Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is cdsA [H]

Identifier: 91788552

GI number: 91788552

Start: 2831942

End: 2832790

Strand: Reverse

Name: cdsA [H]

Synonym: Bpro_2690

Alternate gene names: 91788552

Gene position: 2832790-2831942 (Counterclockwise)

Preceding gene: 91788553

Following gene: 91788551

Centisome position: 54.47

GC content: 65.84

Gene sequence:

>849_bases
ATGCTTAAACAGCGTGTGATCACGGCCATTGTCCTTTTGGCCATCTTGCTGCCTGCACTTTTCTACAAGACGCCGGTGGC
CTTTGCTGCTGTCGCGCTGGTGTTGATGGCTGCTGGCAGCTGGGAGTGGGGCCGCCTGAATTCATTGGGGCAGGGTGGCT
CCGTGGGGCTTGCCGCGCTGTGCGTGCTGGGCTGCGGGCTATCGTGGTATGGCGGCCTGCTCGATCAATCCTTGCCCCTG
CTGTGGGCCACCGCGGGAGCCGCCTGGGTGCTGGCTGGTGCGTGGCTGTTGCGCAATGGTGTGACCGGCTGGCCGCGCAT
CCCGAAGGCCGTGCGGCTGGTGGGGGGACTGCTGGCGCTCTGGCTGGCCTGGCTGGCCGTGGCGCAGGCGCGGGTAATCG
GGGTCAATTTCCTGCTTTCGGTGCTGACGCTGGTCTGGGTGGCCGACATCTTTGCCTATTTTGCGGGGCGTACATTTGGG
GGACGCTTCAGCAGGGGCAAGCTGGCGCCATCCATCAGCCCCGGCAAAAGCTGGGAAGGCGTCTGGGGCGGCATGGCGGG
TGTGGTGGCCCTGTCGCTGGCCTGGGTGACCATGGGGGCCTCGGGTGCTGGCGCCGGCCAGACGCTGTATGCCCGCCTGA
CGGAGCGCCATGGCATCGTCGTGATGCTGTTGGCGGTTATTTTTCTGGCTGCCATGAGCGTGGTGGGTGACCTGGTCGAG
TCGCTGATCAAGCGCAGCGCGGGTGTGAAGGACTCCAGCGCCTTGCTGCCGGGCCACGGCGGGGTGCTTGACCGTGTCGA
TGCGCTGTTGCCGACCTTGCCGCTGGCCATGATGCTGGCCACTCTTTAG

Upstream 100 bases:

>100_bases
ATGAAGCGATTGCTGTCTTTCGCACCCGCGAGCGCCGTTTTGGCCAGACGTCGGCGCAGGTCAGCGGGCATGGCCAAAAA
ACCACTCCGAAGGCAGCCTG

Downstream 100 bases:

>100_bases
GCTTGTTGAATGTCTTTCAAAAAACAGCGTATCACCGTTCTGGGTTCAACCGGCTCCATTGGCGTCAACACACTTGACGT
GATTGCCAGCCATCCGGAGC

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MLKQRVITAIVLLAILLPALFYKTPVAFAAVALVLMAAGSWEWGRLNSLGQGGSVGLAALCVLGCGLSWYGGLLDQSLPL
LWATAGAAWVLAGAWLLRNGVTGWPRIPKAVRLVGGLLALWLAWLAVAQARVIGVNFLLSVLTLVWVADIFAYFAGRTFG
GRFSRGKLAPSISPGKSWEGVWGGMAGVVALSLAWVTMGASGAGAGQTLYARLTERHGIVVMLLAVIFLAAMSVVGDLVE
SLIKRSAGVKDSSALLPGHGGVLDRVDALLPTLPLAMMLATL

Sequences:

>Translated_282_residues
MLKQRVITAIVLLAILLPALFYKTPVAFAAVALVLMAAGSWEWGRLNSLGQGGSVGLAALCVLGCGLSWYGGLLDQSLPL
LWATAGAAWVLAGAWLLRNGVTGWPRIPKAVRLVGGLLALWLAWLAVAQARVIGVNFLLSVLTLVWVADIFAYFAGRTFG
GRFSRGKLAPSISPGKSWEGVWGGMAGVVALSLAWVTMGASGAGAGQTLYARLTERHGIVVMLLAVIFLAAMSVVGDLVE
SLIKRSAGVKDSSALLPGHGGVLDRVDALLPTLPLAMMLATL
>Mature_282_residues
MLKQRVITAIVLLAILLPALFYKTPVAFAAVALVLMAAGSWEWGRLNSLGQGGSVGLAALCVLGCGLSWYGGLLDQSLPL
LWATAGAAWVLAGAWLLRNGVTGWPRIPKAVRLVGGLLALWLAWLAVAQARVIGVNFLLSVLTLVWVADIFAYFAGRTFG
GRFSRGKLAPSISPGKSWEGVWGGMAGVVALSLAWVTMGASGAGAGQTLYARLTERHGIVVMLLAVIFLAAMSVVGDLVE
SLIKRSAGVKDSSALLPGHGGVLDRVDALLPTLPLAMMLATL

Specific function: Phospholipid biosynthesis. [C]

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI87081696, Length=293, Percent_Identity=38.2252559726962, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1787677, Length=127, Percent_Identity=38.5826771653543, Blast_Score=74, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 29397; Mature: 29397

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]