| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ywfA [H]
Identifier: 91788197
GI number: 91788197
Start: 2424032
End: 2425252
Strand: Reverse
Name: ywfA [H]
Synonym: Bpro_2328
Alternate gene names: 91788197
Gene position: 2425252-2424032 (Counterclockwise)
Preceding gene: 91788198
Following gene: 91788196
Centisome position: 46.64
GC content: 65.27
Gene sequence:
>1221_bases ATGACCACCGGTTCCGCCACCCTCTCCGCGGCTACGCGACGTTCCGTCCTGCTGCTGTCTTTTGCCACCTTCGCCAGCAT GGCGGCACAGCGTATTTGCGACGCGATGCTCCCCGAGCTTTCACGTACTTTTTCCGTGAGCCTGGCGCAGGCGGCGCAGG TGGTGTCGGTGTTTGCGGTGGTGTACGGCCTGGCACAGCTGTTTTATGGCCCGCTGGGCGACCGGCGGAGCAAGTTCGGC ATCGTCACTTTTGCCACGCTGTCGTGTTGCGCTGGCAGCCTCATGTCGGCTTTTGCTGTCAGCCTGGACATGCTGGTGCT GGCGCGTGTCATGGTGGCGCTGGGCGCGGCGGCCATTATTCCGCTGTCCATGGCATGGATCGGCGACACCGTCGCCTACG AGCTGCGCCAGGAAACGCTGGCACGCGTCGGCCTGGGCACCACGCTGGGTATTGTGTGTGGCCAGCTGGTGGGCGGCTTG TTGAGCGATACGCTGGGCTGGCGCTGGGCGTTCGGACTCATGACGTTGCTGTTCGGCGTGGTGGGATCGCTTCTCTTCAT CGACCGGCGCCGCCAGCAGGCCGAACGCCTGCCAACCACCAACACCGAACCCGTCGTGCGGCCCGGTTTTGTGGCGCAGG CCCTGATCATCATCACCGGACCGTGGTCGCGCATCGTGCTCGGGGTCGCTTTTGTCGAAGGCGCGGCAGGCTTCGGCGTG CTGGCCATCTGGGCGTCGCATCTGCACCAGGCGCTGGGCCTGTCGCTGTCGGCAGCTGGTGCCATTGTGGCGCTGTTCGG CCTGGGCGGCATGCTTTACATGGTGGTGGCGCGCCAGTTGATTCGGCGCTTGGGTGAACAGGGTTTGACCCTGCTGGGGG GCAGCCTGATGGGGCTGTCTGCGCTAGTGCTGGGCTTCACGCCGCACTGGTTACTCAGCCTTCCGGCATGCCTGCTGGCC GGTTTTGGCTTCTTCATGTTCCACAACACCATGCAGACCAATGCCACGCAGATGGCGCCTAAGGCACGCGGCACAGGCGT GTCCCTGTTCGCCTCGGCACTGTTCATGGGCCAGTCGGTGGGCGTGCTGCTGGCCGCCGGCCTGGTGGACCGCATCGGCT CCGGCGCCGTGATTGCGCTCGGAGGCGGCGTGTTGGTGAGCATTGGTATTTTCTTCGCGCGGGCATTGCGCCGGCGTGAG GAGTTGATGCGCCTGCAGTGA
Upstream 100 bases:
>100_bases GGGTCAGCGCTGCCTACGCTGCCTACAATCGACCGGCACAGACGTCAGGCTCCAGCCCGTACTGAACTGGCACACCCGAT CAGCCTGACTTCATCCATCC
Downstream 100 bases:
>100_bases GTGCTGGAGGACATTCGCTGCGCCACTTGGGATAGATTGGTATGCCCGTTTTTTTAACGCAAAATCCAAATCCTGTTGCC CCCGTCACCTCGGCTTGAGC
Product: major facilitator transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MTTGSATLSAATRRSVLLLSFATFASMAAQRICDAMLPELSRTFSVSLAQAAQVVSVFAVVYGLAQLFYGPLGDRRSKFG IVTFATLSCCAGSLMSAFAVSLDMLVLARVMVALGAAAIIPLSMAWIGDTVAYELRQETLARVGLGTTLGIVCGQLVGGL LSDTLGWRWAFGLMTLLFGVVGSLLFIDRRRQQAERLPTTNTEPVVRPGFVAQALIIITGPWSRIVLGVAFVEGAAGFGV LAIWASHLHQALGLSLSAAGAIVALFGLGGMLYMVVARQLIRRLGEQGLTLLGGSLMGLSALVLGFTPHWLLSLPACLLA GFGFFMFHNTMQTNATQMAPKARGTGVSLFASALFMGQSVGVLLAAGLVDRIGSGAVIALGGGVLVSIGIFFARALRRRE ELMRLQ
Sequences:
>Translated_406_residues MTTGSATLSAATRRSVLLLSFATFASMAAQRICDAMLPELSRTFSVSLAQAAQVVSVFAVVYGLAQLFYGPLGDRRSKFG IVTFATLSCCAGSLMSAFAVSLDMLVLARVMVALGAAAIIPLSMAWIGDTVAYELRQETLARVGLGTTLGIVCGQLVGGL LSDTLGWRWAFGLMTLLFGVVGSLLFIDRRRQQAERLPTTNTEPVVRPGFVAQALIIITGPWSRIVLGVAFVEGAAGFGV LAIWASHLHQALGLSLSAAGAIVALFGLGGMLYMVVARQLIRRLGEQGLTLLGGSLMGLSALVLGFTPHWLLSLPACLLA GFGFFMFHNTMQTNATQMAPKARGTGVSLFASALFMGQSVGVLLAAGLVDRIGSGAVIALGGGVLVSIGIFFARALRRRE ELMRLQ >Mature_405_residues TTGSATLSAATRRSVLLLSFATFASMAAQRICDAMLPELSRTFSVSLAQAAQVVSVFAVVYGLAQLFYGPLGDRRSKFGI VTFATLSCCAGSLMSAFAVSLDMLVLARVMVALGAAAIIPLSMAWIGDTVAYELRQETLARVGLGTTLGIVCGQLVGGLL SDTLGWRWAFGLMTLLFGVVGSLLFIDRRRQQAERLPTTNTEPVVRPGFVAQALIIITGPWSRIVLGVAFVEGAAGFGVL AIWASHLHQALGLSLSAAGAIVALFGLGGMLYMVVARQLIRRLGEQGLTLLGGSLMGLSALVLGFTPHWLLSLPACLLAG FGFFMFHNTMQTNATQMAPKARGTGVSLFASALFMGQSVGVLLAAGLVDRIGSGAVIALGGGVLVSIGIFFARALRRREE LMRLQ
Specific function: Translocase That Confers Resistance To Substances Of High Hydrophobicity. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1789042, Length=153, Percent_Identity=26.797385620915, Blast_Score=65, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42622; Mature: 42491
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGSATLSAATRRSVLLLSFATFASMAAQRICDAMLPELSRTFSVSLAQAAQVVSVFAV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYGLAQLFYGPLGDRRSKFGIVTFATLSCCAGSLMSAFAVSLDMLVLARVMVALGAAAII HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLSMAWIGDTVAYELRQETLARVGLGTTLGIVCGQLVGGLLSDTLGWRWAFGLMTLLFGV HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGSLLFIDRRRQQAERLPTTNTEPVVRPGFVAQALIIITGPWSRIVLGVAFVEGAAGFGV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEHHEEECCHHHHHHHHHHHHCCCCHHH LAIWASHLHQALGLSLSAAGAIVALFGLGGMLYMVVARQLIRRLGEQGLTLLGGSLMGLS HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ALVLGFTPHWLLSLPACLLAGFGFFMFHNTMQTNATQMAPKARGTGVSLFASALFMGQSV HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCHH GVLLAAGLVDRIGSGAVIALGGGVLVSIGIFFARALRRREELMRLQ HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTGSATLSAATRRSVLLLSFATFASMAAQRICDAMLPELSRTFSVSLAQAAQVVSVFAV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYGLAQLFYGPLGDRRSKFGIVTFATLSCCAGSLMSAFAVSLDMLVLARVMVALGAAAII HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLSMAWIGDTVAYELRQETLARVGLGTTLGIVCGQLVGGLLSDTLGWRWAFGLMTLLFGV HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGSLLFIDRRRQQAERLPTTNTEPVVRPGFVAQALIIITGPWSRIVLGVAFVEGAAGFGV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEHHEEECCHHHHHHHHHHHHCCCCHHH LAIWASHLHQALGLSLSAAGAIVALFGLGGMLYMVVARQLIRRLGEQGLTLLGGSLMGLS HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ALVLGFTPHWLLSLPACLLAGFGFFMFHNTMQTNATQMAPKARGTGVSLFASALFMGQSV HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCHH GVLLAAGLVDRIGSGAVIALGGGVLVSIGIFFARALRRREELMRLQ HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]