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The map label for this gene is potC [H]

Identifier: 91788776

GI number: 91788776

Start: 3079101

End: 3079925

Strand: Direct

Name: potC [H]

Synonym: Bpro_2916

Alternate gene names: 91788776

Gene position: 3079101-3079925 (Clockwise)

Preceding gene: 91788775

Following gene: 91788777

Centisome position: 59.21

GC content: 59.27

Gene sequence:

>825_bases
ATGTTCAAAATCAAAGGGCCAGTGTTCCCGCGCTATGCCACCTTGTCGGACAAGGCCGGCTGGTGGCTGCTGCGCGCCGC
CTGCGTTGCCACACTCGCCTTCCTGCTGGCACCCGTGCTGGTCATGGTGCCGCTGTCATTTTCTGACAGCTCTTTTTTGA
CTTACCCCATACCGGGCTGGTCATTGAAGTGGTATCGCAACCTGCTGGAGTCGCCGGAGTGGGTAAGGGCCGCCAAAAAC
AGTTTCATCGTGGCACCCGCCGCAACCGTGATTGCCACTGCGCTGGGCACGCTGGCCGCCGTGGGTCTGTCCAGAACCAA
CTTTCGCTTTAAAAGCCTGCTCATGGGCATTCTCATCGCGCCCATGGTGGTTCCGATTGTGGTGGTGGGTGTCGCGACCT
ACCTGTACTTTGCACCGCTTGGCCTCACAGACAGCTACATCGGACTGATCGCCGTACACGCCGCGCTGGGAGCCCCTTTT
GTCCTGACCACGGTGCTGGCGACCCTGTCGGGCTTCAACCATAACCTGGTGCGCGCCTCACTGAGCCTGGGTGAGACGCC
GGTCAATACATTTTTCAGGATCACCTTGCCGGTCATTGCGCCCGGTGTCATCTCGGGTGCGCTGTTCGCGTTTGCCACCT
CGTTTGATGAAGTGGTCGTCACACTTTTTCTGGCTGGCGCCGAACAGGTAACACTACCCAGGCAAATGTTCACCGGCATC
CGTGAAAACATCTCGCCCACGATCGCAGCCGTGGCAACCCTGCTTATTTTGTTCACCACCACCTTGCTCGTGCTGCTGGA
ATGGCTACGCGGACGCCGGAGCTGA

Upstream 100 bases:

>100_bases
TGCTGTTGACGGCCACCATGATTCTTTACGGCGTTTACCGGCGCATCGGCAAATCCGAACTCAACCTCGGTTGATATCCT
CTTACAGGCGTCAATACATC

Downstream 100 bases:

>100_bases
GAAGACTCTTCGTGCTGGCTTACTTCTCGCTGCGGCAGGGCAAATGGCTAGGCACGGAAAGAGGCATGTCTCAAACCTTT
CCCCCGCCAACAGCGAACGC

Product: binding-protein-dependent transport systems inner membrane component

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MFKIKGPVFPRYATLSDKAGWWLLRAACVATLAFLLAPVLVMVPLSFSDSSFLTYPIPGWSLKWYRNLLESPEWVRAAKN
SFIVAPAATVIATALGTLAAVGLSRTNFRFKSLLMGILIAPMVVPIVVVGVATYLYFAPLGLTDSYIGLIAVHAALGAPF
VLTTVLATLSGFNHNLVRASLSLGETPVNTFFRITLPVIAPGVISGALFAFATSFDEVVVTLFLAGAEQVTLPRQMFTGI
RENISPTIAAVATLLILFTTTLLVLLEWLRGRRS

Sequences:

>Translated_274_residues
MFKIKGPVFPRYATLSDKAGWWLLRAACVATLAFLLAPVLVMVPLSFSDSSFLTYPIPGWSLKWYRNLLESPEWVRAAKN
SFIVAPAATVIATALGTLAAVGLSRTNFRFKSLLMGILIAPMVVPIVVVGVATYLYFAPLGLTDSYIGLIAVHAALGAPF
VLTTVLATLSGFNHNLVRASLSLGETPVNTFFRITLPVIAPGVISGALFAFATSFDEVVVTLFLAGAEQVTLPRQMFTGI
RENISPTIAAVATLLILFTTTLLVLLEWLRGRRS
>Mature_274_residues
MFKIKGPVFPRYATLSDKAGWWLLRAACVATLAFLLAPVLVMVPLSFSDSSFLTYPIPGWSLKWYRNLLESPEWVRAAKN
SFIVAPAATVIATALGTLAAVGLSRTNFRFKSLLMGILIAPMVVPIVVVGVATYLYFAPLGLTDSYIGLIAVHAALGAPF
VLTTVLATLSGFNHNLVRASLSLGETPVNTFFRITLPVIAPGVISGALFAFATSFDEVVVTLFLAGAEQVTLPRQMFTGI
RENISPTIAAVATLLILFTTTLLVLLEWLRGRRS

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=207, Percent_Identity=30.4347826086957, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1787081, Length=230, Percent_Identity=34.7826086956522, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1787714, Length=253, Percent_Identity=31.6205533596838, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29533; Mature: 29533

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKIKGPVFPRYATLSDKAGWWLLRAACVATLAFLLAPVLVMVPLSFSDSSFLTYPIPGW
CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCC
SLKWYRNLLESPEWVRAAKNSFIVAPAATVIATALGTLAAVGLSRTNFRFKSLLMGILIA
CHHHHHHHHCCCHHHHHHCCCEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
PMVVPIVVVGVATYLYFAPLGLTDSYIGLIAVHAALGAPFVLTTVLATLSGFNHNLVRAS
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHH
LSLGETPVNTFFRITLPVIAPGVISGALFAFATSFDEVVVTLFLAGAEQVTLPRQMFTGI
HHCCCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHH
RENISPTIAAVATLLILFTTTLLVLLEWLRGRRS
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFKIKGPVFPRYATLSDKAGWWLLRAACVATLAFLLAPVLVMVPLSFSDSSFLTYPIPGW
CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCC
SLKWYRNLLESPEWVRAAKNSFIVAPAATVIATALGTLAAVGLSRTNFRFKSLLMGILIA
CHHHHHHHHCCCHHHHHHCCCEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
PMVVPIVVVGVATYLYFAPLGLTDSYIGLIAVHAALGAPFVLTTVLATLSGFNHNLVRAS
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHH
LSLGETPVNTFFRITLPVIAPGVISGALFAFATSFDEVVVTLFLAGAEQVTLPRQMFTGI
HHCCCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHH
RENISPTIAAVATLLILFTTTLLVLLEWLRGRRS
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]