| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is cysW [H]
Identifier: 91788245
GI number: 91788245
Start: 2471657
End: 2472676
Strand: Direct
Name: cysW [H]
Synonym: Bpro_2378
Alternate gene names: 91788245
Gene position: 2471657-2472676 (Clockwise)
Preceding gene: 91788244
Following gene: 91788246
Centisome position: 47.53
GC content: 62.55
Gene sequence:
>1020_bases ATGAGCGATAAACAAGCCCCCACACTTGTCGCTACGCGAGCCTCCGGCGTTGCGCCGCCCCTTGCCGACAGAAAAGGGGC TGTGCTTGCTCGGGGCGGTCCTTCGCGGCGCACTCCTGCCCAACCGGTTCGCCGCGTCACGGCCGGAACGACTGAGTCGC CCTGGGTGCGTTACACGCTGATCACGGGTGCTCTTTTATTCGTGTTCCTGTTTCTCGTGCTGCCGCTGGCCGCCGTGTTC ACCGAAGCCTTGCGCAAGGGCTTGGGTGCCTACATCGCCGCGCTGCAGGAACCCGACGCCTGGTCGGCCATCAAGCTCAC CTTGATTGCCGCCGCCGTTGCCGTACCGCTGAATCTGGTGTTTGGCGTAGCCGCAGCCTGGGCCATTGCCAAGTACGAGT TTCGCGGCAAGTCGTTTTTGACGACCCTGGTGGACCTGCCGTTTTCCGTCTCGCCCGTGGTGGCAGGCCTGATCTATGTG CTGCTGTTTGGCGCCCAGGGCTGGTTTGGCCCCTGGCTGCAGGCGCATGACATCAAGATCATTTTTGCCGTGCCCGGCAT TGTGCTGGCGACCGTGTTCGTGACCTTTCCCTTCATTGCGCGCGAGCTGATTCCACTGATGCAGGCGCAGGGCAACGACG AAGAGCAGGCAGCCATTGTGCTGGGCGCCACCGGCTGGCAAACCTTCTGGCATGTCACGCTGCCCAACATCAAGTGGGGT TTGATCTACGGCGTGATCCTGTGCAATGCGCGGGCCATGGGCGAGTTTGGCGCGGTCTCCGTGGTGTCGGGCCACATCCG CGGGCAAACCAACACCTTGCCGCTGCATGTGGAAATTTTGTACAACGAATACCAGTCGGTGGCCGCCTTTGCCGTGGCTT CGCTGCTGGCCATTCTGGCGCTGGTCACGCTGGCCATCAAGTCGGTGGCGGAATGGCGCCACGAAGCAGAAATGAAGGCT GCGGCTGATTTGCCGCCTGAACGCCCCGTGTTATCCCCTCTCCCCCTGGGAGAGGGCTAG
Upstream 100 bases:
>100_bases CTACCGCAGTGGCCGTGGTGATGCTGGTGCTGTCATTCATCCTGCTGCTGGTCATCAACGCATTACAGGCCTGGCAGCGC CGCAACGCAGGAGCGCCGGC
Downstream 100 bases:
>100_bases GGTGAGGGCGCGGCCCCACCTCGTAGCCAACGCCGGCCCTCACCCCAACCCTCTCCCAGTGGGAGAGGGAGAAAGAGAAA GAGAAAGAAATGAGCATCGA
Product: Sulfate ABC transporter permease CysW
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSDKQAPTLVATRASGVAPPLADRKGAVLARGGPSRRTPAQPVRRVTAGTTESPWVRYTLITGALLFVFLFLVLPLAAVF TEALRKGLGAYIAALQEPDAWSAIKLTLIAAAVAVPLNLVFGVAAAWAIAKYEFRGKSFLTTLVDLPFSVSPVVAGLIYV LLFGAQGWFGPWLQAHDIKIIFAVPGIVLATVFVTFPFIARELIPLMQAQGNDEEQAAIVLGATGWQTFWHVTLPNIKWG LIYGVILCNARAMGEFGAVSVVSGHIRGQTNTLPLHVEILYNEYQSVAAFAVASLLAILALVTLAIKSVAEWRHEAEMKA AADLPPERPVLSPLPLGEG
Sequences:
>Translated_339_residues MSDKQAPTLVATRASGVAPPLADRKGAVLARGGPSRRTPAQPVRRVTAGTTESPWVRYTLITGALLFVFLFLVLPLAAVF TEALRKGLGAYIAALQEPDAWSAIKLTLIAAAVAVPLNLVFGVAAAWAIAKYEFRGKSFLTTLVDLPFSVSPVVAGLIYV LLFGAQGWFGPWLQAHDIKIIFAVPGIVLATVFVTFPFIARELIPLMQAQGNDEEQAAIVLGATGWQTFWHVTLPNIKWG LIYGVILCNARAMGEFGAVSVVSGHIRGQTNTLPLHVEILYNEYQSVAAFAVASLLAILALVTLAIKSVAEWRHEAEMKA AADLPPERPVLSPLPLGEG >Mature_338_residues SDKQAPTLVATRASGVAPPLADRKGAVLARGGPSRRTPAQPVRRVTAGTTESPWVRYTLITGALLFVFLFLVLPLAAVFT EALRKGLGAYIAALQEPDAWSAIKLTLIAAAVAVPLNLVFGVAAAWAIAKYEFRGKSFLTTLVDLPFSVSPVVAGLIYVL LFGAQGWFGPWLQAHDIKIIFAVPGIVLATVFVTFPFIARELIPLMQAQGNDEEQAAIVLGATGWQTFWHVTLPNIKWGL IYGVILCNARAMGEFGAVSVVSGHIRGQTNTLPLHVEILYNEYQSVAAFAVASLLAILALVTLAIKSVAEWRHEAEMKAA ADLPPERPVLSPLPLGEG
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=286, Percent_Identity=48.2517482517483, Blast_Score=285, Evalue=2e-78, Organism=Escherichia coli, GI1788764, Length=206, Percent_Identity=38.8349514563107, Blast_Score=148, Evalue=4e-37, Organism=Escherichia coli, GI1786980, Length=221, Percent_Identity=33.4841628959276, Blast_Score=93, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 36267; Mature: 36136
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKQAPTLVATRASGVAPPLADRKGAVLARGGPSRRTPAQPVRRVTAGTTESPWVRYTL CCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCEEEHHH ITGALLFVFLFLVLPLAAVFTEALRKGLGAYIAALQEPDAWSAIKLTLIAAAVAVPLNLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH FGVAAAWAIAKYEFRGKSFLTTLVDLPFSVSPVVAGLIYVLLFGAQGWFGPWLQAHDIKI HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE IFAVPGIVLATVFVTFPFIARELIPLMQAQGNDEEQAAIVLGATGWQTFWHVTLPNIKWG EEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCCHHH LIYGVILCNARAMGEFGAVSVVSGHIRGQTNTLPLHVEILYNEYQSVAAFAVASLLAILA HHHHHHHHCCHHCCCCCCHHEEECCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHH LVTLAIKSVAEWRHEAEMKAAADLPPERPVLSPLPLGEG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SDKQAPTLVATRASGVAPPLADRKGAVLARGGPSRRTPAQPVRRVTAGTTESPWVRYTL CCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCEEEHHH ITGALLFVFLFLVLPLAAVFTEALRKGLGAYIAALQEPDAWSAIKLTLIAAAVAVPLNLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH FGVAAAWAIAKYEFRGKSFLTTLVDLPFSVSPVVAGLIYVLLFGAQGWFGPWLQAHDIKI HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE IFAVPGIVLATVFVTFPFIARELIPLMQAQGNDEEQAAIVLGATGWQTFWHVTLPNIKWG EEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCCHHH LIYGVILCNARAMGEFGAVSVVSGHIRGQTNTLPLHVEILYNEYQSVAAFAVASLLAILA HHHHHHHHCCHHCCCCCCHHEEECCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHH LVTLAIKSVAEWRHEAEMKAAADLPPERPVLSPLPLGEG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]