| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91788119
Identifier: 91788119
GI number: 91788119
Start: 2335004
End: 2335438
Strand: Reverse
Name: 91788119
Synonym: Bpro_2248
Alternate gene names: NA
Gene position: 2335438-2335004 (Counterclockwise)
Preceding gene: 91788120
Following gene: 91788112
Centisome position: 44.91
GC content: 60.23
Gene sequence:
>435_bases ATGGCAACCACAAAGAAAGCCTCGCCCGCCCCGGCGCGAAAAACCCCGGCCAAGCCAAACGCAGCAAAACCTGAACTGAA AAAGTCACCCGTCCGAAAAGCCGTCACGGGCAAGGCCCCCTCCCCCACGCCCGTTGCCAAAAAAGCGGGCGCCAAAGCGC CGCTGCCCAAGGTCCTGCCGGCAACGACGCCTGAAAAGGCAGCCAAGCCCAAGAAACCCAAACTGGTACGCGACAGCTTT ACCATTCCCAAAGCCGAATACCTGGTGCTTGAGGGTCTCAAACAGCGTGCAGCCCAATTAACCCGCCCGGCCAAAAAAAG CGAAGTGCTGCGTGCCGGCATCAAAGCCCTGGCAGCCCTGTCCGATGCCGCCTTCCTGATGGCGCTGGAGCAGGTTCCAG CCATCAAGACTGGCCGCCCTGCCCTAAAAATATAG
Upstream 100 bases:
>100_bases ACAGCAGGAACCCTGTGGCAGCCAGGAGGCTTGACGGTTCATTTTCAAACGATATAAACTATATATACGGTTTATATCGT TTATTGAAAAGGACATTCTC
Downstream 100 bases:
>100_bases CCACAGCAAAAGAGGTTTTTACCGGGGGCTTCCAGAAATTCAATTATCGGGATGCAGGGCAAGGCGCACGAAGCGCAGGA ACCGGAATGCACTTGGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MATTKKASPAPARKTPAKPNAAKPELKKSPVRKAVTGKAPSPTPVAKKAGAKAPLPKVLPATTPEKAAKPKKPKLVRDSF TIPKAEYLVLEGLKQRAAQLTRPAKKSEVLRAGIKALAALSDAAFLMALEQVPAIKTGRPALKI
Sequences:
>Translated_144_residues MATTKKASPAPARKTPAKPNAAKPELKKSPVRKAVTGKAPSPTPVAKKAGAKAPLPKVLPATTPEKAAKPKKPKLVRDSF TIPKAEYLVLEGLKQRAAQLTRPAKKSEVLRAGIKALAALSDAAFLMALEQVPAIKTGRPALKI >Mature_143_residues ATTKKASPAPARKTPAKPNAAKPELKKSPVRKAVTGKAPSPTPVAKKAGAKAPLPKVLPATTPEKAAKPKKPKLVRDSFT IPKAEYLVLEGLKQRAAQLTRPAKKSEVLRAGIKALAALSDAAFLMALEQVPAIKTGRPALKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15094; Mature: 14963
Theoretical pI: Translated: 11.56; Mature: 11.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTKKASPAPARKTPAKPNAAKPELKKSPVRKAVTGKAPSPTPVAKKAGAKAPLPKVLP CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCC ATTPEKAAKPKKPKLVRDSFTIPKAEYLVLEGLKQRAAQLTRPAKKSEVLRAGIKALAAL CCCCHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH SDAAFLMALEQVPAIKTGRPALKI HHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure ATTKKASPAPARKTPAKPNAAKPELKKSPVRKAVTGKAPSPTPVAKKAGAKAPLPKVLP CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCC ATTPEKAAKPKKPKLVRDSFTIPKAEYLVLEGLKQRAAQLTRPAKKSEVLRAGIKALAAL CCCCHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH SDAAFLMALEQVPAIKTGRPALKI HHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA