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The map label for this gene is yjiR [H]

Identifier: 91788523

GI number: 91788523

Start: 2797367

End: 2798818

Strand: Reverse

Name: yjiR [H]

Synonym: Bpro_2661

Alternate gene names: 91788523

Gene position: 2798818-2797367 (Counterclockwise)

Preceding gene: 91788528

Following gene: 91788521

Centisome position: 53.82

GC content: 65.36

Gene sequence:

>1452_bases
ATGGGTGCGCAACCGCTTTACCTCCGGCTCTCCAGCCACTACCGCCAAGCCATCCAGTCTGGTGTGTTGCTGCCCGGCCA
GCGCATGCCCTCGGTTCGGGCCCTGACCCGGTTGCATCAGGTCAGCCTGTCGACGGCTGTGGAGGCCTGCCATACGCTGG
AGGATGAAGGCTGGCTGGAAGCTCGGCCCCGTTCGGGCTACTTTGTGCTCAAGCGGCGCCGCGTGGACATCCAGCCGCCC
AGTGAGCCCGAGGCCGGCCGCAAGCTGGATCCGGCGCAGTATGTCGGCATCCATGACCGTGTCTCGGACTATGTGGCCAA
ATGCAATGTGTACCCCCTGGTCACCAACTTGGCCGCCGCACATGGCCCACCCGAGGTCTATCCCTCCGAGGCTCTGAAGA
ACGCGGCCACCCGGGCCTTGCGCAAGCATCCCCACCTACTCGTCAGCGCTGTGGATCTGCCCGGCGATTCACCGCTGAAG
ACGGTGCTGGCCCGGCGCGCGCTGGCCGCAGGCATGCAGTTGTCGGCCGAAGAGATTGTGGTGACGCACGGCTGTATTGA
AGCGCTCAACATCGCGCTGCGGGCGGTGGCGCAACCGGGTGACACCATCGCCGTCGAATCCCCGACCTATTACGGCTTGC
TGCAGGTCCTGGAAAGCCTGGGCCTGCGCGCGCTGGAGATTCCCACCAGTCCCAAGCTGGGCCTTTCCGTGGAAGCGCTG
GACCTCGCCTTCCAGACGCACGACAGGATCCGGGCCGTGGTGGTCATGCCCAATTTCCACAATCCGCTGGGCAGCGTGAT
GCCCGACGCCGAGAAGGAAAAACTGGTCGCGCTGTGCGAGCGCCAGCAGGTGGCGCTGATTGAAGACGACACCTACGGCG
CGCTGGGCCATGACGACATTCCACTGAAAGCCGCCAAGGCCTGGGACCGCAGCGGCTCGGTGATTCATTGTGCATCGCTG
CGCAAGATTTTGGCACCCGGCCTGCGCCTGGGCTGGATGGCCGGCGGGCGCTGGCAGGCCCGCATCCAGATGCTCAAGTA
CGCGCAGAGCCGCTCCAATGAGGCGCTTGCCCAGATCACCGTGGCCGAGTTCATGGCCTCCAGCGCCTACGACCGTCACA
TGGTCCGCCTGCGCCGCCTGCTCAATGTGCAGCGCGAGCAGATGGCCGACGCGATTGCGGCGCACTTCCCCGCGGGTACC
CGCTTGTCAGTGCCCAATGGCAGCATGATGCTGTGGGTTGAATTGCCGGCGGGAACCTCCGCGCAAGCCGTGTTCGACGC
CGCGATCCGGCAGGGCATACGGGTTGCGCCCGGCTCGATGTTTTCCAACTCCAGCCGCTTTGACCACTTCCTGCGCATCA
GTTGCGGCTCTCCGTTTTCCAGTGCGGCCGATCAGGCTCTGCGCAAACTGGCCGCCATCGTGTCGGTGCAGGTTCTGGAG
CCTCCGGTCTGA

Upstream 100 bases:

>100_bases
GGCCATTTATCCATCTGTTATGGTTCGATTTCGGCCCATCTGTGGCTGTGTCACTGCTGTCCCTTCACGGATCATCTGGT
TTTACGGTTTTATTTAGTTT

Downstream 100 bases:

>100_bases
ACGCGTGTTTATGCGGGGATGCGCATGGTTTTTGCCAAGCCTTTCATCAAGCCTTTTGCCAAGCCCTTTATTTTCTGATG
CAGGCAGCTATCGCTTTAAT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MGAQPLYLRLSSHYRQAIQSGVLLPGQRMPSVRALTRLHQVSLSTAVEACHTLEDEGWLEARPRSGYFVLKRRRVDIQPP
SEPEAGRKLDPAQYVGIHDRVSDYVAKCNVYPLVTNLAAAHGPPEVYPSEALKNAATRALRKHPHLLVSAVDLPGDSPLK
TVLARRALAAGMQLSAEEIVVTHGCIEALNIALRAVAQPGDTIAVESPTYYGLLQVLESLGLRALEIPTSPKLGLSVEAL
DLAFQTHDRIRAVVVMPNFHNPLGSVMPDAEKEKLVALCERQQVALIEDDTYGALGHDDIPLKAAKAWDRSGSVIHCASL
RKILAPGLRLGWMAGGRWQARIQMLKYAQSRSNEALAQITVAEFMASSAYDRHMVRLRRLLNVQREQMADAIAAHFPAGT
RLSVPNGSMMLWVELPAGTSAQAVFDAAIRQGIRVAPGSMFSNSSRFDHFLRISCGSPFSSAADQALRKLAAIVSVQVLE
PPV

Sequences:

>Translated_483_residues
MGAQPLYLRLSSHYRQAIQSGVLLPGQRMPSVRALTRLHQVSLSTAVEACHTLEDEGWLEARPRSGYFVLKRRRVDIQPP
SEPEAGRKLDPAQYVGIHDRVSDYVAKCNVYPLVTNLAAAHGPPEVYPSEALKNAATRALRKHPHLLVSAVDLPGDSPLK
TVLARRALAAGMQLSAEEIVVTHGCIEALNIALRAVAQPGDTIAVESPTYYGLLQVLESLGLRALEIPTSPKLGLSVEAL
DLAFQTHDRIRAVVVMPNFHNPLGSVMPDAEKEKLVALCERQQVALIEDDTYGALGHDDIPLKAAKAWDRSGSVIHCASL
RKILAPGLRLGWMAGGRWQARIQMLKYAQSRSNEALAQITVAEFMASSAYDRHMVRLRRLLNVQREQMADAIAAHFPAGT
RLSVPNGSMMLWVELPAGTSAQAVFDAAIRQGIRVAPGSMFSNSSRFDHFLRISCGSPFSSAADQALRKLAAIVSVQVLE
PPV
>Mature_482_residues
GAQPLYLRLSSHYRQAIQSGVLLPGQRMPSVRALTRLHQVSLSTAVEACHTLEDEGWLEARPRSGYFVLKRRRVDIQPPS
EPEAGRKLDPAQYVGIHDRVSDYVAKCNVYPLVTNLAAAHGPPEVYPSEALKNAATRALRKHPHLLVSAVDLPGDSPLKT
VLARRALAAGMQLSAEEIVVTHGCIEALNIALRAVAQPGDTIAVESPTYYGLLQVLESLGLRALEIPTSPKLGLSVEALD
LAFQTHDRIRAVVVMPNFHNPLGSVMPDAEKEKLVALCERQQVALIEDDTYGALGHDDIPLKAAKAWDRSGSVIHCASLR
KILAPGLRLGWMAGGRWQARIQMLKYAQSRSNEALAQITVAEFMASSAYDRHMVRLRRLLNVQREQMADAIAAHFPAGTR
LSVPNGSMMLWVELPAGTSAQAVFDAAIRQGIRVAPGSMFSNSSRFDHFLRISCGSPFSSAADQALRKLAAIVSVQVLEP
PV

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=313, Percent_Identity=23.3226837060703, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI33469970, Length=313, Percent_Identity=23.3226837060703, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI4507369, Length=161, Percent_Identity=26.7080745341615, Blast_Score=77, Evalue=4e-14,
Organism=Escherichia coli, GI1790797, Length=468, Percent_Identity=33.974358974359, Blast_Score=293, Evalue=2e-80,
Organism=Escherichia coli, GI1787710, Length=468, Percent_Identity=34.4017094017094, Blast_Score=279, Evalue=2e-76,
Organism=Caenorhabditis elegans, GI17567663, Length=314, Percent_Identity=23.5668789808917, Blast_Score=72, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6321000, Length=208, Percent_Identity=23.5576923076923, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 52626; Mature: 52495

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAQPLYLRLSSHYRQAIQSGVLLPGQRMPSVRALTRLHQVSLSTAVEACHTLEDEGWLE
CCCCCEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
ARPRSGYFVLKRRRVDIQPPSEPEAGRKLDPAQYVGIHDRVSDYVAKCNVYPLVTNLAAA
CCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHC
HGPPEVYPSEALKNAATRALRKHPHLLVSAVDLPGDSPLKTVLARRALAAGMQLSAEEIV
CCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHEE
VTHGCIEALNIALRAVAQPGDTIAVESPTYYGLLQVLESLGLRALEIPTSPKLGLSVEAL
HHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHH
DLAFQTHDRIRAVVVMPNFHNPLGSVMPDAEKEKLVALCERQQVALIEDDTYGALGHDDI
HHHHHCCCCEEEEEECCCCCCCHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
PLKAAKAWDRSGSVIHCASLRKILAPGLRLGWMAGGRWQARIQMLKYAQSRSNEALAQIT
CCHHHHHHCCCCCEEEHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHH
VAEFMASSAYDRHMVRLRRLLNVQREQMADAIAAHFPAGTRLSVPNGSMMLWVELPAGTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEECCCCCC
AQAVFDAAIRQGIRVAPGSMFSNSSRFDHFLRISCGSPFSSAADQALRKLAAIVSVQVLE
HHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC
PPV
CCC
>Mature Secondary Structure 
GAQPLYLRLSSHYRQAIQSGVLLPGQRMPSVRALTRLHQVSLSTAVEACHTLEDEGWLE
CCCCEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
ARPRSGYFVLKRRRVDIQPPSEPEAGRKLDPAQYVGIHDRVSDYVAKCNVYPLVTNLAAA
CCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHC
HGPPEVYPSEALKNAATRALRKHPHLLVSAVDLPGDSPLKTVLARRALAAGMQLSAEEIV
CCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHEE
VTHGCIEALNIALRAVAQPGDTIAVESPTYYGLLQVLESLGLRALEIPTSPKLGLSVEAL
HHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHH
DLAFQTHDRIRAVVVMPNFHNPLGSVMPDAEKEKLVALCERQQVALIEDDTYGALGHDDI
HHHHHCCCCEEEEEECCCCCCCHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
PLKAAKAWDRSGSVIHCASLRKILAPGLRLGWMAGGRWQARIQMLKYAQSRSNEALAQIT
CCHHHHHHCCCCCEEEHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHH
VAEFMASSAYDRHMVRLRRLLNVQREQMADAIAAHFPAGTRLSVPNGSMMLWVELPAGTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEECCCCCC
AQAVFDAAIRQGIRVAPGSMFSNSSRFDHFLRISCGSPFSSAADQALRKLAAIVSVQVLE
HHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC
PPV
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]