| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789060
Identifier: 91789060
GI number: 91789060
Start: 3384876
End: 3385100
Strand: Direct
Name: 91789060
Synonym: Bpro_3200
Alternate gene names: NA
Gene position: 3384876-3385100 (Clockwise)
Preceding gene: 91789059
Following gene: 91789063
Centisome position: 65.09
GC content: 61.78
Gene sequence:
>225_bases ATGAATGCGAAACTGAATGCCAAATTCCTGATGGCCGCCGTGGCTGCCTCCATGATCTCCCTGACCGGTTGCGGAACCCC CACCAGGACGCAAATTGGTACTGCCACGGGTGCAGTGGTCGGCGGCGTTGCCGGTAGTGCCGTGAGTGGCGGAAGCACGA TCGGAACAGTGGGCGGTGCTGCCGCAGGTGCGTTGATCGGTCACGAGCTCAGCAAAGGCCGCTAA
Upstream 100 bases:
>100_bases CAGTGGGAATACAGGCAAAGGCCCCCAAAGGCCAAAAAAGGCCCAAAAAAAACTGTCCGGGATGGGGAAAGCCTGAAACT CTTAAGGAGAGGTAGCCCCC
Downstream 100 bases:
>100_bases ATAACAAGCTAACAAGCCGTTGCCCCGCTGACACGCTGTTGCGGGGTAAGCCGGCCCGCCCGCAAGCACCTGATGAACGG GGCAGATGGGCGGGCCAGTT
Product: 17 kDa surface antigen
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MNAKLNAKFLMAAVAASMISLTGCGTPTRTQIGTATGAVVGGVAGSAVSGGSTIGTVGGAAAGALIGHELSKGR
Sequences:
>Translated_74_residues MNAKLNAKFLMAAVAASMISLTGCGTPTRTQIGTATGAVVGGVAGSAVSGGSTIGTVGGAAAGALIGHELSKGR >Mature_74_residues MNAKLNAKFLMAAVAASMISLTGCGTPTRTQIGTATGAVVGGVAGSAVSGGSTIGTVGGAAAGALIGHELSKGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6874; Mature: 6874
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAKLNAKFLMAAVAASMISLTGCGTPTRTQIGTATGAVVGGVAGSAVSGGSTIGTVGGA CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCH AAGALIGHELSKGR HHHHHHHHHCCCCC >Mature Secondary Structure MNAKLNAKFLMAAVAASMISLTGCGTPTRTQIGTATGAVVGGVAGSAVSGGSTIGTVGGA CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCH AAGALIGHELSKGR HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA