| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788630
Identifier: 91788630
GI number: 91788630
Start: 2910573
End: 2911400
Strand: Reverse
Name: 91788630
Synonym: Bpro_2768
Alternate gene names: NA
Gene position: 2911400-2910573 (Counterclockwise)
Preceding gene: 91788631
Following gene: 91788629
Centisome position: 55.99
GC content: 66.67
Gene sequence:
>828_bases ATGTTGTTTCAACGATTGATTTGGGCCGCCCTGGCTGCCGCCTTGCTGGGGGGCAGTGTGCAGTCCGGTGTGCAACAGTG GCAGGCCGTGCCGATTATTCTGGCGGCCGAGGTGTATGAGGGGCAAAAGGCCGAGGCACCCGCAGAGCCGCCCGCACCCG CTGCGCACGTCCACGCCGAAGGTGTGGCAACTGAACACGCGCACGACCATGGCAGCGCCGAGGAATGGGCGCCGGCTGAT GGTGCCGAGCGCATGTTCTGGACCTGGGTGGCCAACGTTCTGCACGCCTTCAGCATGGCGCTTTTGGTGTTTGCCGTGAT GGGTGTCTGCCTGTGGCGCGGCACCGCCGTGCGTTCGCTGCCGCTGGCCTTGCTGGTGGCTGCGGCGGGCTGGCTCAGCT TTCACTTCTGGCCATCACTGGGCCTGCACGCCGAGATTCCCGGCATGGATGCGGCCCGTCTGGGCTCGCGCCAGGGCTGG TGGGTGTTGGCTGCGGGCAGCGCAGCATTGGCCTGTGCCTCGCTGGCGGGCCTGCGTCATCCTTTGCGCTGGGCTGCCGC AGCGGCGTGGCTGGCTTTGCCTTTTGTGGTGGGTGCTCCGCACATTAGCGCCGACCCGTTGGCCGGCTTCAGCGGCGCAG CGCAGCTTGCTTTGCGCGAACTCGGCACGCAGTTCATCTGGGCCACCACCTGGGTGTCATTGTCGTTCTGGGCCTGCATG GGGCTGGTATGCGGCGCGGCGTTTCAGCGCTGGCTGCGTCCGGTGCTGGAAGCAACTTTTGAACGCTCGAAGCCGGTTGC ATCAGCCGGCACGGCGGTGAGCCCATGA
Upstream 100 bases:
>100_bases GTACGGCGTGGCTTTTGCTGAAAGCCCGCTGGCCCACAACGCCGCCCACGACGTGCGCCACGTCACTGTCAAACCCTGCC ACTGAGCCAGGGAGGTTTTC
Downstream 100 bases:
>100_bases CCGGCCCCAAAGGAAAAATCATGCTGGTGGGCATTGGTCCCGGCAGCCATGACCATATGACGCAGCGCGCCCGTGCCGCC ATTGCCGAGGCGGACGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MLFQRLIWAALAAALLGGSVQSGVQQWQAVPIILAAEVYEGQKAEAPAEPPAPAAHVHAEGVATEHAHDHGSAEEWAPAD GAERMFWTWVANVLHAFSMALLVFAVMGVCLWRGTAVRSLPLALLVAAAGWLSFHFWPSLGLHAEIPGMDAARLGSRQGW WVLAAGSAALACASLAGLRHPLRWAAAAAWLALPFVVGAPHISADPLAGFSGAAQLALRELGTQFIWATTWVSLSFWACM GLVCGAAFQRWLRPVLEATFERSKPVASAGTAVSP
Sequences:
>Translated_275_residues MLFQRLIWAALAAALLGGSVQSGVQQWQAVPIILAAEVYEGQKAEAPAEPPAPAAHVHAEGVATEHAHDHGSAEEWAPAD GAERMFWTWVANVLHAFSMALLVFAVMGVCLWRGTAVRSLPLALLVAAAGWLSFHFWPSLGLHAEIPGMDAARLGSRQGW WVLAAGSAALACASLAGLRHPLRWAAAAAWLALPFVVGAPHISADPLAGFSGAAQLALRELGTQFIWATTWVSLSFWACM GLVCGAAFQRWLRPVLEATFERSKPVASAGTAVSP >Mature_275_residues MLFQRLIWAALAAALLGGSVQSGVQQWQAVPIILAAEVYEGQKAEAPAEPPAPAAHVHAEGVATEHAHDHGSAEEWAPAD GAERMFWTWVANVLHAFSMALLVFAVMGVCLWRGTAVRSLPLALLVAAAGWLSFHFWPSLGLHAEIPGMDAARLGSRQGW WVLAAGSAALACASLAGLRHPLRWAAAAAWLALPFVVGAPHISADPLAGFSGAAQLALRELGTQFIWATTWVSLSFWACM GLVCGAAFQRWLRPVLEATFERSKPVASAGTAVSP
Specific function: Unknown
COG id: COG5446
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29078; Mature: 29078
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFQRLIWAALAAALLGGSVQSGVQQWQAVPIILAAEVYEGQKAEAPAEPPAPAAHVHAE CHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHEEHHHHCCCCCCCCCCCCCCCHHHHHC GVATEHAHDHGSAEEWAPADGAERMFWTWVANVLHAFSMALLVFAVMGVCLWRGTAVRSL CCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH PLALLVAAAGWLSFHFWPSLGLHAEIPGMDAARLGSRQGWWVLAAGSAALACASLAGLRH HHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHCCCCCCEEEECCHHHHHHHHHHHHHH PLRWAAAAAWLALPFVVGAPHISADPLAGFSGAAQLALRELGTQFIWATTWVSLSFWACM HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH GLVCGAAFQRWLRPVLEATFERSKPVASAGTAVSP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MLFQRLIWAALAAALLGGSVQSGVQQWQAVPIILAAEVYEGQKAEAPAEPPAPAAHVHAE CHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHEEHHHHCCCCCCCCCCCCCCCHHHHHC GVATEHAHDHGSAEEWAPADGAERMFWTWVANVLHAFSMALLVFAVMGVCLWRGTAVRSL CCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH PLALLVAAAGWLSFHFWPSLGLHAEIPGMDAARLGSRQGWWVLAAGSAALACASLAGLRH HHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHCCCCCCEEEECCHHHHHHHHHHHHHH PLRWAAAAAWLALPFVVGAPHISADPLAGFSGAAQLALRELGTQFIWATTWVSLSFWACM HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH GLVCGAAFQRWLRPVLEATFERSKPVASAGTAVSP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA