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The map label for this gene is nuoC

Identifier: 91789114

GI number: 91789114

Start: 3445604

End: 3446215

Strand: Reverse

Name: nuoC

Synonym: Bpro_3254

Alternate gene names: 91789114

Gene position: 3446215-3445604 (Counterclockwise)

Preceding gene: 91789115

Following gene: 91789113

Centisome position: 66.27

GC content: 60.13

Gene sequence:

>612_bases
ATGCTGTCCTCGTTTCCCGTTTCCGCCACGCAGCTTGGCGACACCATCGCGGCGGTGCTCGGCGACAAGGTCAAGAGCCT
GAAGATCGCGCTGGGTGAGGTGACCGTGACGGTCGGCGCCGCCGATTACCTCGCGTCGGCCGTTCTGTTGCGCGATGCCG
CAGGCTGCCGCTTCGAGCAGCTGATCGACCTGTGCGGCCTGGACTACTCCGAATACAAGGATGGCCAATACGATGGCCTG
CGCTACTGCGTTGCCTCGCATCTGCTGTCGGTCAGCCTGAACCAGCGCGTGCGGCTCAAGGTGTTTTGCCCTGATGACGA
TTTCCCGGTCGTTGACTCAGTGAATGGTGTGTGGAACTCGGCCAACTGGTTCGAGCGTGAAGCGTTTGACCTCTACGGCA
TCATCTTTGAAGGCCATAACGATCTGCGCCGCATCCTGACCGACTACGGTTTCATCGGCCATCCTTTCCGCAAGGATTTC
CCGACCACGGGCTACGTGGAAATGCGCTATGACGCCGAGCAAAAGCGCGTGATTTACCAGCCGGTCACCATCGAGCCCCG
CGAGATCACGCCTCGCGTGATTCGTGAGGACAACTACGGTGGCCTTCAATGA

Upstream 100 bases:

>100_bases
TCTATGTGCCGGGCTGCCCGCCCACCGCCGAAGCGCTGTTGTACGGCATCATCCAGTTGCAGCAGAAAATCCGCCGCACC
AACACGATCGCGAGGGCCTG

Downstream 100 bases:

>100_bases
GCCCCCACGCTCGTCACTGCGTGAGCCTGCGGCAGTTCGCTGCCCCTTGCACTAAAGAGTGGGGCGCTGCCTTGCTTGGG
GCGGCCCGGCGCGGCAGCAT

Product: NADH (or F420H2) dehydrogenase subunit C

Products: NA

Alternate protein names: NADH dehydrogenase I subunit C; NDH-1 subunit C

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MLSSFPVSATQLGDTIAAVLGDKVKSLKIALGEVTVTVGAADYLASAVLLRDAAGCRFEQLIDLCGLDYSEYKDGQYDGL
RYCVASHLLSVSLNQRVRLKVFCPDDDFPVVDSVNGVWNSANWFEREAFDLYGIIFEGHNDLRRILTDYGFIGHPFRKDF
PTTGYVEMRYDAEQKRVIYQPVTIEPREITPRVIREDNYGGLQ

Sequences:

>Translated_203_residues
MLSSFPVSATQLGDTIAAVLGDKVKSLKIALGEVTVTVGAADYLASAVLLRDAAGCRFEQLIDLCGLDYSEYKDGQYDGL
RYCVASHLLSVSLNQRVRLKVFCPDDDFPVVDSVNGVWNSANWFEREAFDLYGIIFEGHNDLRRILTDYGFIGHPFRKDF
PTTGYVEMRYDAEQKRVIYQPVTIEPREITPRVIREDNYGGLQ
>Mature_203_residues
MLSSFPVSATQLGDTIAAVLGDKVKSLKIALGEVTVTVGAADYLASAVLLRDAAGCRFEQLIDLCGLDYSEYKDGQYDGL
RYCVASHLLSVSLNQRVRLKVFCPDDDFPVVDSVNGVWNSANWFEREAFDLYGIIFEGHNDLRRILTDYGFIGHPFRKDF
PTTGYVEMRYDAEQKRVIYQPVTIEPREITPRVIREDNYGGLQ

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0852

COG function: function code C; NADH:ubiquinone oxidoreductase 27 kD subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I 30 kDa subunit family

Homologues:

Organism=Homo sapiens, GI4758788, Length=176, Percent_Identity=38.6363636363636, Blast_Score=141, Evalue=3e-34,
Organism=Escherichia coli, GI145693162, Length=133, Percent_Identity=34.5864661654135, Blast_Score=79, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32563621, Length=172, Percent_Identity=39.5348837209302, Blast_Score=128, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71990788, Length=172, Percent_Identity=39.5348837209302, Blast_Score=127, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24656494, Length=176, Percent_Identity=39.2045454545455, Blast_Score=134, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NUOC_POLSJ (Q127X4)

Other databases:

- EMBL:   CP000316
- RefSeq:   YP_550066.1
- ProteinModelPortal:   Q127X4
- SMR:   Q127X4
- STRING:   Q127X4
- GeneID:   4014062
- GenomeReviews:   CP000316_GR
- KEGG:   pol:Bpro_3254
- NMPDR:   fig|296591.1.peg.1194
- eggNOG:   COG0852
- HOGENOM:   HBG727675
- OMA:   DFPVSGH
- ProtClustDB:   CLSK723585
- BioCyc:   PSP296591:BPRO_3254-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_01357
- InterPro:   IPR010218
- InterPro:   IPR001268
- InterPro:   IPR020396
- ProDom:   PD001581
- TIGRFAMs:   TIGR01961

Pfam domain/function: PF00329 Complex1_30kDa

EC number: =1.6.99.5

Molecular weight: Translated: 22845; Mature: 22845

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00542 COMPLEX1_30K

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSFPVSATQLGDTIAAVLGDKVKSLKIALGEVTVTVGAADYLASAVLLRDAAGCRFEQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECEEEEEECCHHHHHHHHHHHHCCCCCHHH
LIDLCGLDYSEYKDGQYDGLRYCVASHLLSVSLNQRVRLKVFCPDDDFPVVDSVNGVWNS
HHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHCCCCCCCCC
ANWFEREAFDLYGIIFEGHNDLRRILTDYGFIGHPFRKDFPTTGYVEMRYDAEQKRVIYQ
CCHHHHHHHEEEEEEEECCHHHHHHHHHCCCCCCCHHCCCCCCCEEEEEECCCCCEEEEC
PVTIEPREITPRVIREDNYGGLQ
CCCCCCHHCCHHHEECCCCCCCC
>Mature Secondary Structure
MLSSFPVSATQLGDTIAAVLGDKVKSLKIALGEVTVTVGAADYLASAVLLRDAAGCRFEQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECEEEEEECCHHHHHHHHHHHHCCCCCHHH
LIDLCGLDYSEYKDGQYDGLRYCVASHLLSVSLNQRVRLKVFCPDDDFPVVDSVNGVWNS
HHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHCCCCCCCCC
ANWFEREAFDLYGIIFEGHNDLRRILTDYGFIGHPFRKDFPTTGYVEMRYDAEQKRVIYQ
CCHHHHHHHEEEEEEEECCHHHHHHHHHCCCCCCCHHCCCCCCCEEEEEECCCCCEEEEC
PVTIEPREITPRVIREDNYGGLQ
CCCCCCHHCCHHHEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA