTTGCTCTATCAGGTACGGGATGTCG CGAGCCAGAAACTCTATGCGATCAAGACGCTGCACCCCGCACGGGCGCAGGATCCCGAGGAGCGCGCCATGCTGGCCCAC GAAGCCTGGCTGGCCAAGCGCATGCAGTCGTCCCGCGCGGCCGACCATCTGGTCAACCTGCATGACCATCCGCCGGGCGT CGAGGTAGCCAGCGCTTTTTACCTGCTCTACGACTGGCATGCCGGTGAAACACTTCAGCAGCAACTCGACCGCAAGCATG CCTTCAACCTGCCACAGGTCCTGACGGTGGCCACCCAGGCTGCGAAAGCCTTGGGCCGCCTGCACCGCCAGAGCGTGATC CACCGTGACATCAAGCCCGCCAACCTGCACCAGGGTGAGGACGGCATTCTTCGGGTGCTTGATCTGGGGGTTGCCCTGAC GGGCCGCGAGCCCGAGGCCATGCGCCAGCTGCATGCAGGCACACCCAGCTACATCAATCCCGAGCAATGGGGCTTTGGGG TCAAGCCCGGCGGCGCTGGCGGCGACATCGCGCAAGAGCTGCCCGATGCGCAAAGCGACCTGTTCGCGCTCGGCGTGACG CTGTACCAGCTGCTGACCGGCAAGCTGCCGTACGGTGAGGTGCTGCCCTACCAGGCAGGGCGCTATTACCACGACCCGAT CCCGCCAAGCCGCCACAACCCCGAGGTGCCGATCTGGCTGGATCATGTCGTGTTGAAGGCCGTGGCGCGCGACAAGCGCC AGCGATTTGAAACGGCCGAGGAACTGCTGCTGGCGCTGGAGCGGGGCGCCTCACGGCCGCTAACGGCGCCGCCGGCTACG CCTTTGATCCAGCGCGATCCCGCGGCCTTATGGAAGTTGGCGTTGGGGGTCAGTGTGCTATTCAATCTTTTGCTGGTTTA CTGGTTGCTGTTTTTGCCAAGGTAG
Upstream 100 bases:
>100_bases GGTGCATTACGAGCGCAGCATGCAGATGTTGGTGGGGTAACGGGCATGTTTTATATTGCAGTGCACCAAATTCGGGCATG GGACTTGCTTATGTTGGTGC
Downstream 100 bases:
>100_bases CGTTCTTCTTTGGAGTTTCAGCTGTTTGTCCCTGTAGGATGGGTGCGGATAGCTACTGAATTGATCGTGTAGGGGACTTG CGGAGGATTGAGGCCGGGGG
Product: protein serine/threonine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 594; Mature: 593
Protein sequence:
>594_residues MAFDLDIGFATLAGRKDSNEDFCAAMLPEPGREGMGSIVAIADGVSTGGMGKEAAQTTVTSLVRDYYGTPETWETTVALD RIIGAQNAWLAGLNRRRHPAIGLTTLTAVVLRGQSYSLAHVGDTRAYLLRAGHLMQLTSDHVVDHPDFRHQLLRCVGAED RLVVDYSQGDLQVGDIFVLLSDGVHNVLSGKRLDALVLPASIPGRAGDTGVDAKTLSQRLVDAAMAAGTTDNVTALVVRV LGLLDANLQDENRQALALPVPRRLKVGSLLDGLSVTAVVADNGVNLLYQVRDVASQKLYAIKTLHPARAQDPEERAMLAH EAWLAKRMQSSRAADHLVNLHDHPPGVEVASAFYLLYDWHAGETLQQQLDRKHAFNLPQVLTVATQAAKALGRLHRQSVI HRDIKPANLHQGEDGILRVLDLGVALTGREPEAMRQLHAGTPSYINPEQWGFGVKPGGAGGDIAQELPDAQSDLFALGVT LYQLLTGKLPYGEVLPYQAGRYYHDPIPPSRHNPEVPIWLDHVVLKAVARDKRQRFETAEELLLALERGASRPLTAPPAT PLIQRDPAALWKLALGVSVLFNLLLVYWLLFLPR
Sequences:
>Translated_594_residues MAFDLDIGFATLAGRKDSNEDFCAAMLPEPGREGMGSIVAIADGVSTGGMGKEAAQTTVTSLVRDYYGTPETWETTVALD RIIGAQNAWLAGLNRRRHPAIGLTTLTAVVLRGQSYSLAHVGDTRAYLLRAGHLMQLTSDHVVDHPDFRHQLLRCVGAED RLVVDYSQGDLQVGDIFVLLSDGVHNVLSGKRLDALVLPASIPGRAGDTGVDAKTLSQRLVDAAMAAGTTDNVTALVVRV LGLLDANLQDENRQALALPVPRRLKVGSLLDGLSVTAVVADNGVNLLYQVRDVASQKLYAIKTLHPARAQDPEERAMLAH EAWLAKRMQSSRAADHLVNLHDHPPGVEVASAFYLLYDWHAGETLQQQLDRKHAFNLPQVLTVATQAAKALGRLHRQSVI HRDIKPANLHQGEDGILRVLDLGVALTGREPEAMRQLHAGTPSYINPEQWGFGVKPGGAGGDIAQELPDAQSDLFALGVT LYQLLTGKLPYGEVLPYQAGRYYHDPIPPSRHNPEVPIWLDHVVLKAVARDKRQRFETAEELLLALERGASRPLTAPPAT PLIQRDPAALWKLALGVSVLFNLLLVYWLLFLPR >Mature_593_residues AFDLDIGFATLAGRKDSNEDFCAAMLPEPGREGMGSIVAIADGVSTGGMGKEAAQTTVTSLVRDYYGTPETWETTVALDR IIGAQNAWLAGLNRRRHPAIGLTTLTAVVLRGQSYSLAHVGDTRAYLLRAGHLMQLTSDHVVDHPDFRHQLLRCVGAEDR LVVDYSQGDLQVGDIFVLLSDGVHNVLSGKRLDALVLPASIPGRAGDTGVDAKTLSQRLVDAAMAAGTTDNVTALVVRVL GLLDANLQDENRQALALPVPRRLKVGSLLDGLSVTAVVADNGVNLLYQVRDVASQKLYAIKTLHPARAQDPEERAMLAHE AWLAKRMQSSRAADHLVNLHDHPPGVEVASAFYLLYDWHAGETLQQQLDRKHAFNLPQVLTVATQAAKALGRLHRQSVIH RDIKPANLHQGEDGILRVLDLGVALTGREPEAMRQLHAGTPSYINPEQWGFGVKPGGAGGDIAQELPDAQSDLFALGVTL YQLLTGKLPYGEVLPYQAGRYYHDPIPPSRHNPEVPIWLDHVVLKAVARDKRQRFETAEELLLALERGASRPLTAPPATP LIQRDPAALWKLALGVSVLFNLLLVYWLLFLPR
Specific function: Unknown
COG id: COG0515
COG function: function code RTKL; Serine/threonine protein kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI93004081, Length=214, Percent_Identity=26.1682242990654, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI41872374, Length=217, Percent_Identity=25.3456221198157, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI38327572, Length=212, Percent_Identity=29.2452830188679, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI38327570, Length=212, Percent_Identity=29.2452830188679, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI38327568, Length=212, Percent_Identity=29.2452830188679, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI38327566, Length=212, Percent_Identity=29.2452830188679, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI38327564, Length=212, Percent_Identity=29.2452830188679, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI38327562, Length=212, Percent_Identity=29.2452830188679, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI225735561, Length=172, Percent_Identity=28.4883720930233, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI25168263, Length=203, Percent_Identity=27.5862068965517, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI20127541, Length=183, Percent_Identity=30.0546448087432, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI25168261, Length=183, Percent_Identity=30.0546448087432, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI219521876, Length=203, Percent_Identity=27.5862068965517, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI148539879, Length=236, Percent_Identity=26.6949152542373, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI219521880, Length=203, Percent_Identity=27.5862068965517, Blast_Score=73, Evalue=9e-13, Organism=Homo sapiens, GI148539876, Length=236, Percent_Identity=26.271186440678, Blast_Score=73, Evalue=9e-13, Organism=Homo sapiens, GI219521878, Length=203, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI55953117, Length=223, Percent_Identity=27.3542600896861, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI27437011, Length=140, Percent_Identity=32.1428571428571, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI14150045, Length=140, Percent_Identity=32.1428571428571, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI4506737, Length=223, Percent_Identity=24.6636771300448, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI148806859, Length=146, Percent_Identity=30.8219178082192, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI4759050, Length=278, Percent_Identity=23.7410071942446, Blast_Score=66, Evalue=7e-11, Organism=Homo sapiens, GI62865639, Length=242, Percent_Identity=24.7933884297521, Blast_Score=66, Evalue=7e-11, Organism=Homo sapiens, GI62865641, Length=242, Percent_Identity=24.7933884297521, Blast_Score=66, Evalue=8e-11, Organism=Caenorhabditis elegans, GI115533552, Length=282, Percent_Identity=26.5957446808511, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI115533550, Length=282, Percent_Identity=26.5957446808511, Blast_Score=83, Evalue=5e-16, Organism=Caenorhabditis elegans, GI32564603, Length=224, Percent_Identity=25, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17505246, Length=156, Percent_Identity=32.0512820512821, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71989911, Length=220, Percent_Identity=26.8181818181818, Blast_Score=66, Evalue=5e-11, Organism=Caenorhabditis elegans, GI71989893, Length=214, Percent_Identity=26.6355140186916, Blast_Score=66, Evalue=5e-11, Organism=Caenorhabditis elegans, GI193203107, Length=214, Percent_Identity=26.6355140186916, Blast_Score=66, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71989905, Length=214, Percent_Identity=26.6355140186916, Blast_Score=66, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71989900, Length=214, Percent_Identity=26.6355140186916, Blast_Score=66, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6323643, Length=220, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6325117, Length=231, Percent_Identity=23.3766233766234, Blast_Score=73, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6321894, Length=270, Percent_Identity=25.9259259259259, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6319502, Length=260, Percent_Identity=26.1538461538462, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324805, Length=285, Percent_Identity=21.4035087719298, Blast_Score=69, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6320731, Length=243, Percent_Identity=23.0452674897119, Blast_Score=68, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6325053, Length=213, Percent_Identity=24.4131455399061, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI116007484, Length=237, Percent_Identity=24.0506329113924, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI281360155, Length=237, Percent_Identity=24.0506329113924, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24642565, Length=181, Percent_Identity=30.3867403314917, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI17136516, Length=234, Percent_Identity=26.0683760683761, Blast_Score=67, Evalue=5e-11, Organism=Drosophila melanogaster, GI116007692, Length=202, Percent_Identity=24.7524752475248, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI116007688, Length=202, Percent_Identity=24.7524752475248, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI18858209, Length=233, Percent_Identity=24.8927038626609, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI24653760, Length=202, Percent_Identity=24.7524752475248, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI116007694, Length=202, Percent_Identity=24.7524752475248, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI116007686, Length=202, Percent_Identity=24.7524752475248, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI116007690, Length=202, Percent_Identity=24.7524752475248, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI19922606, Length=176, Percent_Identity=30.1136363636364, Blast_Score=66, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR005543 - InterPro: IPR000719 - InterPro: IPR017441 - InterPro: IPR017442 - InterPro: IPR008271 - InterPro: IPR002290 [H]
Pfam domain/function: PF03793 PASTA; PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 64664; Mature: 64533
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFDLDIGFATLAGRKDSNEDFCAAMLPEPGREGMGSIVAIADGVSTGGMGKEAAQTTVT CEEEECCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH SLVRDYYGTPETWETTVALDRIIGAQNAWLAGLNRRRHPAIGLTTLTAVVLRGQSYSLAH HHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEE VGDTRAYLLRAGHLMQLTSDHVVDHPDFRHQLLRCVGAEDRLVVDYSQGDLQVGDIFVLL CCCHHHHHHHCCHHHEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEECEEEEEE SDGVHNVLSGKRLDALVLPASIPGRAGDTGVDAKTLSQRLVDAAMAAGTTDNVTALVVRV CCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH LGLLDANLQDENRQALALPVPRRLKVGSLLDGLSVTAVVADNGVNLLYQVRDVASQKLYA HHHHCCCCCCCCCCEEECCCCCCCCHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHEEH IKTLHPARAQDPEERAMLAHEAWLAKRMQSSRAADHLVNLHDHPPGVEVASAFYLLYDWH HEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEECC AGETLQQQLDRKHAFNLPQVLTVATQAAKALGRLHRQSVIHRDIKPANLHQGEDGILRVL CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH DLGVALTGREPEAMRQLHAGTPSYINPEQWGFGVKPGGAGGDIAQELPDAQSDLFALGVT HHCEEECCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHH LYQLLTGKLPYGEVLPYQAGRYYHDPIPPSRHNPEVPIWLDHVVLKAVARDKRQRFETAE HHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ELLLALERGASRPLTAPPATPLIQRDPAALWKLALGVSVLFNLLLVYWLLFLPR HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AFDLDIGFATLAGRKDSNEDFCAAMLPEPGREGMGSIVAIADGVSTGGMGKEAAQTTVT EEEECCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH SLVRDYYGTPETWETTVALDRIIGAQNAWLAGLNRRRHPAIGLTTLTAVVLRGQSYSLAH HHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEE VGDTRAYLLRAGHLMQLTSDHVVDHPDFRHQLLRCVGAEDRLVVDYSQGDLQVGDIFVLL CCCHHHHHHHCCHHHEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEECEEEEEE SDGVHNVLSGKRLDALVLPASIPGRAGDTGVDAKTLSQRLVDAAMAAGTTDNVTALVVRV CCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH LGLLDANLQDENRQALALPVPRRLKVGSLLDGLSVTAVVADNGVNLLYQVRDVASQKLYA HHHHCCCCCCCCCCEEECCCCCCCCHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHEEH IKTLHPARAQDPEERAMLAHEAWLAKRMQSSRAADHLVNLHDHPPGVEVASAFYLLYDWH HEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEECC AGETLQQQLDRKHAFNLPQVLTVATQAAKALGRLHRQSVIHRDIKPANLHQGEDGILRVL CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH DLGVALTGREPEAMRQLHAGTPSYINPEQWGFGVKPGGAGGDIAQELPDAQSDLFALGVT HHCEEECCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHH LYQLLTGKLPYGEVLPYQAGRYYHDPIPPSRHNPEVPIWLDHVVLKAVARDKRQRFETAE HHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ELLLALERGASRPLTAPPATPLIQRDPAALWKLALGVSVLFNLLLVYWLLFLPR HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]