| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788521
Identifier: 91788521
GI number: 91788521
Start: 2795666
End: 2796469
Strand: Reverse
Name: 91788521
Synonym: Bpro_2659
Alternate gene names: NA
Gene position: 2796469-2795666 (Counterclockwise)
Preceding gene: 91788523
Following gene: 91788520
Centisome position: 53.78
GC content: 61.69
Gene sequence:
>804_bases ATGGCTTCAACGGCATCCTGGCAAGGTCGACTCACGCAAATTGGGCGCGCTGCGCAACAGTGGGTCATCGAATGGTGGCG CCTGATACACCTCGGGGCCCTGCTGTTGGTCCTGACGCTGTCGCCCTCAAGCTACAGCCGGGAAAGTCGGCTGGTGCTGT CACGGCACATCTACCTGAATACAGCTCCTATTCTCTTGTGGTTTACCGTACTGTGCGCGTTGGTGACTGTGGTGCTCACA CGCATTGTGGTGGTCACGGCGCTCAGTTATGGCCTGTCGCAATATGCGCTTCAGGTCGTCATCCGTGTGCTGGTGCTGGA GCTGATTCCCTTGACCGCCGCGCTGTTTGTGGCGCTGCGTTGCACCATCCCGGATGGGGCTGAATTGACGGCCATGCAAG CCAGCGGCCAGCTCGACGAAATGCGGCGCCAGGGGGGCGACCCTGTGCGCCGCGAGGTGCTGCCGCGGGTGGTGGCCGGC ATGTTCTCGGGCATTACGCTGGCGGCGCTCAGCAGCGTGGTCGCGTTGGTGGTGGCCTATGTGGCGGTGTATGGTTTCAC TGTGTCGGGGCTCGCCGCCTACACGCGGCTGTTTGGCCAGGTCTTCAGCCCGGCCGTGACCCTGATCTTTGTCCTCAAGA CGCTATTTTTTTGCCTCGCTGTGGCCTTGATCCCCATGGCCTCCGCCCTGTACGGCATGCGCGAGGCGAGCGTGCGCACC AGCGCTGAAATGCGCGGACTGGTGCGCATGTTTGCCGTGATCCTGCTGATTGAAGTGACCTCACTGGTTGGCAACTACTA TTGA
Upstream 100 bases:
>100_bases CAGGGACGACGCGTACGGAAGCGGTTCGGAGAGGATGGAGAGGCGCGAAAACGCACGCCATCCTACATGCGTCAAGTTTA CCCACAGGTATCATGGTTGA
Downstream 100 bases:
>100_bases CTCTGGAACCTGTATACCCATGAGCCCACCCCAAGACCCGCTACCTCCGAACGCTCCGCCCGCACCGGCACCGGATCCTG ATTCGGTGGATCCCCTCCGG
Product: ABC transporter permease
Products: NA
Alternate protein names: ABC Transporter Permease Protein; ABC-Type Transport System Permease; ABC-Type Transport System Permease Component
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MASTASWQGRLTQIGRAAQQWVIEWWRLIHLGALLLVLTLSPSSYSRESRLVLSRHIYLNTAPILLWFTVLCALVTVVLT RIVVVTALSYGLSQYALQVVIRVLVLELIPLTAALFVALRCTIPDGAELTAMQASGQLDEMRRQGGDPVRREVLPRVVAG MFSGITLAALSSVVALVVAYVAVYGFTVSGLAAYTRLFGQVFSPAVTLIFVLKTLFFCLAVALIPMASALYGMREASVRT SAEMRGLVRMFAVILLIEVTSLVGNYY
Sequences:
>Translated_267_residues MASTASWQGRLTQIGRAAQQWVIEWWRLIHLGALLLVLTLSPSSYSRESRLVLSRHIYLNTAPILLWFTVLCALVTVVLT RIVVVTALSYGLSQYALQVVIRVLVLELIPLTAALFVALRCTIPDGAELTAMQASGQLDEMRRQGGDPVRREVLPRVVAG MFSGITLAALSSVVALVVAYVAVYGFTVSGLAAYTRLFGQVFSPAVTLIFVLKTLFFCLAVALIPMASALYGMREASVRT SAEMRGLVRMFAVILLIEVTSLVGNYY >Mature_266_residues ASTASWQGRLTQIGRAAQQWVIEWWRLIHLGALLLVLTLSPSSYSRESRLVLSRHIYLNTAPILLWFTVLCALVTVVLTR IVVVTALSYGLSQYALQVVIRVLVLELIPLTAALFVALRCTIPDGAELTAMQASGQLDEMRRQGGDPVRREVLPRVVAGM FSGITLAALSSVVALVVAYVAVYGFTVSGLAAYTRLFGQVFSPAVTLIFVLKTLFFCLAVALIPMASALYGMREASVRTS AEMRGLVRMFAVILLIEVTSLVGNYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29173; Mature: 29042
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTASWQGRLTQIGRAAQQWVIEWWRLIHLGALLLVLTLSPSSYSRESRLVLSRHIYLN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH TAPILLWFTVLCALVTVVLTRIVVVTALSYGLSQYALQVVIRVLVLELIPLTAALFVALR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CTIPDGAELTAMQASGQLDEMRRQGGDPVRREVLPRVVAGMFSGITLAALSSVVALVVAY CCCCCCCCCHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAVYGFTVSGLAAYTRLFGQVFSPAVTLIFVLKTLFFCLAVALIPMASALYGMREASVRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAEMRGLVRMFAVILLIEVTSLVGNYY HHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ASTASWQGRLTQIGRAAQQWVIEWWRLIHLGALLLVLTLSPSSYSRESRLVLSRHIYLN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH TAPILLWFTVLCALVTVVLTRIVVVTALSYGLSQYALQVVIRVLVLELIPLTAALFVALR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CTIPDGAELTAMQASGQLDEMRRQGGDPVRREVLPRVVAGMFSGITLAALSSVVALVVAY CCCCCCCCCHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAVYGFTVSGLAAYTRLFGQVFSPAVTLIFVLKTLFFCLAVALIPMASALYGMREASVRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAEMRGLVRMFAVILLIEVTSLVGNYY HHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA