| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is cysT [H]
Identifier: 91788244
GI number: 91788244
Start: 2470767
End: 2471660
Strand: Direct
Name: cysT [H]
Synonym: Bpro_2377
Alternate gene names: 91788244
Gene position: 2470767-2471660 (Clockwise)
Preceding gene: 91788243
Following gene: 91788245
Centisome position: 47.51
GC content: 62.64
Gene sequence:
>894_bases ATGACTTCCCTGTCTTCTGTTGCACCGCCCGCCGCGGTGCTGCCGGGCTCGCCTGCGGGCGGCAAACGGGCTGCCCGGCG GGTGTTGCCCGGCTTTTACCTCACGCTGGGCTACACGGTTTTGTACCTCAGCCTGATCGTGCTGATCCCGATCTCGGCGC TGTTCTTCAAAACGTTCACGCTCACCCTGGATCAGTTCTGGGTGGCCGTGACCTCGCCGCGCGTGCTGGCCTCCTACCGC CTCACGTTTGGCGCGTCGCTGATCGCGGCGCTCGTCAACCTGGTGTTCGGCCTGCTGGTGGCCTGGGTGCTGGTGCGCTA CACGTTTCCCGGCAAAAAACTGGTTGATGCGCTGGTTGATTTGCCCTTTGCGCTGCCCACGGCCGTGGCCGGCATTTCGC TCACAGCGCTGCTGGCGGGCAACGGCTGGCTCGGCCAGTACCTGGAGCCCATGGGCATCAAGCTGGCCTTCACGCCGGCC GGCGTGGTGATTGCGCTGATTTTTGTGGGTCTTCCGTTTGTCGTGCGCACGGTGCAGCCGGTGCTGGAAGATGCGGAGAA AGAACTCGAAGAAGCCGCAACGTCATTGGGCGCCACACGCCTGCAGATTTTCACCAGGGTCATCCTGCCGCACATCATGC CGGCGCTGCTGACGGGCTTTGCCATGGCCTTTGCGCGGGCGATTGGCGAGTACGGATCGGTTATCTTTATTGCCGGCAAC ATGCCCATGATTTCGGAGATCACGCCGCTCATCATCATCGGCAAGCTCGAGCAGTACGACTATGCTGGTGCTACCGCAGT GGCCGTGGTGATGCTGGTGCTGTCATTCATCCTGCTGCTGGTCATCAACGCATTACAGGCCTGGCAGCGCCGCAACGCAG GAGCGCCGGCATGA
Upstream 100 bases:
>100_bases TGCAGGAGTTGTTTGGCTCCCTGAGCGAAGCGCAAAAAGTCCACTTCAATGACGGCGGACAGTTCGACAAGCTTTACACC GTCAAGTAAGCCTCCACGCC
Downstream 100 bases:
>100_bases GCGATAAACAAGCCCCCACACTTGTCGCTACGCGAGCCTCCGGCGTTGCGCCGCCCCTTGCCGACAGAAAAGGGGCTGTG CTTGCTCGGGGCGGTCCTTC
Product: Sulfate ABC transporter permease CysT
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MTSLSSVAPPAAVLPGSPAGGKRAARRVLPGFYLTLGYTVLYLSLIVLIPISALFFKTFTLTLDQFWVAVTSPRVLASYR LTFGASLIAALVNLVFGLLVAWVLVRYTFPGKKLVDALVDLPFALPTAVAGISLTALLAGNGWLGQYLEPMGIKLAFTPA GVVIALIFVGLPFVVRTVQPVLEDAEKELEEAATSLGATRLQIFTRVILPHIMPALLTGFAMAFARAIGEYGSVIFIAGN MPMISEITPLIIIGKLEQYDYAGATAVAVVMLVLSFILLLVINALQAWQRRNAGAPA
Sequences:
>Translated_297_residues MTSLSSVAPPAAVLPGSPAGGKRAARRVLPGFYLTLGYTVLYLSLIVLIPISALFFKTFTLTLDQFWVAVTSPRVLASYR LTFGASLIAALVNLVFGLLVAWVLVRYTFPGKKLVDALVDLPFALPTAVAGISLTALLAGNGWLGQYLEPMGIKLAFTPA GVVIALIFVGLPFVVRTVQPVLEDAEKELEEAATSLGATRLQIFTRVILPHIMPALLTGFAMAFARAIGEYGSVIFIAGN MPMISEITPLIIIGKLEQYDYAGATAVAVVMLVLSFILLLVINALQAWQRRNAGAPA >Mature_296_residues TSLSSVAPPAAVLPGSPAGGKRAARRVLPGFYLTLGYTVLYLSLIVLIPISALFFKTFTLTLDQFWVAVTSPRVLASYRL TFGASLIAALVNLVFGLLVAWVLVRYTFPGKKLVDALVDLPFALPTAVAGISLTALLAGNGWLGQYLEPMGIKLAFTPAG VVIALIFVGLPFVVRTVQPVLEDAEKELEEAATSLGATRLQIFTRVILPHIMPALLTGFAMAFARAIGEYGSVIFIAGNM PMISEITPLIIIGKLEQYDYAGATAVAVVMLVLSFILLLVINALQAWQRRNAGAPA
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=272, Percent_Identity=49.6323529411765, Blast_Score=248, Evalue=4e-67, Organism=Escherichia coli, GI87082099, Length=276, Percent_Identity=35.1449275362319, Blast_Score=150, Evalue=7e-38, Organism=Escherichia coli, GI1786980, Length=216, Percent_Identity=34.7222222222222, Blast_Score=111, Evalue=6e-26, Organism=Escherichia coli, GI1787369, Length=181, Percent_Identity=30.939226519337, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786254, Length=223, Percent_Identity=25.5605381165919, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787368, Length=184, Percent_Identity=31.5217391304348, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31646; Mature: 31515
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLSSVAPPAAVLPGSPAGGKRAARRVLPGFYLTLGYTVLYLSLIVLIPISALFFKTFT CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLDQFWVAVTSPRVLASYRLTFGASLIAALVNLVFGLLVAWVLVRYTFPGKKLVDALVD HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LPFALPTAVAGISLTALLAGNGWLGQYLEPMGIKLAFTPAGVVIALIFVGLPFVVRTVQP CCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH VLEDAEKELEEAATSLGATRLQIFTRVILPHIMPALLTGFAMAFARAIGEYGSVIFIAGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC MPMISEITPLIIIGKLEQYDYAGATAVAVVMLVLSFILLLVINALQAWQRRNAGAPA CCHHHHCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TSLSSVAPPAAVLPGSPAGGKRAARRVLPGFYLTLGYTVLYLSLIVLIPISALFFKTFT CCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLDQFWVAVTSPRVLASYRLTFGASLIAALVNLVFGLLVAWVLVRYTFPGKKLVDALVD HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LPFALPTAVAGISLTALLAGNGWLGQYLEPMGIKLAFTPAGVVIALIFVGLPFVVRTVQP CCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH VLEDAEKELEEAATSLGATRLQIFTRVILPHIMPALLTGFAMAFARAIGEYGSVIFIAGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC MPMISEITPLIIIGKLEQYDYAGATAVAVVMLVLSFILLLVINALQAWQRRNAGAPA CCHHHHCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1708375 [H]