| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is cdsA [H]
Identifier: 91788552
GI number: 91788552
Start: 2831942
End: 2832790
Strand: Reverse
Name: cdsA [H]
Synonym: Bpro_2690
Alternate gene names: 91788552
Gene position: 2832790-2831942 (Counterclockwise)
Preceding gene: 91788553
Following gene: 91788551
Centisome position: 54.47
GC content: 65.84
Gene sequence:
>849_bases ATGCTTAAACAGCGTGTGATCACGGCCATTGTCCTTTTGGCCATCTTGCTGCCTGCACTTTTCTACAAGACGCCGGTGGC CTTTGCTGCTGTCGCGCTGGTGTTGATGGCTGCTGGCAGCTGGGAGTGGGGCCGCCTGAATTCATTGGGGCAGGGTGGCT CCGTGGGGCTTGCCGCGCTGTGCGTGCTGGGCTGCGGGCTATCGTGGTATGGCGGCCTGCTCGATCAATCCTTGCCCCTG CTGTGGGCCACCGCGGGAGCCGCCTGGGTGCTGGCTGGTGCGTGGCTGTTGCGCAATGGTGTGACCGGCTGGCCGCGCAT CCCGAAGGCCGTGCGGCTGGTGGGGGGACTGCTGGCGCTCTGGCTGGCCTGGCTGGCCGTGGCGCAGGCGCGGGTAATCG GGGTCAATTTCCTGCTTTCGGTGCTGACGCTGGTCTGGGTGGCCGACATCTTTGCCTATTTTGCGGGGCGTACATTTGGG GGACGCTTCAGCAGGGGCAAGCTGGCGCCATCCATCAGCCCCGGCAAAAGCTGGGAAGGCGTCTGGGGCGGCATGGCGGG TGTGGTGGCCCTGTCGCTGGCCTGGGTGACCATGGGGGCCTCGGGTGCTGGCGCCGGCCAGACGCTGTATGCCCGCCTGA CGGAGCGCCATGGCATCGTCGTGATGCTGTTGGCGGTTATTTTTCTGGCTGCCATGAGCGTGGTGGGTGACCTGGTCGAG TCGCTGATCAAGCGCAGCGCGGGTGTGAAGGACTCCAGCGCCTTGCTGCCGGGCCACGGCGGGGTGCTTGACCGTGTCGA TGCGCTGTTGCCGACCTTGCCGCTGGCCATGATGCTGGCCACTCTTTAG
Upstream 100 bases:
>100_bases ATGAAGCGATTGCTGTCTTTCGCACCCGCGAGCGCCGTTTTGGCCAGACGTCGGCGCAGGTCAGCGGGCATGGCCAAAAA ACCACTCCGAAGGCAGCCTG
Downstream 100 bases:
>100_bases GCTTGTTGAATGTCTTTCAAAAAACAGCGTATCACCGTTCTGGGTTCAACCGGCTCCATTGGCGTCAACACACTTGACGT GATTGCCAGCCATCCGGAGC
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MLKQRVITAIVLLAILLPALFYKTPVAFAAVALVLMAAGSWEWGRLNSLGQGGSVGLAALCVLGCGLSWYGGLLDQSLPL LWATAGAAWVLAGAWLLRNGVTGWPRIPKAVRLVGGLLALWLAWLAVAQARVIGVNFLLSVLTLVWVADIFAYFAGRTFG GRFSRGKLAPSISPGKSWEGVWGGMAGVVALSLAWVTMGASGAGAGQTLYARLTERHGIVVMLLAVIFLAAMSVVGDLVE SLIKRSAGVKDSSALLPGHGGVLDRVDALLPTLPLAMMLATL
Sequences:
>Translated_282_residues MLKQRVITAIVLLAILLPALFYKTPVAFAAVALVLMAAGSWEWGRLNSLGQGGSVGLAALCVLGCGLSWYGGLLDQSLPL LWATAGAAWVLAGAWLLRNGVTGWPRIPKAVRLVGGLLALWLAWLAVAQARVIGVNFLLSVLTLVWVADIFAYFAGRTFG GRFSRGKLAPSISPGKSWEGVWGGMAGVVALSLAWVTMGASGAGAGQTLYARLTERHGIVVMLLAVIFLAAMSVVGDLVE SLIKRSAGVKDSSALLPGHGGVLDRVDALLPTLPLAMMLATL >Mature_282_residues MLKQRVITAIVLLAILLPALFYKTPVAFAAVALVLMAAGSWEWGRLNSLGQGGSVGLAALCVLGCGLSWYGGLLDQSLPL LWATAGAAWVLAGAWLLRNGVTGWPRIPKAVRLVGGLLALWLAWLAVAQARVIGVNFLLSVLTLVWVADIFAYFAGRTFG GRFSRGKLAPSISPGKSWEGVWGGMAGVVALSLAWVTMGASGAGAGQTLYARLTERHGIVVMLLAVIFLAAMSVVGDLVE SLIKRSAGVKDSSALLPGHGGVLDRVDALLPTLPLAMMLATL
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=293, Percent_Identity=38.2252559726962, Blast_Score=124, Evalue=6e-30, Organism=Escherichia coli, GI1787677, Length=127, Percent_Identity=38.5826771653543, Blast_Score=74, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 29397; Mature: 29397
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKQRVITAIVLLAILLPALFYKTPVAFAAVALVLMAAGSWEWGRLNSLGQGGSVGLAAL CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH CVLGCGLSWYGGLLDQSLPLLWATAGAAWVLAGAWLLRNGVTGWPRIPKAVRLVGGLLAL HHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH WLAWLAVAQARVIGVNFLLSVLTLVWVADIFAYFAGRTFGGRFSRGKLAPSISPGKSWEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH VWGGMAGVVALSLAWVTMGASGAGAGQTLYARLTERHGIVVMLLAVIFLAAMSVVGDLVE HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH SLIKRSAGVKDSSALLPGHGGVLDRVDALLPTLPLAMMLATL HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKQRVITAIVLLAILLPALFYKTPVAFAAVALVLMAAGSWEWGRLNSLGQGGSVGLAAL CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH CVLGCGLSWYGGLLDQSLPLLWATAGAAWVLAGAWLLRNGVTGWPRIPKAVRLVGGLLAL HHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH WLAWLAVAQARVIGVNFLLSVLTLVWVADIFAYFAGRTFGGRFSRGKLAPSISPGKSWEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH VWGGMAGVVALSLAWVTMGASGAGAGQTLYARLTERHGIVVMLLAVIFLAAMSVVGDLVE HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH SLIKRSAGVKDSSALLPGHGGVLDRVDALLPTLPLAMMLATL HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]