| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788121
Identifier: 91788121
GI number: 91788121
Start: 2337112
End: 2338257
Strand: Reverse
Name: 91788121
Synonym: Bpro_2250
Alternate gene names: NA
Gene position: 2338257-2337112 (Counterclockwise)
Preceding gene: 91788122
Following gene: 91788120
Centisome position: 44.96
GC content: 63.26
Gene sequence:
>1146_bases ATGCCTTTACAAAGTCCAGCCATCAGCCGTCGCCAACTGCTGCAAGGTGCCAGCATGCTGACTGCCGGTGCTGTAGCACC AGGCTGGGCGCAGCCTGGCAAAGCGGCTGCATCACGCGCTGTCGTCGTTGCGCAGGTTGTTGACTTCTCACAAGCGCAAC AGGACGTGTCAAAAGATTTCCTGATCGGGTCACGCGCCGCCTGGCAGGACATCAACTCTCGGGGGGGCATACGCGGCCGA CAGGTGCAGCATCTTGCGCTCGAAACGGACGGCACACCAGCCAGCCTGCGCGCGGCCCTCGACTCGGTCCGGGACAATCC ATCCTGCGTTGTCCTCTCCGGCAGTGTCGGCGACCAGATCGCCAGCCAGATCGCCACCCCGTCGCGCCAGGGGGGTCTGG ATATTGCTCACGCAGCGCCCTGGCTGCAAAACTCCAGCCTCGAAATCGATGACAAGACGTTCCCGATTTTCGCGGCGCGC CAGGAACAGATCGCCTACGCGCTTAAAACCCTGTCGGTCATGGGTCTGAAAGAGCTGGGCGCGATTTATGCGACGGCCAA GGACCACGCGGCCTACCGCGTCGAGGTCGAACGCATTGCTGCCGGCATGCAGCTCAAGCTGCAGTCGTTTCAGGGCGACG GGGACTTGCGTCTGCTCGGCCAGAAGCTGACACCCGGCACGCCGGCTGTACTTCTTTTTGTGGGTGGCACGCCCGAACTT GCCGCCTTCACGCAAGGACTGGAAAAGCAGGCGCGCCAGCGCTACGTCGTCGCGCTGGCCGACGTCAACCTGCAGACCAT GCTGCAAATGGGGGCGGCGCGCAGCACGCCGGTCATTGCGACCCAGCCGGTGCCGCTGGTCAATGCCAGCCTCCCGGTGG TCAGAAGCTACCGCGAAACACTGGCACGCCTGTTTGATGAGCCCCCGGCCCCGCTGAGCCTGGCCGGCTTCATTGCCGCC AGATACACCTATGAAGTGCTCAATGACATGGATGGCCCGCTGACACGCCAAAGCGCGTTGGCCGCCTTTCAGCGGCGCTC CAGCCTGGACATCGGCGGGTTTCGCGTCAGTTTCAACCCGCAGCGCAGGAGCGGCAGCTATGTCACGCAAAGCATGATGA CGATAGATGGCCGGCTGATTGGCTAA
Upstream 100 bases:
>100_bases CTCTTTCAGGTCAACGCCCTTTCTGAAGCGCGTTGACCGCTACAAATTCAATAGCACTTTAAACCGGACGGCGGGAACTG CACCGCCTGGGGATTCATTC
Downstream 100 bases:
>100_bases GCAGCAGGAATGCCGGGGTGAGTGCCGATGCCCGCGTGAATGCTATGCTGGGCCCGGACAAAGAAACTCAGACATGCAAA ACGGAACACTGCTCGCGGCT
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: ABC Branched-Chain Amino Acid Transporters
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MPLQSPAISRRQLLQGASMLTAGAVAPGWAQPGKAAASRAVVVAQVVDFSQAQQDVSKDFLIGSRAAWQDINSRGGIRGR QVQHLALETDGTPASLRAALDSVRDNPSCVVLSGSVGDQIASQIATPSRQGGLDIAHAAPWLQNSSLEIDDKTFPIFAAR QEQIAYALKTLSVMGLKELGAIYATAKDHAAYRVEVERIAAGMQLKLQSFQGDGDLRLLGQKLTPGTPAVLLFVGGTPEL AAFTQGLEKQARQRYVVALADVNLQTMLQMGAARSTPVIATQPVPLVNASLPVVRSYRETLARLFDEPPAPLSLAGFIAA RYTYEVLNDMDGPLTRQSALAAFQRRSSLDIGGFRVSFNPQRRSGSYVTQSMMTIDGRLIG
Sequences:
>Translated_381_residues MPLQSPAISRRQLLQGASMLTAGAVAPGWAQPGKAAASRAVVVAQVVDFSQAQQDVSKDFLIGSRAAWQDINSRGGIRGR QVQHLALETDGTPASLRAALDSVRDNPSCVVLSGSVGDQIASQIATPSRQGGLDIAHAAPWLQNSSLEIDDKTFPIFAAR QEQIAYALKTLSVMGLKELGAIYATAKDHAAYRVEVERIAAGMQLKLQSFQGDGDLRLLGQKLTPGTPAVLLFVGGTPEL AAFTQGLEKQARQRYVVALADVNLQTMLQMGAARSTPVIATQPVPLVNASLPVVRSYRETLARLFDEPPAPLSLAGFIAA RYTYEVLNDMDGPLTRQSALAAFQRRSSLDIGGFRVSFNPQRRSGSYVTQSMMTIDGRLIG >Mature_380_residues PLQSPAISRRQLLQGASMLTAGAVAPGWAQPGKAAASRAVVVAQVVDFSQAQQDVSKDFLIGSRAAWQDINSRGGIRGRQ VQHLALETDGTPASLRAALDSVRDNPSCVVLSGSVGDQIASQIATPSRQGGLDIAHAAPWLQNSSLEIDDKTFPIFAARQ EQIAYALKTLSVMGLKELGAIYATAKDHAAYRVEVERIAAGMQLKLQSFQGDGDLRLLGQKLTPGTPAVLLFVGGTPELA AFTQGLEKQARQRYVVALADVNLQTMLQMGAARSTPVIATQPVPLVNASLPVVRSYRETLARLFDEPPAPLSLAGFIAAR YTYEVLNDMDGPLTRQSALAAFQRRSSLDIGGFRVSFNPQRRSGSYVTQSMMTIDGRLIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40740; Mature: 40609
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLQSPAISRRQLLQGASMLTAGAVAPGWAQPGKAAASRAVVVAQVVDFSQAQQDVSKDF CCCCCCCHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LIGSRAAWQDINSRGGIRGRQVQHLALETDGTPASLRAALDSVRDNPSCVVLSGSVGDQI HCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCHHHHH ASQIATPSRQGGLDIAHAAPWLQNSSLEIDDKTFPIFAARQEQIAYALKTLSVMGLKELG HHHHCCCCCCCCCCHHHCCCCCCCCCCEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH AIYATAKDHAAYRVEVERIAAGMQLKLQSFQGDGDLRLLGQKLTPGTPAVLLFVGGTPEL HHEEECCCCCEEEEEHHHHHCCCEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCHH AAFTQGLEKQARQRYVVALADVNLQTMLQMGAARSTPVIATQPVPLVNASLPVVRSYRET HHHHHHHHHHHHHEEEEEEECCCHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHH LARLFDEPPAPLSLAGFIAARYTYEVLNDMDGPLTRQSALAAFQRRSSLDIGGFRVSFNP HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECC QRRSGSYVTQSMMTIDGRLIG CCCCCCHHHHHHHHCCCEECC >Mature Secondary Structure PLQSPAISRRQLLQGASMLTAGAVAPGWAQPGKAAASRAVVVAQVVDFSQAQQDVSKDF CCCCCCHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LIGSRAAWQDINSRGGIRGRQVQHLALETDGTPASLRAALDSVRDNPSCVVLSGSVGDQI HCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCHHHHH ASQIATPSRQGGLDIAHAAPWLQNSSLEIDDKTFPIFAARQEQIAYALKTLSVMGLKELG HHHHCCCCCCCCCCHHHCCCCCCCCCCEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH AIYATAKDHAAYRVEVERIAAGMQLKLQSFQGDGDLRLLGQKLTPGTPAVLLFVGGTPEL HHEEECCCCCEEEEEHHHHHCCCEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCHH AAFTQGLEKQARQRYVVALADVNLQTMLQMGAARSTPVIATQPVPLVNASLPVVRSYRET HHHHHHHHHHHHHEEEEEEECCCHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHH LARLFDEPPAPLSLAGFIAARYTYEVLNDMDGPLTRQSALAAFQRRSSLDIGGFRVSFNP HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECC QRRSGSYVTQSMMTIDGRLIG CCCCCCHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA