Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91789026

Identifier: 91789026

GI number: 91789026

Start: 3351691

End: 3352728

Strand: Direct

Name: 91789026

Synonym: Bpro_3166

Alternate gene names: NA

Gene position: 3351691-3352728 (Clockwise)

Preceding gene: 91789022

Following gene: 91789027

Centisome position: 64.45

GC content: 60.5

Gene sequence:

>1038_bases
ATGAATATAAGGGGTATCCGCTTAGCTCCAGTGGAGTCGGATATACTGGATAAATACCCAGTTATTATGCCAGTTCCAGC
CCAAGACTACCCCCGCACCTGGAGCGAATTCCTCGATTGGTTTTCCTCCGAGGAGGCTTGCCTGTCTTACCTGGAGCGCT
TGCGCTGGCCGCACGGCTTCGCCTGCCCAAATTGCGCCAGCATGGCGGCGCCATACCGATCCAGCCGCACGCGATTGATG
TGCCAGGACTGTGGGCGACAGACGACCGTGACCTCGGGCACCATCTTTGACAAGACCCGTACGCCGCTAAAGGTATGGCT
GGCGGCGGCGTGGTATCTCACCAGCCAGAAGCAAGGTGTCAGCGCCCTAGGCTTGCAGCGGGTGTTGGGGCTGGGCAGCT
ACCAGACGGCCTGGACCATGCTGCACCGCTTTCGCTGTGCCATGGTGCGCCCGGATCGGGAACGCCTGAAAGGTCTGGTC
GAGGTGGATGAAACCTACCTGGCCATCTCGGACCGACAGCAGCCCATCTCTGCCGTGGGTCGCAAGAGCCGCACCAGCAA
AGTACTGGTGGTGATGGCCGTGGAGATACTGCAGCCCAAAGGATTTGGCCGGATTCGTCTGCACCGCATCGCCAATGATT
CTGACGAATGCGTGGTGCCGTTTGTCCAGCAGTCGGTGGAGCCCGGCGCCCAGATTCGCACTGACGGCTCGGCCGCCTAT
CGTTCGCTCAGCGAGCTGGGCTATGACCATGAGCGCACGGTCATGCTGGGCTCGGATGTTCCTGCCCATGTCTCCATGGC
AGGGGTGCATCGGGTGGCCTCACTGGTCAAGCGCTGGATCCTGGGCACGCACCATGGCTCGGTCCAGCCCGAGCATCTGG
ATGCCTACCTGGATGAGTTTGTCTTTCGCTTCAATCGCCGCACTTCGGGCTCTCGCGGGATGCTGTTTTACCGGCTGCTG
CAGCAAGCCGTTGTCACGAAACCCGTGACCTATCAGGACATCACCCGAACAACACAGGACATGGTGGAATCGGTCTAG

Upstream 100 bases:

>100_bases
TGGAGCCTTCGGAATATTCGTTGCTTGCGGTAGATAGTTTGTCGGCCATGGCTGATGAGGAAATTGCGGCAATTGTAGAC
CGGGCCGCAAAAGTAACTGT

Downstream 100 bases:

>100_bases
TGGAGCTAAGCGGATACCCCTTATGAATATACAGCCATACTAACCGAACCCGCCGGGTCGAACGGTTCCGCCTCGCGGCG
CACCGCCCGGCCGCCAGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MNIRGIRLAPVESDILDKYPVIMPVPAQDYPRTWSEFLDWFSSEEACLSYLERLRWPHGFACPNCASMAAPYRSSRTRLM
CQDCGRQTTVTSGTIFDKTRTPLKVWLAAAWYLTSQKQGVSALGLQRVLGLGSYQTAWTMLHRFRCAMVRPDRERLKGLV
EVDETYLAISDRQQPISAVGRKSRTSKVLVVMAVEILQPKGFGRIRLHRIANDSDECVVPFVQQSVEPGAQIRTDGSAAY
RSLSELGYDHERTVMLGSDVPAHVSMAGVHRVASLVKRWILGTHHGSVQPEHLDAYLDEFVFRFNRRTSGSRGMLFYRLL
QQAVVTKPVTYQDITRTTQDMVESV

Sequences:

>Translated_345_residues
MNIRGIRLAPVESDILDKYPVIMPVPAQDYPRTWSEFLDWFSSEEACLSYLERLRWPHGFACPNCASMAAPYRSSRTRLM
CQDCGRQTTVTSGTIFDKTRTPLKVWLAAAWYLTSQKQGVSALGLQRVLGLGSYQTAWTMLHRFRCAMVRPDRERLKGLV
EVDETYLAISDRQQPISAVGRKSRTSKVLVVMAVEILQPKGFGRIRLHRIANDSDECVVPFVQQSVEPGAQIRTDGSAAY
RSLSELGYDHERTVMLGSDVPAHVSMAGVHRVASLVKRWILGTHHGSVQPEHLDAYLDEFVFRFNRRTSGSRGMLFYRLL
QQAVVTKPVTYQDITRTTQDMVESV
>Mature_345_residues
MNIRGIRLAPVESDILDKYPVIMPVPAQDYPRTWSEFLDWFSSEEACLSYLERLRWPHGFACPNCASMAAPYRSSRTRLM
CQDCGRQTTVTSGTIFDKTRTPLKVWLAAAWYLTSQKQGVSALGLQRVLGLGSYQTAWTMLHRFRCAMVRPDRERLKGLV
EVDETYLAISDRQQPISAVGRKSRTSKVLVVMAVEILQPKGFGRIRLHRIANDSDECVVPFVQQSVEPGAQIRTDGSAAY
RSLSELGYDHERTVMLGSDVPAHVSMAGVHRVASLVKRWILGTHHGSVQPEHLDAYLDEFVFRFNRRTSGSRGMLFYRLL
QQAVVTKPVTYQDITRTTQDMVESV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003220 [H]

Pfam domain/function: PF03811 Ins_element1 [H]

EC number: NA

Molecular weight: Translated: 39074; Mature: 39074

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRGIRLAPVESDILDKYPVIMPVPAQDYPRTWSEFLDWFSSEEACLSYLERLRWPHGF
CCCCCEEECCCCHHHHCCCCCEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCC
ACPNCASMAAPYRSSRTRLMCQDCGRQTTVTSGTIFDKTRTPLKVWLAAAWYLTSQKQGV
CCCCHHHHCCCCCCCCHHHHHHHCCCCEEECCCCEECCCCCHHHHHHHHHHHHHCCCCCH
SALGLQRVLGLGSYQTAWTMLHRFRCAMVRPDRERLKGLVEVDETYLAISDRQQPISAVG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHEEEECCCCCHHHHHC
RKSRTSKVLVVMAVEILQPKGFGRIRLHRIANDSDECVVPFVQQSVEPGAQIRTDGSAAY
CCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEHHHHHHCCCCCCEEECCHHHHH
RSLSELGYDHERTVMLGSDVPAHVSMAGVHRVASLVKRWILGTHHGSVQPEHLDAYLDEF
HHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VFRFNRRTSGSRGMLFYRLLQQAVVTKPVTYQDITRTTQDMVESV
HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIRGIRLAPVESDILDKYPVIMPVPAQDYPRTWSEFLDWFSSEEACLSYLERLRWPHGF
CCCCCEEECCCCHHHHCCCCCEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCC
ACPNCASMAAPYRSSRTRLMCQDCGRQTTVTSGTIFDKTRTPLKVWLAAAWYLTSQKQGV
CCCCHHHHCCCCCCCCHHHHHHHCCCCEEECCCCEECCCCCHHHHHHHHHHHHHCCCCCH
SALGLQRVLGLGSYQTAWTMLHRFRCAMVRPDRERLKGLVEVDETYLAISDRQQPISAVG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHEEEECCCCCHHHHHC
RKSRTSKVLVVMAVEILQPKGFGRIRLHRIANDSDECVVPFVQQSVEPGAQIRTDGSAAY
CCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEHHHHHHCCCCCCEEECCHHHHH
RSLSELGYDHERTVMLGSDVPAHVSMAGVHRVASLVKRWILGTHHGSVQPEHLDAYLDEF
HHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VFRFNRRTSGSRGMLFYRLLQQAVVTKPVTYQDITRTTQDMVESV
HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6306577; 9847077; 11016950 [H]