BacMap

Definition	Polaromonas sp. JS666 chromosome, complete genome.
Accession	NC_007948
Length	5,200,264

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The map label for this gene is gabD [H]

Identifier: 91788777

GI number: 91788777

Start: 3080221

End: 3081699

Strand: Direct

Name: gabD [H]

Synonym: Bpro_2917

Alternate gene names: 91788777

Gene position: 3080221-3081699 (Clockwise)

Preceding gene: 91788776

Following gene: 91788778

Centisome position: 59.23

GC content: 63.42

Gene sequence:

>1479_bases
ATGGACATGAAAACCTCCCCCATCTCCCTTCTCAAAGACCCGAGCCTTTTCAAGACCGACGCCCTGATCAACGGCCAATG
GGTGGCGGGTGGCTCGCGTTTCGACGTCAACGACCCCTCCAATGGGCAAAAACTCGCCGACGTGGCGAACCTCGGGTCGC
AAGACGCCGAGGCGGCGATTGCCGCGGCCAACGCGGCCTGGCCCGCCTGGCGCAGCAAAACCGGCAAGGAGCGCCACGCC
ATTTTGATGAAGTGGTACCAGTTGCTGATGGCCAACCAGGAAGACCTGGGCCGCATCATGACCGCCGAGCAGGGCAAGCC
TTTTGCCGAGGCCAAGGGCGAAGTGGCCTATGGCGCGAGCTTTGTCGAGTGGTTTGCCGAAGAAGCCAAGCGCGTCAACG
GCGAGACCCTGCCCCAGTTTGACAACAACCGCCGCCTGATGGTCATCAAGCAGCCCATCGGTGTGTGCGCCGCCATCACA
CCATGGAACTTCCCGCTGGCCATGATCACCCGCAAGGTCGCCCCGGCCCTGGCCGCAGGCTGCCCGGTGGTCATCAAGCC
CGCCGAGCTCACGCCGCTGACCGCGCTGGCGGCCGCCGAACTGGCCGTGCGCGCCGGCATCCCGGCGGGTGTGCTCAATG
TGCTCACCGCCGACAGCGCCAACAGCATTGCGGTGGGCAAGGTGTTCTGCGCCAGCGACGTGGTGCGCCACATCAGCTTC
ACCGGCTCCACCGAAGTCGGCCGTATCCTGATGGCCCAGAGTGCCCCGTCCGTCAAGAAGCTCTCCCTGGAGCTGGGCGG
CAACGCACCCTTCATCGTGTTTGACGATGCAGACATTGACTCGGCTGTCGAAGGCGCGATGGCCAGCAAGTACCGCAACG
CCGGCCAGACCTGCGTCTGCGCCAACCGCATCTATGTGCAGGACGGTGTCTATGACCAGTTCGTCGAAAAATTCGCCGCC
AAGGTCAAGCTGCTCAAGGTCGGCAACGGTTTTGAAGACGGCGTGGTGCAAGGCCCGCTGATTGAAGACTCCGCCGTAGA
CAAGGTGCAGCGCCATGTGGCCGACGCCCTGGCCAAGGGTGGCAAACTGCAGGCAGGCGGCCACAAGCTGCAGGGCCAGT
TTTTCGAGCCGACCGTGATCTCTGAAGCTACTGCCGACATGCTCTGCGCCCGGGAGGAAACCTTTGGCCCGTTTGCGCCG
GTGTTCCGCTTCAAGGCCGAACAGGAAGCCATTGACGCGGCCAACAACACCGAGTTTGGCCTGGCCAGCTACTTCTACAG
CCGCGACATCGGCCGCATCTACCGTGTGGCAGAAGCACTGGAATATGGGATGGTCGGCATCAACGCCGGCGTGATCGCGA
CGGAACACGTGCCCTTTGGCGGCGTCAAGCAGTCGGGCCTGGGCCGCGAGGGCTCCAGCCACGGCATGGAAGAGTACGTG
GAGATGAAGTACCTGTGCCTCGGGGACATCCTCAAATAA

Upstream 100 bases:

>100_bases
CCCCCTGGGGCGTCGAAAAAGACCCGAAAAACCGTCTGACCTGAAACCGGTCAAAATCGTCCTATCACCCGACAACACCC
CTTTTGCAGGAAATTTACCC

Downstream 100 bases:

>100_bases
TCAAATAGTTAAATAGGAATAAGAAGGCGGCAAAGCGGCGGCTTGTGCGCCGCATTGGCCGCCCTGCAGGGCGGGGCCTG
CCTGCGGCCTTGAACCCCGG

Product: succinate semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MDMKTSPISLLKDPSLFKTDALINGQWVAGGSRFDVNDPSNGQKLADVANLGSQDAEAAIAAANAAWPAWRSKTGKERHA
ILMKWYQLLMANQEDLGRIMTAEQGKPFAEAKGEVAYGASFVEWFAEEAKRVNGETLPQFDNNRRLMVIKQPIGVCAAIT
PWNFPLAMITRKVAPALAAGCPVVIKPAELTPLTALAAAELAVRAGIPAGVLNVLTADSANSIAVGKVFCASDVVRHISF
TGSTEVGRILMAQSAPSVKKLSLELGGNAPFIVFDDADIDSAVEGAMASKYRNAGQTCVCANRIYVQDGVYDQFVEKFAA
KVKLLKVGNGFEDGVVQGPLIEDSAVDKVQRHVADALAKGGKLQAGGHKLQGQFFEPTVISEATADMLCAREETFGPFAP
VFRFKAEQEAIDAANNTEFGLASYFYSRDIGRIYRVAEALEYGMVGINAGVIATEHVPFGGVKQSGLGREGSSHGMEEYV
EMKYLCLGDILK

Sequences:

>Translated_492_residues
MDMKTSPISLLKDPSLFKTDALINGQWVAGGSRFDVNDPSNGQKLADVANLGSQDAEAAIAAANAAWPAWRSKTGKERHA
ILMKWYQLLMANQEDLGRIMTAEQGKPFAEAKGEVAYGASFVEWFAEEAKRVNGETLPQFDNNRRLMVIKQPIGVCAAIT
PWNFPLAMITRKVAPALAAGCPVVIKPAELTPLTALAAAELAVRAGIPAGVLNVLTADSANSIAVGKVFCASDVVRHISF
TGSTEVGRILMAQSAPSVKKLSLELGGNAPFIVFDDADIDSAVEGAMASKYRNAGQTCVCANRIYVQDGVYDQFVEKFAA
KVKLLKVGNGFEDGVVQGPLIEDSAVDKVQRHVADALAKGGKLQAGGHKLQGQFFEPTVISEATADMLCAREETFGPFAP
VFRFKAEQEAIDAANNTEFGLASYFYSRDIGRIYRVAEALEYGMVGINAGVIATEHVPFGGVKQSGLGREGSSHGMEEYV
EMKYLCLGDILK
>Mature_492_residues
MDMKTSPISLLKDPSLFKTDALINGQWVAGGSRFDVNDPSNGQKLADVANLGSQDAEAAIAAANAAWPAWRSKTGKERHA
ILMKWYQLLMANQEDLGRIMTAEQGKPFAEAKGEVAYGASFVEWFAEEAKRVNGETLPQFDNNRRLMVIKQPIGVCAAIT
PWNFPLAMITRKVAPALAAGCPVVIKPAELTPLTALAAAELAVRAGIPAGVLNVLTADSANSIAVGKVFCASDVVRHISF
TGSTEVGRILMAQSAPSVKKLSLELGGNAPFIVFDDADIDSAVEGAMASKYRNAGQTCVCANRIYVQDGVYDQFVEKFAA
KVKLLKVGNGFEDGVVQGPLIEDSAVDKVQRHVADALAKGGKLQAGGHKLQGQFFEPTVISEATADMLCAREETFGPFAP
VFRFKAEQEAIDAANNTEFGLASYFYSRDIGRIYRVAEALEYGMVGINAGVIATEHVPFGGVKQSGLGREGSSHGMEEYV
EMKYLCLGDILK

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=479, Percent_Identity=55.741127348643, Blast_Score=529, Evalue=1e-150,
Organism=Homo sapiens, GI25777721, Length=492, Percent_Identity=54.0650406504065, Blast_Score=518, Evalue=1e-147,
Organism=Homo sapiens, GI12007648, Length=481, Percent_Identity=34.9272349272349, Blast_Score=310, Evalue=2e-84,
Organism=Homo sapiens, GI153266822, Length=482, Percent_Identity=37.344398340249, Blast_Score=304, Evalue=1e-82,
Organism=Homo sapiens, GI21361176, Length=483, Percent_Identity=36.0248447204969, Blast_Score=304, Evalue=1e-82,
Organism=Homo sapiens, GI25777724, Length=502, Percent_Identity=36.6533864541833, Blast_Score=303, Evalue=2e-82,
Organism=Homo sapiens, GI25777730, Length=488, Percent_Identity=35.8606557377049, Blast_Score=300, Evalue=2e-81,
Organism=Homo sapiens, GI25777732, Length=490, Percent_Identity=34.2857142857143, Blast_Score=290, Evalue=2e-78,
Organism=Homo sapiens, GI21614513, Length=423, Percent_Identity=38.7706855791962, Blast_Score=287, Evalue=1e-77,
Organism=Homo sapiens, GI238814322, Length=480, Percent_Identity=35.2083333333333, Blast_Score=287, Evalue=2e-77,
Organism=Homo sapiens, GI115387104, Length=467, Percent_Identity=33.8329764453961, Blast_Score=285, Evalue=7e-77,
Organism=Homo sapiens, GI25777728, Length=420, Percent_Identity=39.0476190476191, Blast_Score=280, Evalue=2e-75,
Organism=Homo sapiens, GI25777726, Length=497, Percent_Identity=33.6016096579477, Blast_Score=265, Evalue=1e-70,
Organism=Homo sapiens, GI25952152, Length=473, Percent_Identity=32.3467230443975, Blast_Score=248, Evalue=1e-65,
Organism=Homo sapiens, GI310128093, Length=471, Percent_Identity=29.0870488322718, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI310128103, Length=473, Percent_Identity=28.7526427061311, Blast_Score=199, Evalue=6e-51,
Organism=Homo sapiens, GI188035924, Length=473, Percent_Identity=28.7526427061311, Blast_Score=199, Evalue=7e-51,
Organism=Homo sapiens, GI301500698, Length=270, Percent_Identity=37.4074074074074, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI11095441, Length=478, Percent_Identity=27.4058577405858, Blast_Score=192, Evalue=4e-49,
Organism=Homo sapiens, GI310128091, Length=471, Percent_Identity=27.8131634819533, Blast_Score=182, Evalue=7e-46,
Organism=Homo sapiens, GI223972651, Length=465, Percent_Identity=28.3870967741935, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI310128089, Length=333, Percent_Identity=29.7297297297297, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI310128097, Length=250, Percent_Identity=33.6, Blast_Score=139, Evalue=7e-33,
Organism=Homo sapiens, GI310128087, Length=471, Percent_Identity=25.9023354564756, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI73466520, Length=378, Percent_Identity=29.1005291005291, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI206597441, Length=433, Percent_Identity=28.6374133949192, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI206597439, Length=433, Percent_Identity=28.6374133949192, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI22907049, Length=433, Percent_Identity=28.6374133949192, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI4557303, Length=378, Percent_Identity=29.1005291005291, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI73695881, Length=331, Percent_Identity=28.7009063444109, Blast_Score=125, Evalue=6e-29,
Organism=Homo sapiens, GI73695879, Length=331, Percent_Identity=28.7009063444109, Blast_Score=125, Evalue=6e-29,
Organism=Homo sapiens, GI4502043, Length=420, Percent_Identity=26.9047619047619, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI238814371, Length=420, Percent_Identity=26.9047619047619, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI310128095, Length=303, Percent_Identity=29.7029702970297, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI71773324, Length=330, Percent_Identity=28.1818181818182, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI223972653, Length=465, Percent_Identity=24.9462365591398, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI25777736, Length=468, Percent_Identity=25.8547008547009, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI25777734, Length=468, Percent_Identity=25.8547008547009, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI238859541, Length=468, Percent_Identity=25.8547008547009, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI310128099, Length=235, Percent_Identity=25.9574468085106, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI310128101, Length=235, Percent_Identity=25.9574468085106, Blast_Score=78, Evalue=2e-14,
Organism=Escherichia coli, GI1789015, Length=482, Percent_Identity=60.1659751037344, Blast_Score=617, Evalue=1e-178,
Organism=Escherichia coli, GI1787715, Length=469, Percent_Identity=37.7398720682303, Blast_Score=295, Evalue=7e-81,
Organism=Escherichia coli, GI1787684, Length=470, Percent_Identity=34.0425531914894, Blast_Score=287, Evalue=1e-78,
Organism=Escherichia coli, GI87081896, Length=466, Percent_Identity=35.6223175965665, Blast_Score=281, Evalue=5e-77,
Organism=Escherichia coli, GI1786504, Length=463, Percent_Identity=34.341252699784, Blast_Score=265, Evalue=6e-72,
Organism=Escherichia coli, GI1787558, Length=473, Percent_Identity=32.5581395348837, Blast_Score=260, Evalue=1e-70,
Organism=Escherichia coli, GI87081926, Length=448, Percent_Identity=34.1517857142857, Blast_Score=249, Evalue=2e-67,
Organism=Escherichia coli, GI87082295, Length=486, Percent_Identity=32.5102880658436, Blast_Score=245, Evalue=6e-66,
Organism=Escherichia coli, GI1788042, Length=455, Percent_Identity=32.967032967033, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI1787250, Length=480, Percent_Identity=30.2083333333333, Blast_Score=161, Evalue=9e-41,
Organism=Escherichia coli, GI1787653, Length=455, Percent_Identity=24.1758241758242, Blast_Score=89, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17534119, Length=465, Percent_Identity=48.6021505376344, Blast_Score=436, Evalue=1e-122,
Organism=Caenorhabditis elegans, GI133930964, Length=484, Percent_Identity=35.5371900826446, Blast_Score=297, Evalue=7e-81,
Organism=Caenorhabditis elegans, GI17562198, Length=495, Percent_Identity=35.5555555555556, Blast_Score=291, Evalue=5e-79,
Organism=Caenorhabditis elegans, GI25144435, Length=483, Percent_Identity=35.1966873706004, Blast_Score=286, Evalue=1e-77,
Organism=Caenorhabditis elegans, GI25143874, Length=510, Percent_Identity=33.3333333333333, Blast_Score=268, Evalue=6e-72,
Organism=Caenorhabditis elegans, GI25143876, Length=501, Percent_Identity=33.7325349301397, Blast_Score=267, Evalue=1e-71,
Organism=Caenorhabditis elegans, GI32564736, Length=420, Percent_Identity=35.7142857142857, Blast_Score=263, Evalue=2e-70,
Organism=Caenorhabditis elegans, GI71995606, Length=463, Percent_Identity=33.4773218142549, Blast_Score=241, Evalue=4e-64,
Organism=Caenorhabditis elegans, GI115534176, Length=486, Percent_Identity=31.2757201646091, Blast_Score=221, Evalue=9e-58,
Organism=Caenorhabditis elegans, GI71995613, Length=405, Percent_Identity=33.0864197530864, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI17551164, Length=475, Percent_Identity=29.4736842105263, Blast_Score=207, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI71986308, Length=456, Percent_Identity=28.2894736842105, Blast_Score=174, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI17564084, Length=442, Percent_Identity=27.1493212669683, Blast_Score=141, Evalue=7e-34,
Organism=Caenorhabditis elegans, GI32566756, Length=344, Percent_Identity=29.6511627906977, Blast_Score=141, Evalue=7e-34,
Organism=Caenorhabditis elegans, GI25146394, Length=344, Percent_Identity=29.6511627906977, Blast_Score=141, Evalue=7e-34,
Organism=Caenorhabditis elegans, GI25146391, Length=344, Percent_Identity=29.6511627906977, Blast_Score=141, Evalue=9e-34,
Organism=Caenorhabditis elegans, GI17534447, Length=468, Percent_Identity=26.7094017094017, Blast_Score=112, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI115532534, Length=340, Percent_Identity=28.2352941176471, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI32564151, Length=425, Percent_Identity=26.5882352941176, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71990744, Length=310, Percent_Identity=26.7741935483871, Blast_Score=76, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6319478, Length=484, Percent_Identity=47.1074380165289, Blast_Score=471, Evalue=1e-133,
Organism=Saccharomyces cerevisiae, GI6320917, Length=470, Percent_Identity=38.2978723404255, Blast_Score=311, Evalue=1e-85,
Organism=Saccharomyces cerevisiae, GI6325196, Length=473, Percent_Identity=36.1522198731501, Blast_Score=292, Evalue=1e-79,
Organism=Saccharomyces cerevisiae, GI6324950, Length=475, Percent_Identity=33.8947368421053, Blast_Score=284, Evalue=2e-77,
Organism=Saccharomyces cerevisiae, GI6323821, Length=479, Percent_Identity=34.6555323590814, Blast_Score=265, Evalue=9e-72,
Organism=Saccharomyces cerevisiae, GI6323822, Length=479, Percent_Identity=33.8204592901879, Blast_Score=258, Evalue=1e-69,
Organism=Saccharomyces cerevisiae, GI6321828, Length=474, Percent_Identity=25.7383966244726, Blast_Score=169, Evalue=9e-43,
Organism=Saccharomyces cerevisiae, GI6321826, Length=522, Percent_Identity=25.2873563218391, Blast_Score=94, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6323757, Length=426, Percent_Identity=25.5868544600939, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI281362580, Length=484, Percent_Identity=52.0661157024793, Blast_Score=510, Evalue=1e-145,
Organism=Drosophila melanogaster, GI62472918, Length=484, Percent_Identity=52.0661157024793, Blast_Score=510, Evalue=1e-145,
Organism=Drosophila melanogaster, GI62472926, Length=484, Percent_Identity=52.0661157024793, Blast_Score=510, Evalue=1e-145,
Organism=Drosophila melanogaster, GI62472936, Length=484, Percent_Identity=52.0661157024793, Blast_Score=510, Evalue=1e-145,
Organism=Drosophila melanogaster, GI21356737, Length=484, Percent_Identity=52.0661157024793, Blast_Score=510, Evalue=1e-145,
Organism=Drosophila melanogaster, GI24650465, Length=477, Percent_Identity=39.4129979035639, Blast_Score=325, Evalue=3e-89,
Organism=Drosophila melanogaster, GI24585660, Length=478, Percent_Identity=35.5648535564854, Blast_Score=305, Evalue=4e-83,
Organism=Drosophila melanogaster, GI20129399, Length=480, Percent_Identity=35, Blast_Score=300, Evalue=2e-81,
Organism=Drosophila melanogaster, GI24666674, Length=485, Percent_Identity=29.8969072164948, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24638878, Length=480, Percent_Identity=25.4166666666667, Blast_Score=162, Evalue=7e-40,
Organism=Drosophila melanogaster, GI24638876, Length=480, Percent_Identity=25.4166666666667, Blast_Score=161, Evalue=7e-40,
Organism=Drosophila melanogaster, GI45552499, Length=355, Percent_Identity=28.4507042253521, Blast_Score=126, Evalue=3e-29,
Organism=Drosophila melanogaster, GI281360303, Length=355, Percent_Identity=28.4507042253521, Blast_Score=126, Evalue=4e-29,
Organism=Drosophila melanogaster, GI281360301, Length=355, Percent_Identity=28.4507042253521, Blast_Score=125, Evalue=6e-29,
Organism=Drosophila melanogaster, GI281360299, Length=355, Percent_Identity=28.4507042253521, Blast_Score=125, Evalue=6e-29,
Organism=Drosophila melanogaster, GI281360297, Length=355, Percent_Identity=28.4507042253521, Blast_Score=125, Evalue=6e-29,
Organism=Drosophila melanogaster, GI281360295, Length=355, Percent_Identity=28.4507042253521, Blast_Score=125, Evalue=6e-29,
Organism=Drosophila melanogaster, GI24586250, Length=355, Percent_Identity=28.4507042253521, Blast_Score=125, Evalue=6e-29,
Organism=Drosophila melanogaster, GI24668425, Length=472, Percent_Identity=24.364406779661, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24668417, Length=472, Percent_Identity=24.364406779661, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24668413, Length=472, Percent_Identity=24.364406779661, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI28571802, Length=402, Percent_Identity=22.8855721393035, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28571800, Length=402, Percent_Identity=22.8855721393035, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28571806, Length=402, Percent_Identity=22.8855721393035, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28571798, Length=402, Percent_Identity=22.8855721393035, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28571796, Length=402, Percent_Identity=22.8855721393035, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28571794, Length=402, Percent_Identity=22.8855721393035, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281360293, Length=170, Percent_Identity=31.7647058823529, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 52678; Mature: 52678

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMKTSPISLLKDPSLFKTDALINGQWVAGGSRFDVNDPSNGQKLADVANLGSQDAEAAI
CCCCCCCHHHHCCCCCEECCCEECCEEEECCCEECCCCCCCCHHHHHHHHCCCCCHHHHH
AAANAAWPAWRSKTGKERHAILMKWYQLLMANQEDLGRIMTAEQGKPFAEAKGEVAYGAS
HHCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHCCCCCHHCHH
FVEWFAEEAKRVNGETLPQFDNNRRLMVIKQPIGVCAAITPWNFPLAMITRKVAPALAAG
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCC
CPVVIKPAELTPLTALAAAELAVRAGIPAGVLNVLTADSANSIAVGKVFCASDVVRHISF
CCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCC
TGSTEVGRILMAQSAPSVKKLSLELGGNAPFIVFDDADIDSAVEGAMASKYRNAGQTCVC
CCCCCCCEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEE
ANRIYVQDGVYDQFVEKFAAKVKLLKVGNGFEDGVVQGPLIEDSAVDKVQRHVADALAKG
ECEEEEECCHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
GKLQAGGHKLQGQFFEPTVISEATADMLCAREETFGPFAPVFRFKAEQEAIDAANNTEFG
CEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHCCCCCCCHH
LASYFYSRDIGRIYRVAEALEYGMVGINAGVIATEHVPFGGVKQSGLGREGSSHGMEEYV
HHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHH
EMKYLCLGDILK
HHHHHHHHHHCC
>Mature Secondary Structure
MDMKTSPISLLKDPSLFKTDALINGQWVAGGSRFDVNDPSNGQKLADVANLGSQDAEAAI
CCCCCCCHHHHCCCCCEECCCEECCEEEECCCEECCCCCCCCHHHHHHHHCCCCCHHHHH
AAANAAWPAWRSKTGKERHAILMKWYQLLMANQEDLGRIMTAEQGKPFAEAKGEVAYGAS
HHCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHCCCCCHHCHH
FVEWFAEEAKRVNGETLPQFDNNRRLMVIKQPIGVCAAITPWNFPLAMITRKVAPALAAG
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCC
CPVVIKPAELTPLTALAAAELAVRAGIPAGVLNVLTADSANSIAVGKVFCASDVVRHISF
CCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCC
TGSTEVGRILMAQSAPSVKKLSLELGGNAPFIVFDDADIDSAVEGAMASKYRNAGQTCVC
CCCCCCCEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEE
ANRIYVQDGVYDQFVEKFAAKVKLLKVGNGFEDGVVQGPLIEDSAVDKVQRHVADALAKG
ECEEEEECCHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
GKLQAGGHKLQGQFFEPTVISEATADMLCAREETFGPFAPVFRFKAEQEAIDAANNTEFG
CEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHCCCCCCCHH
LASYFYSRDIGRIYRVAEALEYGMVGINAGVIATEHVPFGGVKQSGLGREGSSHGMEEYV
HHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHH
EMKYLCLGDILK
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]