| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787962
Identifier: 91787962
GI number: 91787962
Start: 2174069
End: 2176561
Strand: Direct
Name: 91787962
Synonym: Bpro_2089
Alternate gene names: NA
Gene position: 2174069-2176561 (Clockwise)
Preceding gene: 91787960
Following gene: 91787963
Centisome position: 41.81
GC content: 58.04
Gene sequence:
>2493_bases ATGAAAGAAAAAGAACTTCGGTTGGCCGTTGTTTTCTTCGGCGGCGTATCGCTGGCGATTTACCAGCACGGTATTAATCG CGAAATCCTCAATCTGGTCAGAGCGTCAAAAATCTGCCACAGGGATAAATCCTATGAGGGCGATGAAAAATCAGCGTCCG CAGCGTCCGCAGCGTCTGGTTTTCATGACTATTACCCTGATGAGCCGGAAAGCTCGACCGGAGACGTTTACCTCGAATTT CTGGAAACCCTTGGGCGGGACGTTGATCTTCGGGTCATCGTCGACGTCATAGCGGGAGCCTCTGCGGGGGGCATCAACGG CGTGGCCCTGGCCACGGCGCTGGCCCATGACCTGAGTCTGGCGCCTGTCACGGACATGTGGCTGACCGACGCCGACATGC TCAATCTGCTGGCGCCCGAGGCCAGGGCGCGACTCTGGAGCAAGTGGTATTTTTGGCCGCTCATGCGCCCCTTGCTGACC CGGCTCGACCGCGAGGGCTTGCTACATGGGAAGGCCGACGCTGAAATGAAGGAGCGGGTCTCGGTTTTTCTGCGCTCTCG CTGGTTCAAGCCTCCGCTTGACGGTCGCCGCATGACCGCGCTGATGCTGGATGGCCTGGTGGCGATGGGGAAAACCGGCT CGGCTTCGGAGTCGCTGTTGCCCACGGGGGCAAGGCTTGACCTTCTGGTCACCGTGACCGATTTCAGAGGGCTGGACCGG CCCATCTTTATTCATGATCCGCCGGTTGCGCATGAAAGGGAGCATCGCCACGTTCTTCGCTTCAGCCTGGAGCATCGCAG AACCGGCCATCTGCAGAGCGACTTTGATGTTGATAATCTCCCGTCTCTTGCCTTTGCAGCCCGGGCATCGGCCTCGTACC CCGGGGCCTTTCCGCCAGCGCAGATCCGTGAGATCGACGACATTCTGGCCGAACGCCACAGGCCGTGGCCGGCGCGCACG CACTTCCTGGATCGCAATTTCCGGCGCTACCGTGAGCTGGGAGAAAATCCCGAAGACGCGGTACTGGTCGATGGCAGCGT TCTCGACAACAAGCCCATCATGGCCTGTGTGGAGGCCATCCGCACCCATGGCGCTTTCCGTGAAGTGGATCGCCGCCTCG TCTTCATAGACCCTCACCTCAGGCGCGAGAAAGCGGTGTCCGGCAATGGTGTTCCGGGTTTTTTCGCCACGTTGCGCGCG GCGCTCTCGGATCTGCCTCGCCACGATCCCGTTTACAACGAACTGGCAGTGATCAGCCGGTACAACCGGCAGGCCCGGCG CCTGAAGGCTGCCATCCTGGACGCGCGCTCCCATGTTGCGAAGATGATCGAGCAAGCGACCGCGGGGGGGCTCAAGGGCG AATTCACTGTCGATGACTTGCGGCACTGGCGGCTCTCATCCATCAACCTCCTGTCCGGTACAGCGATTGTCTATGACGCC TGGGTGCGTTCTCTGGTCCTTGAAGGGCTGGACTTCATCGTGCAGATCATTGTCAGCGCCTGTCAGTACGCTGCCGATTC GCGGGACGCGCGCCGGATCCAGGAGATTGTCGAGGCGTGGGCCAGAAATCAGGGGATCATCGCCGCTTCTTACTCCATGC CGGAACATGTTCATGAGTATTCCGAGTTGCCGAGCTTCGGAAAAATCATCGGGAATTTTGGCGTCATCTACAAAAAGAGG CGATTGAATTTTGTTCTGCATGAAATCAATGATCTTTATCAAAATATTTCAGGGGATGACTCCGGTGCGACCGATCCGCA GTCTCTCGATCTGTTGAAAATAAAAATACAAAAATGCATTGACGAGTTGTCGGTTTATGACGACATGAATTTTTTGAGTC GCCAGGCCGTCTCCATGTGCCGAAGGCTGTTCGTCGGCCGGTTTGCCCATGAAAAATTGAACATTGTTTCTGGCGCAGTT GATTTTCTTGGCAAGGAAGACCTTGATGAAATCTCAAAGCTGGTTGAAAGGCTGGGCCAGGAGTGCGACATGGAGCGGAC AATGGACAATACGGATGCCGTGCTGGCATCCCCCTTGCTCCTGCGTATGGCTGAGCGGTGCCGTGTTGCCATACTCACCG GCTATCTCGGCTACCTTTACTGGGACATCATCCTGCGCCCAACGGCCAGTGCCCTGTCATTGGACGCAGGTCCGATCGAC GAAATTCTGATCGACCGCATCAGCCCCGAAGATGCGACCACCCTCGCGCTCCCTGATCAGAAGAGTGTTCTGCAAGGCGG GTCATTCGCCGGCTTTGGCGGTTTTCTCAGCCGGTCGATCCGTGAAAATGACTATTTGTGGGGCCGGCTCCATGCGGTGG ACCGGCTCTTCGATATTCTGGAGAGCACGGTTCCGGCGAACAGACGCGGCGATTTCGATATCGCCGCCCTGAAAAAACGT GCGTTCGGAAAGGTGCTTGAGGAGGAGGCCAAGCGGCTCAGGTTCGTCCCGGAGCTGCTGGCCCAACTCGGGGAGGCCGT CGCACGCCTTTGA
Upstream 100 bases:
>100_bases TTTTACCGGCTGTTGCTTTTTTGGTCGCAGGGGGGCAGACTGATACGCGACGTAACGATTTCGCCACCCATTGCCAAGGG GGCTGAAAGCGAGCGCAGCG
Downstream 100 bases:
>100_bases CCCGGTCCCGATCCGTGGGCGCCATCGCCACCGCTTGTCGACCGTCCCCGTCCCCGTCCCGTCTGCTGGCGCCGGGGTGA CGTGAGGCGGGGACAGGGTT
Product: patatin
Products: NA
Alternate protein names: Patatin-Like Phospholipase; Patatin-Like Protein
Number of amino acids: Translated: 830; Mature: 830
Protein sequence:
>830_residues MKEKELRLAVVFFGGVSLAIYQHGINREILNLVRASKICHRDKSYEGDEKSASAASAASGFHDYYPDEPESSTGDVYLEF LETLGRDVDLRVIVDVIAGASAGGINGVALATALAHDLSLAPVTDMWLTDADMLNLLAPEARARLWSKWYFWPLMRPLLT RLDREGLLHGKADAEMKERVSVFLRSRWFKPPLDGRRMTALMLDGLVAMGKTGSASESLLPTGARLDLLVTVTDFRGLDR PIFIHDPPVAHEREHRHVLRFSLEHRRTGHLQSDFDVDNLPSLAFAARASASYPGAFPPAQIREIDDILAERHRPWPART HFLDRNFRRYRELGENPEDAVLVDGSVLDNKPIMACVEAIRTHGAFREVDRRLVFIDPHLRREKAVSGNGVPGFFATLRA ALSDLPRHDPVYNELAVISRYNRQARRLKAAILDARSHVAKMIEQATAGGLKGEFTVDDLRHWRLSSINLLSGTAIVYDA WVRSLVLEGLDFIVQIIVSACQYAADSRDARRIQEIVEAWARNQGIIAASYSMPEHVHEYSELPSFGKIIGNFGVIYKKR RLNFVLHEINDLYQNISGDDSGATDPQSLDLLKIKIQKCIDELSVYDDMNFLSRQAVSMCRRLFVGRFAHEKLNIVSGAV DFLGKEDLDEISKLVERLGQECDMERTMDNTDAVLASPLLLRMAERCRVAILTGYLGYLYWDIILRPTASALSLDAGPID EILIDRISPEDATTLALPDQKSVLQGGSFAGFGGFLSRSIRENDYLWGRLHAVDRLFDILESTVPANRRGDFDIAALKKR AFGKVLEEEAKRLRFVPELLAQLGEAVARL
Sequences:
>Translated_830_residues MKEKELRLAVVFFGGVSLAIYQHGINREILNLVRASKICHRDKSYEGDEKSASAASAASGFHDYYPDEPESSTGDVYLEF LETLGRDVDLRVIVDVIAGASAGGINGVALATALAHDLSLAPVTDMWLTDADMLNLLAPEARARLWSKWYFWPLMRPLLT RLDREGLLHGKADAEMKERVSVFLRSRWFKPPLDGRRMTALMLDGLVAMGKTGSASESLLPTGARLDLLVTVTDFRGLDR PIFIHDPPVAHEREHRHVLRFSLEHRRTGHLQSDFDVDNLPSLAFAARASASYPGAFPPAQIREIDDILAERHRPWPART HFLDRNFRRYRELGENPEDAVLVDGSVLDNKPIMACVEAIRTHGAFREVDRRLVFIDPHLRREKAVSGNGVPGFFATLRA ALSDLPRHDPVYNELAVISRYNRQARRLKAAILDARSHVAKMIEQATAGGLKGEFTVDDLRHWRLSSINLLSGTAIVYDA WVRSLVLEGLDFIVQIIVSACQYAADSRDARRIQEIVEAWARNQGIIAASYSMPEHVHEYSELPSFGKIIGNFGVIYKKR RLNFVLHEINDLYQNISGDDSGATDPQSLDLLKIKIQKCIDELSVYDDMNFLSRQAVSMCRRLFVGRFAHEKLNIVSGAV DFLGKEDLDEISKLVERLGQECDMERTMDNTDAVLASPLLLRMAERCRVAILTGYLGYLYWDIILRPTASALSLDAGPID EILIDRISPEDATTLALPDQKSVLQGGSFAGFGGFLSRSIRENDYLWGRLHAVDRLFDILESTVPANRRGDFDIAALKKR AFGKVLEEEAKRLRFVPELLAQLGEAVARL >Mature_830_residues MKEKELRLAVVFFGGVSLAIYQHGINREILNLVRASKICHRDKSYEGDEKSASAASAASGFHDYYPDEPESSTGDVYLEF LETLGRDVDLRVIVDVIAGASAGGINGVALATALAHDLSLAPVTDMWLTDADMLNLLAPEARARLWSKWYFWPLMRPLLT RLDREGLLHGKADAEMKERVSVFLRSRWFKPPLDGRRMTALMLDGLVAMGKTGSASESLLPTGARLDLLVTVTDFRGLDR PIFIHDPPVAHEREHRHVLRFSLEHRRTGHLQSDFDVDNLPSLAFAARASASYPGAFPPAQIREIDDILAERHRPWPART HFLDRNFRRYRELGENPEDAVLVDGSVLDNKPIMACVEAIRTHGAFREVDRRLVFIDPHLRREKAVSGNGVPGFFATLRA ALSDLPRHDPVYNELAVISRYNRQARRLKAAILDARSHVAKMIEQATAGGLKGEFTVDDLRHWRLSSINLLSGTAIVYDA WVRSLVLEGLDFIVQIIVSACQYAADSRDARRIQEIVEAWARNQGIIAASYSMPEHVHEYSELPSFGKIIGNFGVIYKKR RLNFVLHEINDLYQNISGDDSGATDPQSLDLLKIKIQKCIDELSVYDDMNFLSRQAVSMCRRLFVGRFAHEKLNIVSGAV DFLGKEDLDEISKLVERLGQECDMERTMDNTDAVLASPLLLRMAERCRVAILTGYLGYLYWDIILRPTASALSLDAGPID EILIDRISPEDATTLALPDQKSVLQGGSFAGFGGFLSRSIRENDYLWGRLHAVDRLFDILESTVPANRRGDFDIAALKKR AFGKVLEEEAKRLRFVPELLAQLGEAVARL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93061; Mature: 93061
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKELRLAVVFFGGVSLAIYQHGINREILNLVRASKICHRDKSYEGDEKSASAASAASG CCCCCEEEEEEEECCHHEEHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC FHDYYPDEPESSTGDVYLEFLETLGRDVDLRVIVDVIAGASAGGINGVALATALAHDLSL CCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC APVTDMWLTDADMLNLLAPEARARLWSKWYFWPLMRPLLTRLDREGLLHGKADAEMKERV CCCHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCHHHHHHH SVFLRSRWFKPPLDGRRMTALMLDGLVAMGKTGSASESLLPTGARLDLLVTVTDFRGLDR HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC PIFIHDPPVAHEREHRHVLRFSLEHRRTGHLQSDFDVDNLPSLAFAARASASYPGAFPPA CEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCH QIREIDDILAERHRPWPARTHFLDRNFRRYRELGENPEDAVLVDGSVLDNKPIMACVEAI HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHH RTHGAFREVDRRLVFIDPHLRREKAVSGNGVPGFFATLRAALSDLPRHDPVYNELAVISR HHCCHHHHHCCEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH YNRQARRLKAAILDARSHVAKMIEQATAGGLKGEFTVDDLRHWRLSSINLLSGTAIVYDA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEECCCHHHHHHH WVRSLVLEGLDFIVQIIVSACQYAADSRDARRIQEIVEAWARNQGIIAASYSMPEHVHEY HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH SELPSFGKIIGNFGVIYKKRRLNFVLHEINDLYQNISGDDSGATDPQSLDLLKIKIQKCI HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH DELSVYDDMNFLSRQAVSMCRRLFVGRFAHEKLNIVSGAVDFLGKEDLDEISKLVERLGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ECDMERTMDNTDAVLASPLLLRMAERCRVAILTGYLGYLYWDIILRPTASALSLDAGPID HCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHH EILIDRISPEDATTLALPDQKSVLQGGSFAGFGGFLSRSIRENDYLWGRLHAVDRLFDIL HHHHHCCCCCCCCEEECCCHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ESTVPANRRGDFDIAALKKRAFGKVLEEEAKRLRFVPELLAQLGEAVARL HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKEKELRLAVVFFGGVSLAIYQHGINREILNLVRASKICHRDKSYEGDEKSASAASAASG CCCCCEEEEEEEECCHHEEHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC FHDYYPDEPESSTGDVYLEFLETLGRDVDLRVIVDVIAGASAGGINGVALATALAHDLSL CCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC APVTDMWLTDADMLNLLAPEARARLWSKWYFWPLMRPLLTRLDREGLLHGKADAEMKERV CCCHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCHHHHHHH SVFLRSRWFKPPLDGRRMTALMLDGLVAMGKTGSASESLLPTGARLDLLVTVTDFRGLDR HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC PIFIHDPPVAHEREHRHVLRFSLEHRRTGHLQSDFDVDNLPSLAFAARASASYPGAFPPA CEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCH QIREIDDILAERHRPWPARTHFLDRNFRRYRELGENPEDAVLVDGSVLDNKPIMACVEAI HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHH RTHGAFREVDRRLVFIDPHLRREKAVSGNGVPGFFATLRAALSDLPRHDPVYNELAVISR HHCCHHHHHCCEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH YNRQARRLKAAILDARSHVAKMIEQATAGGLKGEFTVDDLRHWRLSSINLLSGTAIVYDA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEECCCHHHHHHH WVRSLVLEGLDFIVQIIVSACQYAADSRDARRIQEIVEAWARNQGIIAASYSMPEHVHEY HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH SELPSFGKIIGNFGVIYKKRRLNFVLHEINDLYQNISGDDSGATDPQSLDLLKIKIQKCI HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH DELSVYDDMNFLSRQAVSMCRRLFVGRFAHEKLNIVSGAVDFLGKEDLDEISKLVERLGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ECDMERTMDNTDAVLASPLLLRMAERCRVAILTGYLGYLYWDIILRPTASALSLDAGPID HCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHH EILIDRISPEDATTLALPDQKSVLQGGSFAGFGGFLSRSIRENDYLWGRLHAVDRLFDIL HHHHHCCCCCCCCEEECCCHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ESTVPANRRGDFDIAALKKRAFGKVLEEEAKRLRFVPELLAQLGEAVARL HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA