Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788573

Identifier: 91788573

GI number: 91788573

Start: 2856766

End: 2857299

Strand: Direct

Name: 91788573

Synonym: Bpro_2711

Alternate gene names: NA

Gene position: 2856766-2857299 (Clockwise)

Preceding gene: 91788571

Following gene: 91788575

Centisome position: 54.94

GC content: 53.93

Gene sequence:

>534_bases
ATGGTTATTGATTTAAATATATCCAAAATAACGATGAAAATCCATCCACAAACCATTCATTGGGACAAAAACCAGCCTTC
GAAACGCACCATGAGTCTCCAAAAATCAGTCAAGGAACGTTTTTTCCACGCCCTCGGGTTTGAAGTGGTGGCGATCGCTA
TTTGCGCCCCATTGGGCACCTGGCTGCTCGGTTATTCGCTGGCGCACATGGGTTTGCTGACCTTGATGATCTCGCTGATC
GCGATGACCTGGAACATGACGTTCAACGCACTTTTTGACCGGGCGCAGCGCCGCTGGGGATTCCGGCGGACCCTGTTGGC
CCGCGGCGTTCATTCCGTCCTGTTCGAAACGGGCTTGATTGTGGCCGTCGTGCCGCTGGCCGCCTGGTGGCTGGACATTG
GCCTGTGGGAAGCGTTTGTGCTGGACATTGGCATCGTGCTGTTTTTCCTGCCGTATACCTTCGCCTTCAACTGGATCTAC
GACCATCTGCGTGCCGTGGTTATTGCACGTAAAAACCGCCTGTCAGCGGCCTGA

Upstream 100 bases:

>100_bases
GTGGCGGCCTCGGCAAAGGCCGTCAGGGCTTCCGGGGAATGACGCATCGGGCTATCTCCTCATTCCATCACATCATCGCG
TCAAACCATCAATTTTTTAG

Downstream 100 bases:

>100_bases
GGAATGCCCCCGAAAAGAGGGCGTATGCGAGCAACCCTCTACTTCATCTGAACTGATCCACTCACACTCACCAGCACCGT
GCTCTTGCCAGCCTCCACCG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Pair Domain Protein; Transmembrane Pair; Transmembrane Pair Permease Of Facilitator Superfamily; Transmembrane Pair Family Protein; Bacterial Transmembrane Pair Family; Outer Membrane Protein; Transmembrane Pair Protein; Transmembrane Protein; Bacterial Transmembrane Pair Family Protein

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MVIDLNISKITMKIHPQTIHWDKNQPSKRTMSLQKSVKERFFHALGFEVVAIAICAPLGTWLLGYSLAHMGLLTLMISLI
AMTWNMTFNALFDRAQRRWGFRRTLLARGVHSVLFETGLIVAVVPLAAWWLDIGLWEAFVLDIGIVLFFLPYTFAFNWIY
DHLRAVVIARKNRLSAA

Sequences:

>Translated_177_residues
MVIDLNISKITMKIHPQTIHWDKNQPSKRTMSLQKSVKERFFHALGFEVVAIAICAPLGTWLLGYSLAHMGLLTLMISLI
AMTWNMTFNALFDRAQRRWGFRRTLLARGVHSVLFETGLIVAVVPLAAWWLDIGLWEAFVLDIGIVLFFLPYTFAFNWIY
DHLRAVVIARKNRLSAA
>Mature_177_residues
MVIDLNISKITMKIHPQTIHWDKNQPSKRTMSLQKSVKERFFHALGFEVVAIAICAPLGTWLLGYSLAHMGLLTLMISLI
AMTWNMTFNALFDRAQRRWGFRRTLLARGVHSVLFETGLIVAVVPLAAWWLDIGLWEAFVLDIGIVLFFLPYTFAFNWIY
DHLRAVVIARKNRLSAA

Specific function: Unknown

COG id: COG4125

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20315; Mature: 20315

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIDLNISKITMKIHPQTIHWDKNQPSKRTMSLQKSVKERFFHALGFEVVAIAICAPLGT
CEEECEEEEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLLGYSLAHMGLLTLMISLIAMTWNMTFNALFDRAQRRWGFRRTLLARGVHSVLFETGLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAVVPLAAWWLDIGLWEAFVLDIGIVLFFLPYTFAFNWIYDHLRAVVIARKNRLSAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVIDLNISKITMKIHPQTIHWDKNQPSKRTMSLQKSVKERFFHALGFEVVAIAICAPLGT
CEEECEEEEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLLGYSLAHMGLLTLMISLIAMTWNMTFNALFDRAQRRWGFRRTLLARGVHSVLFETGLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAVVPLAAWWLDIGLWEAFVLDIGIVLFFLPYTFAFNWIYDHLRAVVIARKNRLSAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA