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The map label for this gene is dppB [H]

Identifier: 91788674

GI number: 91788674

Start: 2955758

End: 2956768

Strand: Direct

Name: dppB [H]

Synonym: Bpro_2812

Alternate gene names: 91788674

Gene position: 2955758-2956768 (Clockwise)

Preceding gene: 91788673

Following gene: 91788675

Centisome position: 56.84

GC content: 61.52

Gene sequence:

>1011_bases
ATGCTTCGCTTTATTTTTACCCGACTCAGCCTGATCATTCCCACGTTTCTGGGCATGACGCTGCTGGCCTTTTTTCTGAT
TCGCCTGGTGCCGGGCGACCCCATTGAAACCCTCGCCGGCGAGCGTGGCATCGATCCGGTGCGGCATGCGCAGCTGCTCA
AAGAATACGGCCTGGACCGGCCGGTTCTGGTGCAGTACGGCATCTACATCGGCCGCGTGCTCAATGGCGATCTCGGCAAA
TCCCTCATCACGCAGGAACCCGTGCTGCGTGAATTCCTCACGCTCTTCCCCGCCACCATCGAACTGGCCCTCTGCGCCAT
CGTGTTCGCCCTGGTGATTGGCATTCCCGCCGGCATTCTGGCTGCGGTCAAGCGCAACTCGATACTGGACCACGGGGTCA
TGGGCGTCTCGCTGACCGGTTACTCCATGCCGATTTTCTGGTGGGGCCTGCTGCTGATCCTGCTTTTCTCGGTACAGCTC
GGCTGGACCCCTGTCTCGGGCCGCATGGCGGTGCAGTACTTCATTGAACCCACGACCGGCTTCCTGCTCATCGACTCGCT
GCTGTCAGAGGACAAAGGCGCATTCTGGTCGGCTGCATCGCATCTGATTTTGCCGATGATTGTGCTGGGGACCAACCCGC
TGGCGGTGATTGCCCGCATGACGCGCTCGGCCATGCTGGAAGTGCTGGGTGAAGACTACATCCGCACCGCGCGCGCCAAG
GGGCTTTCCAACCTGCGCGTCGTCGCCCTCCATGCCCTGCGCAATGCCTTGATCCCGGTGGTAACCGTGATTGGCCTGCA
GGTCGGCGTCCTGTTCACGGGGGCCATCCTCACCGAGACCATCTTTTCCTGGCCTGGCGTCGGCAAATGGCTGATCGAAG
CCATCAGCCGCCGCGACTACCCGGTCCTGCAGGGCGGCATCCTGCTGCTGGGCGTGATCGTGATGGCCGTCAATCTGCTG
GTGGACATCACCTACGGCATCATCAACCCACGCATCAGGTACCAGCGATGA

Upstream 100 bases:

>100_bases
TAAAAACCAGCGCAACGAAGATTTTCATTGCCCCGACCTGCCACTTCTGTGACGAATTTTCCGCTGCCCGCGTGAATGCC
TGTCTGGGTCACCCGAAATA

Downstream 100 bases:

>100_bases
GCACGGCCACCTTGAAAAAAGCCACCGTGGTGCCCGGTACACCACCGGCACCGCCGCATCCGTTGCGCGAATTCTGGAAC
TACTTCAGCGCCAATCGTGG

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MLRFIFTRLSLIIPTFLGMTLLAFFLIRLVPGDPIETLAGERGIDPVRHAQLLKEYGLDRPVLVQYGIYIGRVLNGDLGK
SLITQEPVLREFLTLFPATIELALCAIVFALVIGIPAGILAAVKRNSILDHGVMGVSLTGYSMPIFWWGLLLILLFSVQL
GWTPVSGRMAVQYFIEPTTGFLLIDSLLSEDKGAFWSAASHLILPMIVLGTNPLAVIARMTRSAMLEVLGEDYIRTARAK
GLSNLRVVALHALRNALIPVVTVIGLQVGVLFTGAILTETIFSWPGVGKWLIEAISRRDYPVLQGGILLLGVIVMAVNLL
VDITYGIINPRIRYQR

Sequences:

>Translated_336_residues
MLRFIFTRLSLIIPTFLGMTLLAFFLIRLVPGDPIETLAGERGIDPVRHAQLLKEYGLDRPVLVQYGIYIGRVLNGDLGK
SLITQEPVLREFLTLFPATIELALCAIVFALVIGIPAGILAAVKRNSILDHGVMGVSLTGYSMPIFWWGLLLILLFSVQL
GWTPVSGRMAVQYFIEPTTGFLLIDSLLSEDKGAFWSAASHLILPMIVLGTNPLAVIARMTRSAMLEVLGEDYIRTARAK
GLSNLRVVALHALRNALIPVVTVIGLQVGVLFTGAILTETIFSWPGVGKWLIEAISRRDYPVLQGGILLLGVIVMAVNLL
VDITYGIINPRIRYQR
>Mature_336_residues
MLRFIFTRLSLIIPTFLGMTLLAFFLIRLVPGDPIETLAGERGIDPVRHAQLLKEYGLDRPVLVQYGIYIGRVLNGDLGK
SLITQEPVLREFLTLFPATIELALCAIVFALVIGIPAGILAAVKRNSILDHGVMGVSLTGYSMPIFWWGLLLILLFSVQL
GWTPVSGRMAVQYFIEPTTGFLLIDSLLSEDKGAFWSAASHLILPMIVLGTNPLAVIARMTRSAMLEVLGEDYIRTARAK
GLSNLRVVALHALRNALIPVVTVIGLQVGVLFTGAILTETIFSWPGVGKWLIEAISRRDYPVLQGGILLLGVIVMAVNLL
VDITYGIINPRIRYQR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=339, Percent_Identity=61.6519174041298, Blast_Score=431, Evalue=1e-122,
Organism=Escherichia coli, GI1787053, Length=339, Percent_Identity=40.117994100295, Blast_Score=246, Evalue=1e-66,
Organism=Escherichia coli, GI1787761, Length=317, Percent_Identity=46.3722397476341, Blast_Score=233, Evalue=2e-62,
Organism=Escherichia coli, GI1787550, Length=265, Percent_Identity=39.622641509434, Blast_Score=213, Evalue=2e-56,
Organism=Escherichia coli, GI1789888, Length=338, Percent_Identity=35.207100591716, Blast_Score=212, Evalue=2e-56,
Organism=Escherichia coli, GI1787497, Length=337, Percent_Identity=33.8278931750742, Blast_Score=201, Evalue=4e-53,
Organism=Escherichia coli, GI1788504, Length=377, Percent_Identity=26.525198938992, Blast_Score=135, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36913; Mature: 36913

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRFIFTRLSLIIPTFLGMTLLAFFLIRLVPGDPIETLAGERGIDPVRHAQLLKEYGLDR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCC
PVLVQYGIYIGRVLNGDLGKSLITQEPVLREFLTLFPATIELALCAIVFALVIGIPAGIL
CHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AAVKRNSILDHGVMGVSLTGYSMPIFWWGLLLILLFSVQLGWTPVSGRMAVQYFIEPTTG
HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCH
FLLIDSLLSEDKGAFWSAASHLILPMIVLGTNPLAVIARMTRSAMLEVLGEDYIRTARAK
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLSNLRVVALHALRNALIPVVTVIGLQVGVLFTGAILTETIFSWPGVGKWLIEAISRRDY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
PVLQGGILLLGVIVMAVNLLVDITYGIINPRIRYQR
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLRFIFTRLSLIIPTFLGMTLLAFFLIRLVPGDPIETLAGERGIDPVRHAQLLKEYGLDR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCC
PVLVQYGIYIGRVLNGDLGKSLITQEPVLREFLTLFPATIELALCAIVFALVIGIPAGIL
CHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AAVKRNSILDHGVMGVSLTGYSMPIFWWGLLLILLFSVQLGWTPVSGRMAVQYFIEPTTG
HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCH
FLLIDSLLSEDKGAFWSAASHLILPMIVLGTNPLAVIARMTRSAMLEVLGEDYIRTARAK
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLSNLRVVALHALRNALIPVVTVIGLQVGVLFTGAILTETIFSWPGVGKWLIEAISRRDY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
PVLQGGILLLGVIVMAVNLLVDITYGIINPRIRYQR
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]