| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is aat
Identifier: 91788195
GI number: 91788195
Start: 2421239
End: 2422006
Strand: Reverse
Name: aat
Synonym: Bpro_2326
Alternate gene names: 91788195
Gene position: 2422006-2421239 (Counterclockwise)
Preceding gene: 91788196
Following gene: 91788194
Centisome position: 46.57
GC content: 57.16
Gene sequence:
>768_bases ATGGGAAAACTGCCGCGCCCCGTACCCTGGCTTGCCGCCGGGGAGAATTTTCCTCCGCTGGAATTCGCTTGGGGGCGTCA CGACCCTGCCCCCGGTCTGTTAGCCGCTGGCGCGGCGCTTGATGTGCCAACGTTGATTCAAGCTTATTCGCGCGGAATTT TCCCCTGGTTTAGTCTGGGCCAGCCGGTGCTCTGGTGGAGCCCAGACCCTCGGATGGTGCTGCATACCGAAAAATTCAAG CTGCATAGATCCCTGCGCAAAAGCCTGATTCATTTTCTGGACGATCCGGAATGCGAAATAAAGTTTGACAGTGCCTTTGA GCATGTCATCAAAGCCTGCGCCAGCCAACCCCGTGCGGGCCAGCCGGGCACCTGGATTGTTCCGGATATGGTGCAAGCCT ACAGCAGCCTGCATCGGGCCGGGTATGCCCACAGTGTAGAAACATGGGTGCGCGGCAAGCTGGTAGGAGGTCTGTATTGC GTGAAATTGGGACGAATGGTATTTGGCGAATCCATGTTCGCCCATCAGACCGACGCCTCCAAGATTGCATTGGCTGCGCT TGTGGGTTTTTGCCGTGCCCACCAGATCGCCATGATTGACTGCCAGCAAAACACCCGCCATTTGGCCTCGCTCGGCGCGG CTGAAATTGATCGCGCGGACTTCGTGAGGCATCTGGCTCAAAACGTGGAGAAAACCACTCCCCCCTGGCAATTTGAACCC GTATACTGGAAACAGATACTGACGGCTGAAAAGCCGACGCTACCGTGA
Upstream 100 bases:
>100_bases CAATCCACCGCGCCCACTCAAAGCTGCCAGCTCAGCTACCATCTGTGGATGTCTCTCCTGAAACATTTTTAAAGCTCTGA TGTTGCCAAGATTTTGAGCC
Downstream 100 bases:
>100_bases CGCACCTCAAAGATCTGCCTCTGCAAACCTTGCAGTTTTATGCAACAGCGCCCTATCCCTGCAGCTATCTGCCGGGGAAG CAGGCCCGCTCTCAGGTTGC
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MGKLPRPVPWLAAGENFPPLEFAWGRHDPAPGLLAAGAALDVPTLIQAYSRGIFPWFSLGQPVLWWSPDPRMVLHTEKFK LHRSLRKSLIHFLDDPECEIKFDSAFEHVIKACASQPRAGQPGTWIVPDMVQAYSSLHRAGYAHSVETWVRGKLVGGLYC VKLGRMVFGESMFAHQTDASKIALAALVGFCRAHQIAMIDCQQNTRHLASLGAAEIDRADFVRHLAQNVEKTTPPWQFEP VYWKQILTAEKPTLP
Sequences:
>Translated_255_residues MGKLPRPVPWLAAGENFPPLEFAWGRHDPAPGLLAAGAALDVPTLIQAYSRGIFPWFSLGQPVLWWSPDPRMVLHTEKFK LHRSLRKSLIHFLDDPECEIKFDSAFEHVIKACASQPRAGQPGTWIVPDMVQAYSSLHRAGYAHSVETWVRGKLVGGLYC VKLGRMVFGESMFAHQTDASKIALAALVGFCRAHQIAMIDCQQNTRHLASLGAAEIDRADFVRHLAQNVEKTTPPWQFEP VYWKQILTAEKPTLP >Mature_254_residues GKLPRPVPWLAAGENFPPLEFAWGRHDPAPGLLAAGAALDVPTLIQAYSRGIFPWFSLGQPVLWWSPDPRMVLHTEKFKL HRSLRKSLIHFLDDPECEIKFDSAFEHVIKACASQPRAGQPGTWIVPDMVQAYSSLHRAGYAHSVETWVRGKLVGGLYCV KLGRMVFGESMFAHQTDASKIALAALVGFCRAHQIAMIDCQQNTRHLASLGAAEIDRADFVRHLAQNVEKTTPPWQFEPV YWKQILTAEKPTLP
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family
Homologues:
Organism=Escherichia coli, GI1787111, Length=196, Percent_Identity=45.4081632653061, Blast_Score=165, Evalue=3e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LFTR_POLSJ (Q12B43)
Other databases:
- EMBL: CP000316 - RefSeq: YP_549147.1 - ProteinModelPortal: Q12B43 - SMR: Q12B43 - STRING: Q12B43 - GeneID: 4015016 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_2326 - NMPDR: fig|296591.1.peg.3750 - eggNOG: COG2360 - HOGENOM: HBG485363 - OMA: GEPILWW - PhylomeDB: Q12B43 - ProtClustDB: PRK00301 - BioCyc: PSP296591:BPRO_2326-MONOMER - GO: GO:0005737 - HAMAP: MF_00688 - InterPro: IPR016181 - InterPro: IPR004616 - TIGRFAMs: TIGR00667
Pfam domain/function: PF03588 Leu_Phe_trans; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.6
Molecular weight: Translated: 28528; Mature: 28397
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKLPRPVPWLAAGENFPPLEFAWGRHDPAPGLLAAGAALDVPTLIQAYSRGIFPWFSLG CCCCCCCCCCEECCCCCCCCCEECCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCHHHCC QPVLWWSPDPRMVLHTEKFKLHRSLRKSLIHFLDDPECEIKFDSAFEHVIKACASQPRAG CCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCC QPGTWIVPDMVQAYSSLHRAGYAHSVETWVRGKLVGGLYCVKLGRMVFGESMFAHQTDAS CCCCEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHH KIALAALVGFCRAHQIAMIDCQQNTRHLASLGAAEIDRADFVRHLAQNVEKTTPPWQFEP HHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCHHHCCHHHHHHHHHHHHHHCCCCCCCCH VYWKQILTAEKPTLP HHHHHHHHCCCCCCC >Mature Secondary Structure GKLPRPVPWLAAGENFPPLEFAWGRHDPAPGLLAAGAALDVPTLIQAYSRGIFPWFSLG CCCCCCCCCEECCCCCCCCCEECCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCHHHCC QPVLWWSPDPRMVLHTEKFKLHRSLRKSLIHFLDDPECEIKFDSAFEHVIKACASQPRAG CCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCC QPGTWIVPDMVQAYSSLHRAGYAHSVETWVRGKLVGGLYCVKLGRMVFGESMFAHQTDAS CCCCEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHH KIALAALVGFCRAHQIAMIDCQQNTRHLASLGAAEIDRADFVRHLAQNVEKTTPPWQFEP HHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCHHHCCHHHHHHHHHHHHHHCCCCCCCCH VYWKQILTAEKPTLP HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA