| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788196
Identifier: 91788196
GI number: 91788196
Start: 2422665
End: 2423762
Strand: Reverse
Name: 91788196
Synonym: Bpro_2327
Alternate gene names: NA
Gene position: 2423762-2422665 (Counterclockwise)
Preceding gene: 91788197
Following gene: 91788195
Centisome position: 46.61
GC content: 60.66
Gene sequence:
>1098_bases ATGGACATCCTCCTTAAGCCTCGAAACCTCAGCGCTGGCTTGCTGATCGCCGCAGTCAGTCTATTTTCTGCTTCCAGTAT TGCATCGCCGCCGTCCACCATCGACGAAAGACAGATCTTCGCCTCGCAACTTTCGATAGCGCAGCAAGATGACTGGGGGG GAGCTGTGCTGGACGACGCCACAGCCGTGGCGGTGGCGCCGGATACCACCGGGGCTCCCGCTGCGCTGCCAGCAGCCGAT GAGCCACGCGCGCCTGCAGACGAAGTACCTGTTGCAGCAGAACCCGTACCCGCGCAGCCTGCCGTGCTCAATCAAAAAAC CACACGCTTTCGCACGGCAGCGCTGATGGCCGCCAGCATCGGCGGAACGCTGGCCTACGGGCGGGCCAAGTGGTGGCAAG ACGGGTTCGCCGGTGGCTTCAAGACCGTCAATGAAGGCTGGTTCGGCCAGGACACGAACTATGGAGGCGCCGACAAGCTC GGCCATGCCATGTTTGCCTACACCGGTACCCGGTTGTTGACGCGGGCCTTCGAATGGGCGGGAAACGATTCAGCAACCGC CCTGAAGCTGGGCCTATGGACATCGGTAGGCACCTTGATGGGGGTTGAGCTGATCGACGGCTTTTCCAAAAAATGGCGCT TCTCAAAAGAAGATGCCGTGGCTAATCTTGCAGGCGGCGCACTGGCCTATCTGATGGAGCGGAACCCCGAGCTGGACGCG CTGATCGACCTGCGACTTCAATACAGCTCGCCGTCAGGAGGACACAAATTCGATCCGTTTGGCGACTACTCCAGCCAGCG CTACCTGCTGGTGCTCAAGGCCAGCGGCGTGCCGGCATTCAAGCAGCACCCGCTTCTCAAGTACCTTGAGATTAACCTCG GCTACGGAGCGCGCAACTTCGACACGAACTCGCGTGCGCTGATGCCACCGACCCGCCACGCCTACTTCGGCATATCACTC AATCTGTCGGAACTGCTGCGCAACACGGTTTACAAGGGCAACGCCAGTCCCTCGCGTACCCAGCGCGTGACCGAGACCTT CTTCGAGTTCATGCAAATCCCGGCTGCCACGATGCAGGCCGATCACGTCATCCGTTGA
Upstream 100 bases:
>100_bases TTCCGTGCGGGCCATTGTTTTATATTGGCTCCCACACAGGAATAGCTGAAATTACACTGAGACTCATAATCCCTGCAGGC AATTAACAAGGACTAGCGGT
Downstream 100 bases:
>100_bases TTGGGTGATGGAGTTCTCGAACTTTACGTTGGTACGGCTGGCAAGGAGCAGGTCAAGCGATACTGACGCCAATGAGGCGG ACTTTTTCGCGCAGGTAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MDILLKPRNLSAGLLIAAVSLFSASSIASPPSTIDERQIFASQLSIAQQDDWGGAVLDDATAVAVAPDTTGAPAALPAAD EPRAPADEVPVAAEPVPAQPAVLNQKTTRFRTAALMAASIGGTLAYGRAKWWQDGFAGGFKTVNEGWFGQDTNYGGADKL GHAMFAYTGTRLLTRAFEWAGNDSATALKLGLWTSVGTLMGVELIDGFSKKWRFSKEDAVANLAGGALAYLMERNPELDA LIDLRLQYSSPSGGHKFDPFGDYSSQRYLLVLKASGVPAFKQHPLLKYLEINLGYGARNFDTNSRALMPPTRHAYFGISL NLSELLRNTVYKGNASPSRTQRVTETFFEFMQIPAATMQADHVIR
Sequences:
>Translated_365_residues MDILLKPRNLSAGLLIAAVSLFSASSIASPPSTIDERQIFASQLSIAQQDDWGGAVLDDATAVAVAPDTTGAPAALPAAD EPRAPADEVPVAAEPVPAQPAVLNQKTTRFRTAALMAASIGGTLAYGRAKWWQDGFAGGFKTVNEGWFGQDTNYGGADKL GHAMFAYTGTRLLTRAFEWAGNDSATALKLGLWTSVGTLMGVELIDGFSKKWRFSKEDAVANLAGGALAYLMERNPELDA LIDLRLQYSSPSGGHKFDPFGDYSSQRYLLVLKASGVPAFKQHPLLKYLEINLGYGARNFDTNSRALMPPTRHAYFGISL NLSELLRNTVYKGNASPSRTQRVTETFFEFMQIPAATMQADHVIR >Mature_365_residues MDILLKPRNLSAGLLIAAVSLFSASSIASPPSTIDERQIFASQLSIAQQDDWGGAVLDDATAVAVAPDTTGAPAALPAAD EPRAPADEVPVAAEPVPAQPAVLNQKTTRFRTAALMAASIGGTLAYGRAKWWQDGFAGGFKTVNEGWFGQDTNYGGADKL GHAMFAYTGTRLLTRAFEWAGNDSATALKLGLWTSVGTLMGVELIDGFSKKWRFSKEDAVANLAGGALAYLMERNPELDA LIDLRLQYSSPSGGHKFDPFGDYSSQRYLLVLKASGVPAFKQHPLLKYLEINLGYGARNFDTNSRALMPPTRHAYFGISL NLSELLRNTVYKGNASPSRTQRVTETFFEFMQIPAATMQADHVIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39341; Mature: 39341
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILLKPRNLSAGLLIAAVSLFSASSIASPPSTIDERQIFASQLSIAQQDDWGGAVLDDA CCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCC TAVAVAPDTTGAPAALPAADEPRAPADEVPVAAEPVPAQPAVLNQKTTRFRTAALMAASI EEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHC GGTLAYGRAKWWQDGFAGGFKTVNEGWFGQDTNYGGADKLGHAMFAYTGTRLLTRAFEWA CCEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GNDSATALKLGLWTSVGTLMGVELIDGFSKKWRFSKEDAVANLAGGALAYLMERNPELDA CCCCCEEEEEEHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCCCE LIDLRLQYSSPSGGHKFDPFGDYSSQRYLLVLKASGVPAFKQHPLLKYLEINLGYGARNF EEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHCCCEEEEEEEECCCCCCC DTNSRALMPPTRHAYFGISLNLSELLRNTVYKGNASPSRTQRVTETFFEFMQIPAATMQA CCCCCEECCCCCCEEEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHCC DHVIR CCCCC >Mature Secondary Structure MDILLKPRNLSAGLLIAAVSLFSASSIASPPSTIDERQIFASQLSIAQQDDWGGAVLDDA CCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCC TAVAVAPDTTGAPAALPAADEPRAPADEVPVAAEPVPAQPAVLNQKTTRFRTAALMAASI EEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHC GGTLAYGRAKWWQDGFAGGFKTVNEGWFGQDTNYGGADKLGHAMFAYTGTRLLTRAFEWA CCEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GNDSATALKLGLWTSVGTLMGVELIDGFSKKWRFSKEDAVANLAGGALAYLMERNPELDA CCCCCEEEEEEHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCCCE LIDLRLQYSSPSGGHKFDPFGDYSSQRYLLVLKASGVPAFKQHPLLKYLEINLGYGARNF EEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHCCCEEEEEEEECCCCCCC DTNSRALMPPTRHAYFGISLNLSELLRNTVYKGNASPSRTQRVTETFFEFMQIPAATMQA CCCCCEECCCCCCEEEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHCC DHVIR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA