Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788673

Identifier: 91788673

GI number: 91788673

Start: 2954885

End: 2955343

Strand: Direct

Name: 91788673

Synonym: Bpro_2811

Alternate gene names: NA

Gene position: 2954885-2955343 (Clockwise)

Preceding gene: 91788672

Following gene: 91788674

Centisome position: 56.82

GC content: 54.9

Gene sequence:

>459_bases
ATGGCAACTGCGAAAAAAGCACCGGCTAAAAAAGCGCCTGCAAAAAAGGCTGCTCCGGCAAAGAAAGTAGCTGCGAAGAA
AGCAGCTCCTGCCAAGAAGGTCGCCGCCAAAAAAGCAGCGCCCGCCAAAAAGGTAGCTGCGAAGAAAGCAGCGCCTGCCA
AGAAAGTTGCGGCCAAAAAGCCAGCAGCGAAAAAAGCGCCCGCCAAAAAGCGTACGCCCAATGCAGCGTTCATGAAAGCG
CTGACCTTGAGCCCCGCCCTGGCTGCCGTGGTGGGCGACAAGCCTTTGCCACGCACGGAAATTGTCAGCAAGCTGTGGGT
TTACATCAAATCCAAGGGCCTGCAGGACAAGGTCAACAAGCGCATGATCAACGCCGACGAAAAGCTCAAAGCCGTTTTCG
GCAAACCGCAAGTGTCGATGTTCGAAATGGCCGGCCTGATTGGCAAGCACGTCAAGTAA

Upstream 100 bases:

>100_bases
TTCGCTATGAAACTGCGTTTTTCTCCAGTAGCATCCGCATTGCCGCAAGGAAGTAGTTATCCCTGTGGTGATTTATCAAC
TTCTAGAAGGAAAATCAATC

Downstream 100 bases:

>100_bases
TCGGCTTTTGCCGACTCCCCAAAGGCCGGTTTCCACCGGCCTTTTTTTATGCTCCGACGCATTGCCTGTCGGAAGCGGCG
CCACGAAACGAGTCGACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: DNA poisomerase III; SWIB/MDM2 Domain Protein; SwiB Complex Protein; SWIB Complex; SWIB/MDM2 Domain Superfamily; DNA poisomerase Domain-Containing Protein; Swib/Mdm2 Domain Protein; SWIB Complex Protein

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MATAKKAPAKKAPAKKAAPAKKVAAKKAAPAKKVAAKKAAPAKKVAAKKAAPAKKVAAKKPAAKKAPAKKRTPNAAFMKA
LTLSPALAAVVGDKPLPRTEIVSKLWVYIKSKGLQDKVNKRMINADEKLKAVFGKPQVSMFEMAGLIGKHVK

Sequences:

>Translated_152_residues
MATAKKAPAKKAPAKKAAPAKKVAAKKAAPAKKVAAKKAAPAKKVAAKKAAPAKKVAAKKPAAKKAPAKKRTPNAAFMKA
LTLSPALAAVVGDKPLPRTEIVSKLWVYIKSKGLQDKVNKRMINADEKLKAVFGKPQVSMFEMAGLIGKHVK
>Mature_151_residues
ATAKKAPAKKAPAKKAAPAKKVAAKKAAPAKKVAAKKAAPAKKVAAKKAAPAKKVAAKKPAAKKAPAKKRTPNAAFMKAL
TLSPALAAVVGDKPLPRTEIVSKLWVYIKSKGLQDKVNKRMINADEKLKAVFGKPQVSMFEMAGLIGKHVK

Specific function: Unknown

COG id: COG5531

COG function: function code B; SWIB-domain-containing proteins implicated in chromatin remodeling

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6324869, Length=96, Percent_Identity=39.5833333333333, Blast_Score=74, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6323889, Length=78, Percent_Identity=38.4615384615385, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15893; Mature: 15761

Theoretical pI: Translated: 11.59; Mature: 11.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATAKKAPAKKAPAKKAAPAKKVAAKKAAPAKKVAAKKAAPAKKVAAKKAAPAKKVAAKK
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHCC
PAAKKAPAKKRTPNAAFMKALTLSPALAAVVGDKPLPRTEIVSKLWVYIKSKGLQDKVNK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHH
RMINADEKLKAVFGKPQVSMFEMAGLIGKHVK
HHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATAKKAPAKKAPAKKAAPAKKVAAKKAAPAKKVAAKKAAPAKKVAAKKAAPAKKVAAKK
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHCC
PAAKKAPAKKRTPNAAFMKALTLSPALAAVVGDKPLPRTEIVSKLWVYIKSKGLQDKVNK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHH
RMINADEKLKAVFGKPQVSMFEMAGLIGKHVK
HHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA