| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ate
Identifier: 91788194
GI number: 91788194
Start: 2420478
End: 2421242
Strand: Reverse
Name: ate
Synonym: Bpro_2325
Alternate gene names: 91788194
Gene position: 2421242-2420478 (Counterclockwise)
Preceding gene: 91788195
Following gene: 91788193
Centisome position: 46.56
GC content: 55.82
Gene sequence:
>765_bases GTGACGCACCTCAAAGATCTGCCTCTGCAAACCTTGCAGTTTTATGCAACAGCGCCCTATCCCTGCAGCTATCTGCCGGG GAAGCAGGCCCGCTCTCAGGTTGCCACGCCCAGTCACCTGATCCACAACGACGCCTACTCGGAGCTTGTGACCAACGGGT TTCGGCGTAGTGGCATGTTCACCTATCGCCCTTATTGCGACGGATGCCAAGCCTGCGTTCCACTTCGTGTACCGGTCAAG AGCTTTAAGGCAGATCGCAGCCAGCGTCGCGCGTGGAGCCGCCATCAAGGAATGCAGGCTCGCGTGCTCAAACTGTGTTT CATGCCGGAGCACTACCAGCTCTATCTGCGCTATCAGAACGGCAGGCATGCAGGCGGGGGAATGGACCATGACAGCATCG ATCAGTACACGCAATTCCTGCTGCAAAGCCGCGTGAATTCGCGGCTCGTGGAGTTTCGGGAAAGTCTGCCCAATGGTGAG GCAGGCGCACTGAAGATGGTCTCAATTCTTGACGTGCTGGAAGACGGCATCTCGGCGGTTTATACGTTTTATGAACCGGA CACCCGAGCCAGCTACGGCAATTACAGCGTACTTTGGCAAATAGAGCAGGCCAGGAGACTGGAGCTGCCTTACGTATATT TGGGCTACTGGATAGCTCAAAGTCCAAAGATGAACTACAAGGCCGGATTCAAGCCGCACGAAATACTCGTGAATGGTCAG TGGACTCCCTCTGATGCGGCTACCCGGCGACCTAAAACGGACTGA
Upstream 100 bases:
>100_bases TGAGGCATCTGGCTCAAAACGTGGAGAAAACCACTCCCCCCTGGCAATTTGAACCCGTATACTGGAAACAGATACTGACG GCTGAAAAGCCGACGCTACC
Downstream 100 bases:
>100_bases CCTGGCCAAAGGAAATACAACCGGACACCAGCAAACAAAATCAGCAGATGCATTGTGATTTCATAGCGTAAAATTTAATG CGTATAGTCTGCACATGAAA
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTHLKDLPLQTLQFYATAPYPCSYLPGKQARSQVATPSHLIHNDAYSELVTNGFRRSGMFTYRPYCDGCQACVPLRVPVK SFKADRSQRRAWSRHQGMQARVLKLCFMPEHYQLYLRYQNGRHAGGGMDHDSIDQYTQFLLQSRVNSRLVEFRESLPNGE AGALKMVSILDVLEDGISAVYTFYEPDTRASYGNYSVLWQIEQARRLELPYVYLGYWIAQSPKMNYKAGFKPHEILVNGQ WTPSDAATRRPKTD
Sequences:
>Translated_254_residues MTHLKDLPLQTLQFYATAPYPCSYLPGKQARSQVATPSHLIHNDAYSELVTNGFRRSGMFTYRPYCDGCQACVPLRVPVK SFKADRSQRRAWSRHQGMQARVLKLCFMPEHYQLYLRYQNGRHAGGGMDHDSIDQYTQFLLQSRVNSRLVEFRESLPNGE AGALKMVSILDVLEDGISAVYTFYEPDTRASYGNYSVLWQIEQARRLELPYVYLGYWIAQSPKMNYKAGFKPHEILVNGQ WTPSDAATRRPKTD >Mature_253_residues THLKDLPLQTLQFYATAPYPCSYLPGKQARSQVATPSHLIHNDAYSELVTNGFRRSGMFTYRPYCDGCQACVPLRVPVKS FKADRSQRRAWSRHQGMQARVLKLCFMPEHYQLYLRYQNGRHAGGGMDHDSIDQYTQFLLQSRVNSRLVEFRESLPNGEA GALKMVSILDVLEDGISAVYTFYEPDTRASYGNYSVLWQIEQARRLELPYVYLGYWIAQSPKMNYKAGFKPHEILVNGQW TPSDAATRRPKTD
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential)
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family
Homologues:
Organism=Homo sapiens, GI50345877, Length=155, Percent_Identity=32.258064516129, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI50345875, Length=151, Percent_Identity=30.4635761589404, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATE_POLSJ (Q12B44)
Other databases:
- EMBL: CP000316 - RefSeq: YP_549146.1 - STRING: Q12B44 - GeneID: 4015015 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_2325 - NMPDR: fig|296591.1.peg.3751 - eggNOG: COG2935 - HOGENOM: HBG651116 - OMA: PQFYLTA - ProtClustDB: PRK01305 - BioCyc: PSP296591:BPRO_2325-MONOMER - GO: GO:0005737 - GO: GO:0006412 - HAMAP: MF_00689 - InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 - PIRSF: PIRSF037208
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.8
Molecular weight: Translated: 29219; Mature: 29087
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHLKDLPLQTLQFYATAPYPCSYLPGKQARSQVATPSHLIHNDAYSELVTNGFRRSGMF CCCCCCCCHHHHHHEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCE TYRPYCDGCQACVPLRVPVKSFKADRSQRRAWSRHQGMQARVLKLCFMPEHYQLYLRYQN EECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEECC GRHAGGGMDHDSIDQYTQFLLQSRVNSRLVEFRESLPNGEAGALKMVSILDVLEDGISAV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHE YTFYEPDTRASYGNYSVLWQIEQARRLELPYVYLGYWIAQSPKMNYKAGFKPHEILVNGQ EEEECCCCCCCCCCEEEEEEECHHHHCCCCEEEEEHHHHCCCCCCCCCCCCCCEEEEECC WTPSDAATRRPKTD CCCCHHHCCCCCCC >Mature Secondary Structure THLKDLPLQTLQFYATAPYPCSYLPGKQARSQVATPSHLIHNDAYSELVTNGFRRSGMF CCCCCCCHHHHHHEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCE TYRPYCDGCQACVPLRVPVKSFKADRSQRRAWSRHQGMQARVLKLCFMPEHYQLYLRYQN EECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEECC GRHAGGGMDHDSIDQYTQFLLQSRVNSRLVEFRESLPNGEAGALKMVSILDVLEDGISAV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHE YTFYEPDTRASYGNYSVLWQIEQARRLELPYVYLGYWIAQSPKMNYKAGFKPHEILVNGQ EEEECCCCCCCCCCEEEEEEECHHHHCCCCEEEEEHHHHCCCCCCCCCCCCCCEEEEECC WTPSDAATRRPKTD CCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA