| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789021
Identifier: 91789021
GI number: 91789021
Start: 3344538
End: 3345488
Strand: Direct
Name: 91789021
Synonym: Bpro_3161
Alternate gene names: NA
Gene position: 3344538-3345488 (Clockwise)
Preceding gene: 91789020
Following gene: 91789022
Centisome position: 64.31
GC content: 65.19
Gene sequence:
>951_bases GTGCTGCTCCACGTCGTCCACGAAACCAGCTACCGCTATACACCTGCGGTTGAAAACGCACACCATGTGGTGCACCTCAA GCCGGCCAGCCGCGGCGGGCAAACGCTGCTGCACTACGCATTGCGCATCGATCCGGCCCCCGTTCAATTGCGCGAGACCG TGGACGTGTACGGCAATTCCCGCAGCTATTTTTCATTGCAGGCGGCGCATGACCGGCTGACGGTCGTGGCCGACAGCGTT GTCTCCACCTCGACGGCCAATCCGCTGCAGTCCCTCCTGTTCGCATCGCCAGGCGCGCGGGCCGACATGCCCTGGGAGCA GGTCCGCGACCAGTTCCGCTATCGCGCCGGAGCAGCCTACGACAGCGCCTCGGAGTTCCTGTTTGCCTCACCGTATGTGC CACTGAACGAGGCATTTACCGAGTTTGCGCGTCCGAGTTTCATGCCGGGCAGGCCACTGCCCGAGGCCGCGCGCGACCTC ATGACACGCATTCACACCACCATGACCTATGAGAGCGAAAGCACCGAGGTGAGCACGCCCGCTGTGGAGGCGCTTGAGCA GCGCAAGGGAGTGTGCCAGGATTTTGCGCACATCATGGTGGCCTGCTGCCGCGCCATGGGACTGCCGGCGCGTTACGTCA GCGGCTACCTGCTCACCACACCTCCGCCCGGCCAGCCGCGCCTGATTGGCAGCGACGCCTCGCATGCCTGGGCCTCGGTC TACTGCCCTGGCGTGGGCCAGTGGCTGGACTTTGACCCCACCAACAACCGGGCGCCAGGTGAGGACTACGTGACGCTGGC CACCGGCCGCGATTTTCTGGATGTGTCGCCCATGCGCGGCGTGATCCGGGGCGGCGCGCAGCACATCCTGGACGTAGCCG TCACGGTGAAACCGCTGACGCCCGATGAACTGCGCGCCATACAGGGCGACGCCATCCATCAGGCAGATTGA
Upstream 100 bases:
>100_bases TCAGCCACGCCGCATCGGGCAGCCAAAGCCTGGGCGCATAGGCCGCCCCCCCTTTCCCCCTTTCTCTCCTTTCCTTTCCG TTCCAACAAACCCCGATCCC
Downstream 100 bases:
>100_bases CCGCTGATCAGGGCCTGTTCACCCTACAACGGGAGTGCGTTTTAGGGTGAACAGGCCCTGGCCGGCTTCATCGGCATCCT GCGCTAAGATAAAAAAACAG
Product: transglutaminase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MLLHVVHETSYRYTPAVENAHHVVHLKPASRGGQTLLHYALRIDPAPVQLRETVDVYGNSRSYFSLQAAHDRLTVVADSV VSTSTANPLQSLLFASPGARADMPWEQVRDQFRYRAGAAYDSASEFLFASPYVPLNEAFTEFARPSFMPGRPLPEAARDL MTRIHTTMTYESESTEVSTPAVEALEQRKGVCQDFAHIMVACCRAMGLPARYVSGYLLTTPPPGQPRLIGSDASHAWASV YCPGVGQWLDFDPTNNRAPGEDYVTLATGRDFLDVSPMRGVIRGGAQHILDVAVTVKPLTPDELRAIQGDAIHQAD
Sequences:
>Translated_316_residues MLLHVVHETSYRYTPAVENAHHVVHLKPASRGGQTLLHYALRIDPAPVQLRETVDVYGNSRSYFSLQAAHDRLTVVADSV VSTSTANPLQSLLFASPGARADMPWEQVRDQFRYRAGAAYDSASEFLFASPYVPLNEAFTEFARPSFMPGRPLPEAARDL MTRIHTTMTYESESTEVSTPAVEALEQRKGVCQDFAHIMVACCRAMGLPARYVSGYLLTTPPPGQPRLIGSDASHAWASV YCPGVGQWLDFDPTNNRAPGEDYVTLATGRDFLDVSPMRGVIRGGAQHILDVAVTVKPLTPDELRAIQGDAIHQAD >Mature_316_residues MLLHVVHETSYRYTPAVENAHHVVHLKPASRGGQTLLHYALRIDPAPVQLRETVDVYGNSRSYFSLQAAHDRLTVVADSV VSTSTANPLQSLLFASPGARADMPWEQVRDQFRYRAGAAYDSASEFLFASPYVPLNEAFTEFARPSFMPGRPLPEAARDL MTRIHTTMTYESESTEVSTPAVEALEQRKGVCQDFAHIMVACCRAMGLPARYVSGYLLTTPPPGQPRLIGSDASHAWASV YCPGVGQWLDFDPTNNRAPGEDYVTLATGRDFLDVSPMRGVIRGGAQHILDVAVTVKPLTPDELRAIQGDAIHQAD
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML0607 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013589 - InterPro: IPR002931 [H]
Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 34693; Mature: 34693
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLHVVHETSYRYTPAVENAHHVVHLKPASRGGQTLLHYALRIDPAPVQLRETVDVYGNS CEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCC RSYFSLQAAHDRLTVVADSVVSTSTANPLQSLLFASPGARADMPWEQVRDQFRYRAGAAY CCEEEEEECCCEEEEEHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC DSASEFLFASPYVPLNEAFTEFARPSFMPGRPLPEAARDLMTRIHTTMTYESESTEVSTP CCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCH AVEALEQRKGVCQDFAHIMVACCRAMGLPARYVSGYLLTTPPPGQPRLIGSDASHAWASV HHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCEEEECCCCCCCEEECCCCCCCEEEE YCPGVGQWLDFDPTNNRAPGEDYVTLATGRDFLDVSPMRGVIRGGAQHILDVAVTVKPLT ECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCHHHHEEEEEEEECCC PDELRAIQGDAIHQAD HHHHHHHCCCCCCCCC >Mature Secondary Structure MLLHVVHETSYRYTPAVENAHHVVHLKPASRGGQTLLHYALRIDPAPVQLRETVDVYGNS CEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCC RSYFSLQAAHDRLTVVADSVVSTSTANPLQSLLFASPGARADMPWEQVRDQFRYRAGAAY CCEEEEEECCCEEEEEHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC DSASEFLFASPYVPLNEAFTEFARPSFMPGRPLPEAARDLMTRIHTTMTYESESTEVSTP CCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCH AVEALEQRKGVCQDFAHIMVACCRAMGLPARYVSGYLLTTPPPGQPRLIGSDASHAWASV HHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCEEEECCCCCCCEEECCCCCCCEEEE YCPGVGQWLDFDPTNNRAPGEDYVTLATGRDFLDVSPMRGVIRGGAQHILDVAVTVKPLT ECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCHHHHEEEEEEEECCC PDELRAIQGDAIHQAD HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]