| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ppx [H]
Identifier: 91788120
GI number: 91788120
Start: 2335539
End: 2337038
Strand: Reverse
Name: ppx [H]
Synonym: Bpro_2249
Alternate gene names: 91788120
Gene position: 2337038-2335539 (Counterclockwise)
Preceding gene: 91788121
Following gene: 91788119
Centisome position: 44.94
GC content: 62.2
Gene sequence:
>1500_bases ATGCAAAACGGAACACTGCTCGCGGCTGTAGATCTGGGATCCAACAGTTTTCGCCTTGAAATTGGCCGCCTTGATCATGG CCGGGTCCACCGCACGGAATACATCAAGGAAACGGTCCGCCAGGGCAACGGACTGGACGGCGACCGCAACCTGACGCCGG ACGCCATGCAGCGCGGCTGGGACTGCCTGGCCCGCTTCGCCGAACGGCTGGCCGGGTTCAAAAAAACGCAGGTCAGGGCC GTCGCCACGCAAACCTTGCGGGAGGCACGCAACCGGGAAGAATTTCTGGCGCAGGCCTTCCGGATTCTGGAATTCCCCAT TGATGTCATTTCAGGCAGCGAAGAAGCCCGACTGATTTACCAGGGTGTGGCCCATCTGCTGCCCCAGTCGGATGAGCGCC GGCTGGTTGTGGACATTGGGGGCCGCTCCACAGAAATGATCCTGGGCAAGGGCTTCGATGCACGCACGATGGAGTCCTAC CGCGTCGGCAGCGTGGCTTGGTCCATGAAGTACTTTCCGGACGGCCAGTTCACGCCGCGGGCTTTCGAGATGGCTGAAAT TGCGGCCAAAGCGGTGCTTGATGAAGCGGTCAATGCCTACCAGCCGGGCGTCTGGGATGTCGCCTATGGTTCGTCCGGCA CGATTGGCGCCGTCAGCGATGTACTGACTGCCGCGGGCTGGCCTGCCGGCCTTGTCACGCGTGATGGCCTCGACTGGCTG CTCGATCGCCTGCTCAAGGCGCAACATGCCGACCGCGTGAAGCTCGACGGCATGAAAGATGACCGGCGCGCCGTCATTGG CGGTGGCGTCAGCGTGCTGAGGGCTGTGTTCGGGCTGCTGGGCATTGAACAGATGGAAGCCGCCCAGGGCGCGCTGCGCC ACGGCGTTCTTTATGACCTCCTCGACCGGGAGCAGGACTCCACCGATTTGCGCTCAACCAGCGTCCAGCGCCTGGCGAGC AAATTCAACTCAGATGCAGCACAGGCCCAGCGGGTCAGCAGAGTTTCGCAGCACCTGTTCCGGATGGCTGGCGCAGGCCT CCCAGGCGAGGCACTGGAGCGTTTCCAGCGCAAGCTGCAGTGGGCTGCGCAGCTTCATGAGATTGGCAGCCAGATTTCAC ACAGCGACTACCACAAGCATGGCGCCTATATTCTGGACAACGCCGACGCGCCCGGTTTTGCGCTCCCCGAGCTGCACCGG CTGAGCCTGCTCGTGCTGGGTCATCGCGGGAAACTGCGCAAGCTGGAAGTTGACTTCGAAGACCGGGTGTTTGTCCAGCA ACTGCTGTGCCTGCGCATGGCGGTCATTTTGTGCCACGCCCGGCGAGACCCTGACCTCAAGGGACTGCAACTCGAATGCA GCGCGGAACCCGGCAGGATTTTTGTGCTGAACTGCAGGCCGGGCTGGGCTGAAGCCTTTCCTCAATCGGCGCACTTGCTG CGCGAAGAAGTGCTGGCCTGGCAAAAAACGCCATGGACCCTGATTGTCTCCGGTCTGTAG
Upstream 100 bases:
>100_bases ACGATAGATGGCCGGCTGATTGGCTAAGCAGCAGGAATGCCGGGGTGAGTGCCGATGCCCGCGTGAATGCTATGCTGGGC CCGGACAAAGAAACTCAGAC
Downstream 100 bases:
>100_bases ACAGCAGGAACCCTGTGGCAGCCAGGAGGCTTGACGGTTCATTTTCAAACGATATAAACTATATATACGGTTTATATCGT TTATTGAAAAGGACATTCTC
Product: Ppx/GppA phosphatase
Products: NA
Alternate protein names: ExopolyPase; Metaphosphatase [H]
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MQNGTLLAAVDLGSNSFRLEIGRLDHGRVHRTEYIKETVRQGNGLDGDRNLTPDAMQRGWDCLARFAERLAGFKKTQVRA VATQTLREARNREEFLAQAFRILEFPIDVISGSEEARLIYQGVAHLLPQSDERRLVVDIGGRSTEMILGKGFDARTMESY RVGSVAWSMKYFPDGQFTPRAFEMAEIAAKAVLDEAVNAYQPGVWDVAYGSSGTIGAVSDVLTAAGWPAGLVTRDGLDWL LDRLLKAQHADRVKLDGMKDDRRAVIGGGVSVLRAVFGLLGIEQMEAAQGALRHGVLYDLLDREQDSTDLRSTSVQRLAS KFNSDAAQAQRVSRVSQHLFRMAGAGLPGEALERFQRKLQWAAQLHEIGSQISHSDYHKHGAYILDNADAPGFALPELHR LSLLVLGHRGKLRKLEVDFEDRVFVQQLLCLRMAVILCHARRDPDLKGLQLECSAEPGRIFVLNCRPGWAEAFPQSAHLL REEVLAWQKTPWTLIVSGL
Sequences:
>Translated_499_residues MQNGTLLAAVDLGSNSFRLEIGRLDHGRVHRTEYIKETVRQGNGLDGDRNLTPDAMQRGWDCLARFAERLAGFKKTQVRA VATQTLREARNREEFLAQAFRILEFPIDVISGSEEARLIYQGVAHLLPQSDERRLVVDIGGRSTEMILGKGFDARTMESY RVGSVAWSMKYFPDGQFTPRAFEMAEIAAKAVLDEAVNAYQPGVWDVAYGSSGTIGAVSDVLTAAGWPAGLVTRDGLDWL LDRLLKAQHADRVKLDGMKDDRRAVIGGGVSVLRAVFGLLGIEQMEAAQGALRHGVLYDLLDREQDSTDLRSTSVQRLAS KFNSDAAQAQRVSRVSQHLFRMAGAGLPGEALERFQRKLQWAAQLHEIGSQISHSDYHKHGAYILDNADAPGFALPELHR LSLLVLGHRGKLRKLEVDFEDRVFVQQLLCLRMAVILCHARRDPDLKGLQLECSAEPGRIFVLNCRPGWAEAFPQSAHLL REEVLAWQKTPWTLIVSGL >Mature_499_residues MQNGTLLAAVDLGSNSFRLEIGRLDHGRVHRTEYIKETVRQGNGLDGDRNLTPDAMQRGWDCLARFAERLAGFKKTQVRA VATQTLREARNREEFLAQAFRILEFPIDVISGSEEARLIYQGVAHLLPQSDERRLVVDIGGRSTEMILGKGFDARTMESY RVGSVAWSMKYFPDGQFTPRAFEMAEIAAKAVLDEAVNAYQPGVWDVAYGSSGTIGAVSDVLTAAGWPAGLVTRDGLDWL LDRLLKAQHADRVKLDGMKDDRRAVIGGGVSVLRAVFGLLGIEQMEAAQGALRHGVLYDLLDREQDSTDLRSTSVQRLAS KFNSDAAQAQRVSRVSQHLFRMAGAGLPGEALERFQRKLQWAAQLHEIGSQISHSDYHKHGAYILDNADAPGFALPELHR LSLLVLGHRGKLRKLEVDFEDRVFVQQLLCLRMAVILCHARRDPDLKGLQLECSAEPGRIFVLNCRPGWAEAFPQSAHLL REEVLAWQKTPWTLIVSGL
Specific function: Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate [H]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI1788848, Length=440, Percent_Identity=37.5, Blast_Score=294, Evalue=1e-80, Organism=Escherichia coli, GI48994966, Length=499, Percent_Identity=36.0721442885772, Blast_Score=272, Evalue=4e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022371 - InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: =3.6.1.11 [H]
Molecular weight: Translated: 55498; Mature: 55498
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNGTLLAAVDLGSNSFRLEIGRLDHGRVHRTEYIKETVRQGNGLDGDRNLTPDAMQRGW CCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH DCLARFAERLAGFKKTQVRAVATQTLREARNREEFLAQAFRILEFPIDVISGSEEARLIY HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH QGVAHLLPQSDERRLVVDIGGRSTEMILGKGFDARTMESYRVGSVAWSMKYFPDGQFTPR HHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHCCCCEEEEEEECCCCCCCCH AFEMAEIAAKAVLDEAVNAYQPGVWDVAYGSSGTIGAVSDVLTAAGWPAGLVTRDGLDWL HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH LDRLLKAQHADRVKLDGMKDDRRAVIGGGVSVLRAVFGLLGIEQMEAAQGALRHGVLYDL HHHHHHHHCCCCEEECCCCCCCHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH LDREQDSTDLRSTSVQRLASKFNSDAAQAQRVSRVSQHLFRMAGAGLPGEALERFQRKLQ HCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH WAAQLHEIGSQISHSDYHKHGAYILDNADAPGFALPELHRLSLLVLGHRGKLRKLEVDFE HHHHHHHHHHHHCCCHHHHCCCEEEECCCCCCCCCCHHHHHEEEEECCCCCCEEEECCHH DRVFVQQLLCLRMAVILCHARRDPDLKGLQLECSAEPGRIFVLNCRPGWAEAFPQSAHLL HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEECCCCHHHHCCHHHHHH REEVLAWQKTPWTLIVSGL HHHHHHHCCCCCEEEEECC >Mature Secondary Structure MQNGTLLAAVDLGSNSFRLEIGRLDHGRVHRTEYIKETVRQGNGLDGDRNLTPDAMQRGW CCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH DCLARFAERLAGFKKTQVRAVATQTLREARNREEFLAQAFRILEFPIDVISGSEEARLIY HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH QGVAHLLPQSDERRLVVDIGGRSTEMILGKGFDARTMESYRVGSVAWSMKYFPDGQFTPR HHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHCCCCEEEEEEECCCCCCCCH AFEMAEIAAKAVLDEAVNAYQPGVWDVAYGSSGTIGAVSDVLTAAGWPAGLVTRDGLDWL HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH LDRLLKAQHADRVKLDGMKDDRRAVIGGGVSVLRAVFGLLGIEQMEAAQGALRHGVLYDL HHHHHHHHCCCCEEECCCCCCCHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH LDREQDSTDLRSTSVQRLASKFNSDAAQAQRVSRVSQHLFRMAGAGLPGEALERFQRKLQ HCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH WAAQLHEIGSQISHSDYHKHGAYILDNADAPGFALPELHRLSLLVLGHRGKLRKLEVDFE HHHHHHHHHHHHCCCHHHHCCCEEEECCCCCCCCCCHHHHHEEEEECCCCCCEEEECCHH DRVFVQQLLCLRMAVILCHARRDPDLKGLQLECSAEPGRIFVLNCRPGWAEAFPQSAHLL HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEECCCCHHHHCCHHHHHH REEVLAWQKTPWTLIVSGL HHHHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10382967; 10984043 [H]