Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is pheT [H]

Identifier: 91787980

GI number: 91787980

Start: 2195672

End: 2198098

Strand: Direct

Name: pheT [H]

Synonym: Bpro_2107

Alternate gene names: 91787980

Gene position: 2195672-2198098 (Clockwise)

Preceding gene: 91787979

Following gene: 91787981

Centisome position: 42.22

GC content: 63.25

Gene sequence:

>2427_bases
ATGCAATTCCCAGAATCCTGGTTGCGCGAATTCTGCAATCCGCCGCTCAATACCCAGCAGCTCGCTGAAACCCTGACCAT
GGCCGGTCTTGAAGTTGAAGAGCTCAAGCCGGTGGCGCCGCCTTTCACCAAAATCGTCGTGGGTGAAATCAGGGAAGCCG
CCCAGCATCCCAACGCGGACCGCCTTCGCATCTGCCAGGTGGATGTGGGCCAGGGCAGCCTGCTCACTATCGTCTGCGGT
GCGCCCAATGCCCGTGTGGGCATCAAGGTGCCATGCGCGCTGGTCGGTGCTGAATTGCCGCCCGGCGAAGACGGCAAGCC
TTTCCTGATCAAAGTCGGCACACTGCGTGGCGTGGAAAGCCAGGGCATGCTGTGCTCGGCGCGCGAACTCAAGCTTTCGG
AAGACCATGGCGGTTTGCTCGAGCTGGCCGCAGATGCGCCCCTGGGTCAGGACATCCGCGAGCACCTGCAACTCGATGAC
ACGTTGTTCACCCTCAAGCTCACGCCCAATCTGGCACATTGCCTGAGCGTCTACGGCGTCGCGCGTGAAGTCGCTGCCTT
GACGGGTGCGCCCCTCAAGGCGCCGGCTTTTCCCGCTGTGCCGGTAGCCGATGCGACCCAATTACCCGTCAAAATCAGTG
CGCCGGATTTGTGTGGCCGCTTCTCGGGCCGCGTGGTGCGTAACGTCAATACCCAGGCTGCCACTCCGTCATGGATGGTG
GACCGCCTGGCGCGTTGCGGCCAGCGCAGCGTGACGGCATTGGTGGATATTTCCAACTATGTGATGTTCGAGCTGGGCCG
TCCCTCGCATATTTTTGACCTCGACAAGATCCATGGCGGGCTTGACGTCCGCTGGGGCAAAGCCGGCGAGACGCTGAAGC
TGCTCAATGGCAACACGGTGACGGTGGACGAGAAGGTCGGCGTGATTGCCGATGACGTACAGGTCGAATCCCTGGCCGGC
ATCATGGGCGGCGATGCGACCGCCGTGTCGGACGACACGAAGCATGTGTATGTCGAGGCCGCCTTCTGGTGGCCCAAGGC
CATCGCCGGCCGTTCACGCCGCTACAACTTTTCCACCGATGCCGGCCACCGCTTTGAACGCGGTGTGGACCCGGGCTGCA
CCGTGGAGCACATCGAACGCATCAGCCAGCTGATCATCGACATTTGCGGCACGCCCGAGACGGTGTGCGGCCCCATGAAC
GATGCGCAGGTCAACCTGCCCCAGCCCACGCCCGTGACCATGCGCGTGGCGCGCGCGGCCAAGGTGATTGGTATGCCGCT
CACGCAGGCGCAATGCCTGGATGTGCTTCAACGCCTGGGCCTGCCGGTGGCGCAAGGCGAGGGTACGCTGACGGTGACAC
CGCCCAGCTATCGCTTCGATCTGCAGATCGAGGAAGACCTCATTGAAGAGGTGGTGCGCATGGTGGGCTACAACGAGTTG
CCCGAGACGCCGCCGCTGGCGCCCATCACGGCCCGGATCCGGCCGGAAGCCGAACGCAGCCCGTTTGCCGTGCGCCGCGC
GCTGGCTTCGCTGGGCTATCAGGAGACGATCAATTTCAGCTTTGTGGAAGAGCGCTGGGAGCATGAGCTGGCCGGCAACC
CCAACCCCATCAAGCTGCTCAATCCCATTGCCAGCCAGATGAGCGTGATGCGCTCCTCGCTGCTGGGCTCCCTGCTGCAG
GTCCTCAAGTTCAACCTGGACCGCAAGGCTCCCCGGGTGAATGTTTTTGAGCTGGGTCGGGTGTTTCTGCGCGATGCGCA
AAGCCTGAACACCGACACGACGGTGGCCGGCTTCCACCAGCCCATGCGTGTGGCAGGCCTGGCTTATGGCCCGCGCGCCG
CGCTGCATTGGGGCCAGCCGGACAAGGCGGCGGACTTCTTCGACGTCAAGGGTGATGTCGAGGCCTTGCTGGCGCCATTG
CAGGCTGTTTTTGTACCCGCAACCCACCCCGCCATGCACCCTGGCCGTTGTGCCAGCGTGTCGGTGGCGGGCCGGCATAT
CGGCTTCGTCGGAGAACTTCATCCGCAGTGGCGGCAAGGTTATGAAGTGGCCCAGGCGCCCCTGTTGTTTGAGCTGGAGC
TCGACACCGTACTGCTGCGCCAGGTGCCTTCGTTCACACCGGTCAGCAAGCTGCAGCCCGTCGAGCGCGACATCGCCGTG
ATCGTTCAGGAAAGCGTCACGCATGCGGCGCTCATGGCGGCCGTTCATGGTGCCGACACGCGAGGCTTGCTCAAGGGTGC
TACGCTGTTTGATGTCTATCGGCCGCAGCAGGCCAGTGCCGGCATGCTGCTGGGCGAGAAGAGCCTTGCTGTGCGCTTGG
TGCTTTCCAGCGATGCCGCTACACTGACCGATGACGATATTGAAGCAGCCGTCCAGGCAGTGCTTGCCAATCTGCAGCAA
CAACTGCAGGCCCGTCTTCGTGCTTGA

Upstream 100 bases:

>100_bases
GCGCTACGGTGTGAATGACCTGCGCCTGTTCTTTGACGGCGACATCCGCTTCCTGTCCCAGTTCCAGTCATAACAACAAG
AAAAAGAACAAGGTAAGACC

Downstream 100 bases:

>100_bases
AGCGCGCATGCAGCCGCCACAAAAACAATAGCCGACTGGAGGATCGCCTCATGGAATTTTCTGTTGAAAGTCTGGAAACC
CCAGCGCTGACCAAAGCGCA

Product: phenylalanyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]

Number of amino acids: Translated: 808; Mature: 808

Protein sequence:

>808_residues
MQFPESWLREFCNPPLNTQQLAETLTMAGLEVEELKPVAPPFTKIVVGEIREAAQHPNADRLRICQVDVGQGSLLTIVCG
APNARVGIKVPCALVGAELPPGEDGKPFLIKVGTLRGVESQGMLCSARELKLSEDHGGLLELAADAPLGQDIREHLQLDD
TLFTLKLTPNLAHCLSVYGVAREVAALTGAPLKAPAFPAVPVADATQLPVKISAPDLCGRFSGRVVRNVNTQAATPSWMV
DRLARCGQRSVTALVDISNYVMFELGRPSHIFDLDKIHGGLDVRWGKAGETLKLLNGNTVTVDEKVGVIADDVQVESLAG
IMGGDATAVSDDTKHVYVEAAFWWPKAIAGRSRRYNFSTDAGHRFERGVDPGCTVEHIERISQLIIDICGTPETVCGPMN
DAQVNLPQPTPVTMRVARAAKVIGMPLTQAQCLDVLQRLGLPVAQGEGTLTVTPPSYRFDLQIEEDLIEEVVRMVGYNEL
PETPPLAPITARIRPEAERSPFAVRRALASLGYQETINFSFVEERWEHELAGNPNPIKLLNPIASQMSVMRSSLLGSLLQ
VLKFNLDRKAPRVNVFELGRVFLRDAQSLNTDTTVAGFHQPMRVAGLAYGPRAALHWGQPDKAADFFDVKGDVEALLAPL
QAVFVPATHPAMHPGRCASVSVAGRHIGFVGELHPQWRQGYEVAQAPLLFELELDTVLLRQVPSFTPVSKLQPVERDIAV
IVQESVTHAALMAAVHGADTRGLLKGATLFDVYRPQQASAGMLLGEKSLAVRLVLSSDAATLTDDDIEAAVQAVLANLQQ
QLQARLRA

Sequences:

>Translated_808_residues
MQFPESWLREFCNPPLNTQQLAETLTMAGLEVEELKPVAPPFTKIVVGEIREAAQHPNADRLRICQVDVGQGSLLTIVCG
APNARVGIKVPCALVGAELPPGEDGKPFLIKVGTLRGVESQGMLCSARELKLSEDHGGLLELAADAPLGQDIREHLQLDD
TLFTLKLTPNLAHCLSVYGVAREVAALTGAPLKAPAFPAVPVADATQLPVKISAPDLCGRFSGRVVRNVNTQAATPSWMV
DRLARCGQRSVTALVDISNYVMFELGRPSHIFDLDKIHGGLDVRWGKAGETLKLLNGNTVTVDEKVGVIADDVQVESLAG
IMGGDATAVSDDTKHVYVEAAFWWPKAIAGRSRRYNFSTDAGHRFERGVDPGCTVEHIERISQLIIDICGTPETVCGPMN
DAQVNLPQPTPVTMRVARAAKVIGMPLTQAQCLDVLQRLGLPVAQGEGTLTVTPPSYRFDLQIEEDLIEEVVRMVGYNEL
PETPPLAPITARIRPEAERSPFAVRRALASLGYQETINFSFVEERWEHELAGNPNPIKLLNPIASQMSVMRSSLLGSLLQ
VLKFNLDRKAPRVNVFELGRVFLRDAQSLNTDTTVAGFHQPMRVAGLAYGPRAALHWGQPDKAADFFDVKGDVEALLAPL
QAVFVPATHPAMHPGRCASVSVAGRHIGFVGELHPQWRQGYEVAQAPLLFELELDTVLLRQVPSFTPVSKLQPVERDIAV
IVQESVTHAALMAAVHGADTRGLLKGATLFDVYRPQQASAGMLLGEKSLAVRLVLSSDAATLTDDDIEAAVQAVLANLQQ
QLQARLRA
>Mature_808_residues
MQFPESWLREFCNPPLNTQQLAETLTMAGLEVEELKPVAPPFTKIVVGEIREAAQHPNADRLRICQVDVGQGSLLTIVCG
APNARVGIKVPCALVGAELPPGEDGKPFLIKVGTLRGVESQGMLCSARELKLSEDHGGLLELAADAPLGQDIREHLQLDD
TLFTLKLTPNLAHCLSVYGVAREVAALTGAPLKAPAFPAVPVADATQLPVKISAPDLCGRFSGRVVRNVNTQAATPSWMV
DRLARCGQRSVTALVDISNYVMFELGRPSHIFDLDKIHGGLDVRWGKAGETLKLLNGNTVTVDEKVGVIADDVQVESLAG
IMGGDATAVSDDTKHVYVEAAFWWPKAIAGRSRRYNFSTDAGHRFERGVDPGCTVEHIERISQLIIDICGTPETVCGPMN
DAQVNLPQPTPVTMRVARAAKVIGMPLTQAQCLDVLQRLGLPVAQGEGTLTVTPPSYRFDLQIEEDLIEEVVRMVGYNEL
PETPPLAPITARIRPEAERSPFAVRRALASLGYQETINFSFVEERWEHELAGNPNPIKLLNPIASQMSVMRSSLLGSLLQ
VLKFNLDRKAPRVNVFELGRVFLRDAQSLNTDTTVAGFHQPMRVAGLAYGPRAALHWGQPDKAADFFDVKGDVEALLAPL
QAVFVPATHPAMHPGRCASVSVAGRHIGFVGELHPQWRQGYEVAQAPLLFELELDTVLLRQVPSFTPVSKLQPVERDIAV
IVQESVTHAALMAAVHGADTRGLLKGATLFDVYRPQQASAGMLLGEKSLAVRLVLSSDAATLTDDDIEAAVQAVLANLQQ
QLQARLRA

Specific function: Unknown

COG id: COG0072

COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788006, Length=813, Percent_Identity=42.0664206642066, Blast_Score=618, Evalue=1e-178,

Paralogues:

None

Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005146
- InterPro:   IPR005147
- InterPro:   IPR009061
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004532
- InterPro:   IPR020825
- InterPro:   IPR005121
- InterPro:   IPR002547 [H]

Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]

EC number: =6.1.1.20 [H]

Molecular weight: Translated: 87538; Mature: 87538

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS50886 TRBD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFPESWLREFCNPPLNTQQLAETLTMAGLEVEELKPVAPPFTKIVVGEIREAAQHPNAD
CCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
RLRICQVDVGQGSLLTIVCGAPNARVGIKVPCALVGAELPPGEDGKPFLIKVGTLRGVES
CEEEEEEECCCCCEEEEEECCCCCCEEEECCHHEECCCCCCCCCCCEEEEEEECCCCCCC
QGMLCSARELKLSEDHGGLLELAADAPLGQDIREHLQLDDTLFTLKLTPNLAHCLSVYGV
CCCEEEHHHCEECCCCCCEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCHHHHHHHHHH
AREVAALTGAPLKAPAFPAVPVADATQLPVKISAPDLCGRFSGRVVRNVNTQAATPSWMV
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCCEEECCCCCCCCHHHHH
DRLARCGQRSVTALVDISNYVMFELGRPSHIFDLDKIHGGLDVRWGKAGETLKLLNGNTV
HHHHHCCCCCEEEEEEECCEEEEEECCCCCEEEHHHHCCCCEEEECCCCCEEEEECCCEE
TVDEKVGVIADDVQVESLAGIMGGDATAVSDDTKHVYVEAAFWWPKAIAGRSRRYNFSTD
EEECCCCEEECCCCHHHHHHHCCCCCEEECCCCCEEEEEEEEECHHHHCCCCCCCCCCCC
AGHRFERGVDPGCTVEHIERISQLIIDICGTPETVCGPMNDAQVNLPQPTPVTMRVARAA
CCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEECCCCCCHHHHHHHHH
KVIGMPLTQAQCLDVLQRLGLPVAQGEGTLTVTPPSYRFDLQIEEDLIEEVVRMVGYNEL
HHHCCCCCHHHHHHHHHHHCCCEECCCCEEEECCCCEEEEEEEHHHHHHHHHHHCCCCCC
PETPPLAPITARIRPEAERSPFAVRRALASLGYQETINFSFVEERWEHELAGNPNPIKLL
CCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCCCHHHH
NPIASQMSVMRSSLLGSLLQVLKFNLDRKAPRVNVFELGRVFLRDAQSLNTDTTVAGFHQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEHHCCC
PMRVAGLAYGPRAALHWGQPDKAADFFDVKGDVEALLAPLQAVFVPATHPAMHPGRCASV
CHHHHHCCCCCCCEEECCCCCCCCCEEECCCCHHHHHHHHHHEEECCCCCCCCCCCCCEE
SVAGRHIGFVGELHPQWRQGYEVAQAPLLFELELDTVLLRQVPSFTPVSKLQPVERDIAV
EECCCEECEECCCCHHHHCCHHHHCCCEEEEEEHHHHHHHHCCCCCCHHHCCCHHHHHHH
IVQESVTHAALMAAVHGADTRGLLKGATLFDVYRPQQASAGMLLGEKSLAVRLVLSSDAA
HHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEECCCCCCCCCEEEECCCEEEEEEEECCCC
TLTDDDIEAAVQAVLANLQQQLQARLRA
CCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQFPESWLREFCNPPLNTQQLAETLTMAGLEVEELKPVAPPFTKIVVGEIREAAQHPNAD
CCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
RLRICQVDVGQGSLLTIVCGAPNARVGIKVPCALVGAELPPGEDGKPFLIKVGTLRGVES
CEEEEEEECCCCCEEEEEECCCCCCEEEECCHHEECCCCCCCCCCCEEEEEEECCCCCCC
QGMLCSARELKLSEDHGGLLELAADAPLGQDIREHLQLDDTLFTLKLTPNLAHCLSVYGV
CCCEEEHHHCEECCCCCCEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCHHHHHHHHHH
AREVAALTGAPLKAPAFPAVPVADATQLPVKISAPDLCGRFSGRVVRNVNTQAATPSWMV
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCCEEECCCCCCCCHHHHH
DRLARCGQRSVTALVDISNYVMFELGRPSHIFDLDKIHGGLDVRWGKAGETLKLLNGNTV
HHHHHCCCCCEEEEEEECCEEEEEECCCCCEEEHHHHCCCCEEEECCCCCEEEEECCCEE
TVDEKVGVIADDVQVESLAGIMGGDATAVSDDTKHVYVEAAFWWPKAIAGRSRRYNFSTD
EEECCCCEEECCCCHHHHHHHCCCCCEEECCCCCEEEEEEEEECHHHHCCCCCCCCCCCC
AGHRFERGVDPGCTVEHIERISQLIIDICGTPETVCGPMNDAQVNLPQPTPVTMRVARAA
CCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEECCCCCCHHHHHHHHH
KVIGMPLTQAQCLDVLQRLGLPVAQGEGTLTVTPPSYRFDLQIEEDLIEEVVRMVGYNEL
HHHCCCCCHHHHHHHHHHHCCCEECCCCEEEECCCCEEEEEEEHHHHHHHHHHHCCCCCC
PETPPLAPITARIRPEAERSPFAVRRALASLGYQETINFSFVEERWEHELAGNPNPIKLL
CCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCCCHHHH
NPIASQMSVMRSSLLGSLLQVLKFNLDRKAPRVNVFELGRVFLRDAQSLNTDTTVAGFHQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEHHCCC
PMRVAGLAYGPRAALHWGQPDKAADFFDVKGDVEALLAPLQAVFVPATHPAMHPGRCASV
CHHHHHCCCCCCCEEECCCCCCCCCEEECCCCHHHHHHHHHHEEECCCCCCCCCCCCCEE
SVAGRHIGFVGELHPQWRQGYEVAQAPLLFELELDTVLLRQVPSFTPVSKLQPVERDIAV
EECCCEECEECCCCHHHHCCHHHHCCCEEEEEEHHHHHHHHCCCCCCHHHCCCHHHHHHH
IVQESVTHAALMAAVHGADTRGLLKGATLFDVYRPQQASAGMLLGEKSLAVRLVLSSDAA
HHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEECCCCCCCCCEEEECCCEEEEEEEECCCC
TLTDDDIEAAVQAVLANLQQQLQARLRA
CCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]